Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 ACA64.5-201ENST00000516207 127 ntBASIC1.53□□□□□ -2.16
GTF3C3Q9Y5Q9 Y_RNA.697-201ENST00000516776 113 ntBASIC1.53□□□□□ -2.16
GTF3C3Q9Y5Q9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.53□□□□□ -2.16
GTF3C3Q9Y5Q9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.53□□□□□ -2.16
GTF3C3Q9Y5Q9 AC008608.1-201ENST00000603910 127 ntBASIC1.53□□□□□ -2.16
GTF3C3Q9Y5Q9 SNORD100-201ENST00000408573 76 ntBASIC1.52□□□□□ -2.17
GTF3C3Q9Y5Q9 SNORA7.5-201ENST00000410672 110 ntBASIC1.52□□□□□ -2.17
GTF3C3Q9Y5Q9 RNU6-733P-201ENST00000410759 104 ntBASIC1.52□□□□□ -2.17
GTF3C3Q9Y5Q9 RNU6-548P-201ENST00000517083 115 ntBASIC1.51□□□□□ -2.17
GTF3C3Q9Y5Q9 AC013244.2-201ENST00000603396 103 ntBASIC1.51□□□□□ -2.17
GTF3C3Q9Y5Q9 RNU7-10P-201ENST00000607194 63 ntBASIC1.51□□□□□ -2.17
GTF3C3Q9Y5Q9 Y_RNA.174-201ENST00000363781 105 ntBASIC1.5□□□□□ -2.17
GTF3C3Q9Y5Q9 RNU6-1144P-201ENST00000384247 104 ntBASIC1.5□□□□□ -2.17
GTF3C3Q9Y5Q9 RNU6-110P-201ENST00000384508 104 ntBASIC1.5□□□□□ -2.17
GTF3C3Q9Y5Q9 RNU6-476P-201ENST00000384726 107 ntBASIC1.5□□□□□ -2.17
GTF3C3Q9Y5Q9 MIR4500-201ENST00000579472 76 ntBASIC1.5□□□□□ -2.17
GTF3C3Q9Y5Q9 SNORA63.5-201ENST00000363548 123 ntBASIC1.49□□□□□ -2.17
GTF3C3Q9Y5Q9 Y_RNA.360-201ENST00000365512 102 ntBASIC1.49□□□□□ -2.17
GTF3C3Q9Y5Q9 AC244098.3-201ENST00000424803 96 ntBASIC1.49□□□□□ -2.17
GTF3C3Q9Y5Q9 AC002350.1-201ENST00000490759 375 ntBASIC1.49□□□□□ -2.17
GTF3C3Q9Y5Q9 AC103810.9-201ENST00000606688 112 ntBASIC1.49□□□□□ -2.17
GTF3C3Q9Y5Q9 RNU6-1187P-201ENST00000364771 110 ntBASIC1.48□□□□□ -2.17
GTF3C3Q9Y5Q9 Y_RNA.536-201ENST00000384621 113 ntBASIC1.48□□□□□ -2.17
GTF3C3Q9Y5Q9 SNORA40.6-201ENST00000391153 128 ntBASIC1.48□□□□□ -2.17
GTF3C3Q9Y5Q9 AL591806.2-201ENST00000433122 173 ntBASIC1.48□□□□□ -2.17
GTF3C3Q9Y5Q9 MIR376B-201ENST00000614515 100 ntBASIC1.48□□□□□ -2.17
GTF3C3Q9Y5Q9 SNORA11.2-201ENST00000408318 127 ntBASIC1.47□□□□□ -2.17
GTF3C3Q9Y5Q9 MIR3612-201ENST00000579753 87 ntBASIC1.47□□□□□ -2.17
GTF3C3Q9Y5Q9 Y_RNA.56-201ENST00000362798 112 ntBASIC1.46□□□□□ -2.18
GTF3C3Q9Y5Q9 Y_RNA.281-201ENST00000364774 94 ntBASIC1.46□□□□□ -2.18
GTF3C3Q9Y5Q9 AC068339.1-201ENST00000526965 141 ntBASIC1.46□□□□□ -2.18
GTF3C3Q9Y5Q9 MIR548H5-201ENST00000580314 60 ntBASIC1.46□□□□□ -2.18
GTF3C3Q9Y5Q9 MIR3660-201ENST00000584845 100 ntBASIC1.46□□□□□ -2.18
GTF3C3Q9Y5Q9 MIR764-201ENST00000390811 85 ntBASIC1.45□□□□□ -2.18
GTF3C3Q9Y5Q9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
GTF3C3Q9Y5Q9 RNU6-1313P-201ENST00000362622 102 ntBASIC1.44□□□□□ -2.18
GTF3C3Q9Y5Q9 RNU1-17P-201ENST00000363022 152 ntBASIC1.44□□□□□ -2.18
GTF3C3Q9Y5Q9 Y_RNA.273-201ENST00000364703 102 ntBASIC1.44□□□□□ -2.18
GTF3C3Q9Y5Q9 RNU6-535P-201ENST00000384722 107 ntBASIC1.44□□□□□ -2.18
GTF3C3Q9Y5Q9 RNU6-469P-201ENST00000516253 101 ntBASIC1.44□□□□□ -2.18
GTF3C3Q9Y5Q9 MIR4295-201ENST00000585286 85 ntBASIC1.44□□□□□ -2.18
GTF3C3Q9Y5Q9 ZNF209P-201ENST00000593450 2304 ntBASIC1.43□□□□□ -2.18
GTF3C3Q9Y5Q9 RNU6-1307P-201ENST00000391012 103 ntBASIC1.43□□□□□ -2.18
GTF3C3Q9Y5Q9 MIR548I2-201ENST00000408348 149 ntBASIC1.43□□□□□ -2.18
GTF3C3Q9Y5Q9 RNA5SP222-201ENST00000411039 105 ntBASIC1.43□□□□□ -2.18
GTF3C3Q9Y5Q9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.43□□□□□ -2.18
GTF3C3Q9Y5Q9 PSMC1P5-201ENST00000512850 177 ntBASIC1.43□□□□□ -2.18
GTF3C3Q9Y5Q9 AC108729.3-201ENST00000513484 108 ntBASIC1.43□□□□□ -2.18
GTF3C3Q9Y5Q9 RNU6-135P-201ENST00000516769 101 ntBASIC1.43□□□□□ -2.18
GTF3C3Q9Y5Q9 Y_RNA.549-201ENST00000384657 102 ntBASIC1.42□□□□□ -2.18
GTF3C3Q9Y5Q9 MIR34C-201ENST00000384831 77 ntBASIC1.42□□□□□ -2.18
GTF3C3Q9Y5Q9 MIR5009-201ENST00000578736 100 ntBASIC1.42□□□□□ -2.18
GTF3C3Q9Y5Q9 MIR4303-201ENST00000581299 66 ntBASIC1.42□□□□□ -2.18
GTF3C3Q9Y5Q9 AC096720.1-201ENST00000604441 183 ntBASIC1.42□□□□□ -2.18
GTF3C3Q9Y5Q9 AL035470.1-201ENST00000622571 220 ntBASIC1.42□□□□□ -2.18
GTF3C3Q9Y5Q9 RNU6-679P-201ENST00000391003 106 ntBASIC1.41□□□□□ -2.18
GTF3C3Q9Y5Q9 MTND5P40-201ENST00000559945 246 ntBASIC1.41□□□□□ -2.18
GTF3C3Q9Y5Q9 Y_RNA.629-201ENST00000411368 105 ntBASIC1.4□□□□□ -2.19
GTF3C3Q9Y5Q9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
GTF3C3Q9Y5Q9 SNORD38.1-201ENST00000363863 68 ntBASIC1.39□□□□□ -2.19
GTF3C3Q9Y5Q9 MIR635-201ENST00000384830 98 ntBASIC1.39□□□□□ -2.19
GTF3C3Q9Y5Q9 MIR4653-201ENST00000585107 83 ntBASIC1.39□□□□□ -2.19
GTF3C3Q9Y5Q9 SNORD114-21-201ENST00000606412 72 ntBASIC1.39□□□□□ -2.19
GTF3C3Q9Y5Q9 HSBP1P2-201ENST00000299671 229 ntBASIC1.38□□□□□ -2.19
GTF3C3Q9Y5Q9 Y_RNA.35-201ENST00000362601 101 ntBASIC1.38□□□□□ -2.19
GTF3C3Q9Y5Q9 U8.6-201ENST00000364939 135 ntBASIC1.38□□□□□ -2.19
GTF3C3Q9Y5Q9 MIR605-201ENST00000385078 83 ntBASIC1.38□□□□□ -2.19
GTF3C3Q9Y5Q9 snoU13.23-201ENST00000458863 104 ntBASIC1.38□□□□□ -2.19
GTF3C3Q9Y5Q9 AC015712.3-201ENST00000559380 164 ntBASIC1.38□□□□□ -2.19
GTF3C3Q9Y5Q9 MIR18A-201ENST00000362310 71 ntBASIC1.37□□□□□ -2.19
GTF3C3Q9Y5Q9 Y_RNA.116-201ENST00000363292 103 ntBASIC1.37□□□□□ -2.19
GTF3C3Q9Y5Q9 RNU6-571P-201ENST00000384128 107 ntBASIC1.37□□□□□ -2.19
GTF3C3Q9Y5Q9 RNU6-291P-201ENST00000384720 107 ntBASIC1.37□□□□□ -2.19
GTF3C3Q9Y5Q9 SNORA17.3-201ENST00000391159 129 ntBASIC1.37□□□□□ -2.19
GTF3C3Q9Y5Q9 AC108210.2-201ENST00000503681 201 ntBASIC1.37□□□□□ -2.19
GTF3C3Q9Y5Q9 AC138907.6-201ENST00000568401 126 ntBASIC1.37□□□□□ -2.19
GTF3C3Q9Y5Q9 AC138869.1-201ENST00000568623 124 ntBASIC1.37□□□□□ -2.19
GTF3C3Q9Y5Q9 MIR4694-201ENST00000578534 80 ntBASIC1.37□□□□□ -2.19
GTF3C3Q9Y5Q9 AL442128.1-201ENST00000615151 90 ntBASIC1.37□□□□□ -2.19
GTF3C3Q9Y5Q9 uc_338.16-201ENST00000621804 95 ntBASIC1.37□□□□□ -2.19
GTF3C3Q9Y5Q9 RPL39P28-201ENST00000465655 155 ntBASIC1.36□□□□□ -2.19
GTF3C3Q9Y5Q9 RNU6-90P-201ENST00000606352 106 ntBASIC1.36□□□□□ -2.19
GTF3C3Q9Y5Q9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.36□□□□□ -2.19
GTF3C3Q9Y5Q9 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.35□□□□□ -2.19
GTF3C3Q9Y5Q9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.35□□□□□ -2.19
GTF3C3Q9Y5Q9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.35□□□□□ -2.19
GTF3C3Q9Y5Q9 RNU1-92P-201ENST00000517017 135 ntBASIC1.35□□□□□ -2.19
GTF3C3Q9Y5Q9 RNU6-1107P-201ENST00000364817 104 ntBASIC1.34□□□□□ -2.19
GTF3C3Q9Y5Q9 Y_RNA.323-201ENST00000365157 109 ntBASIC1.34□□□□□ -2.19
GTF3C3Q9Y5Q9 AL353997.5-201ENST00000618886 171 ntBASIC1.34□□□□□ -2.19
GTF3C3Q9Y5Q9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
GTF3C3Q9Y5Q9 Y_RNA.377-201ENST00000365644 108 ntBASIC1.33□□□□□ -2.2
GTF3C3Q9Y5Q9 SNORA36.2-201ENST00000384004 127 ntBASIC1.33□□□□□ -2.2
GTF3C3Q9Y5Q9 RNA5SP99-201ENST00000364020 114 ntBASIC1.32□□□□□ -2.2
GTF3C3Q9Y5Q9 Y_RNA.291-201ENST00000364886 113 ntBASIC1.32□□□□□ -2.2
GTF3C3Q9Y5Q9 RNU6-1201P-201ENST00000384227 107 ntBASIC1.32□□□□□ -2.2
GTF3C3Q9Y5Q9 RNU4-62P-201ENST00000410125 130 ntBASIC1.32□□□□□ -2.2
GTF3C3Q9Y5Q9 SPINT5P-201ENST00000448174 155 ntBASIC1.32□□□□□ -2.2
GTF3C3Q9Y5Q9 SNORA31.14-201ENST00000516728 116 ntBASIC1.32□□□□□ -2.2
GTF3C3Q9Y5Q9 MIR3678-201ENST00000578455 94 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms