Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 AC020891.4-201ENST00000605745 93 ntBASIC1.61□□□□□ -2.15
SF3B6Q9Y3B4 SNORD58A-201ENST00000383875 65 ntBASIC1.6□□□□□ -2.15
SF3B6Q9Y3B4 SNORA72.6-201ENST00000384520 129 ntBASIC1.6□□□□□ -2.15
SF3B6Q9Y3B4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.6□□□□□ -2.15
SF3B6Q9Y3B4 RNU7-21P-201ENST00000459430 62 ntBASIC1.6□□□□□ -2.15
SF3B6Q9Y3B4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SF3B6Q9Y3B4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.15
SF3B6Q9Y3B4 RNU6-934P-201ENST00000365154 107 ntBASIC1.59□□□□□ -2.15
SF3B6Q9Y3B4 SNORA80D-201ENST00000384488 135 ntBASIC1.59□□□□□ -2.15
SF3B6Q9Y3B4 MIR583-201ENST00000384846 75 ntBASIC1.59□□□□□ -2.15
SF3B6Q9Y3B4 MIR504-201ENST00000385065 83 ntBASIC1.59□□□□□ -2.15
SF3B6Q9Y3B4 RNU6-531P-201ENST00000516694 104 ntBASIC1.59□□□□□ -2.15
SF3B6Q9Y3B4 MIR4771-2-201ENST00000577758 74 ntBASIC1.59□□□□□ -2.15
SF3B6Q9Y3B4 MIR4771-1-201ENST00000582617 74 ntBASIC1.59□□□□□ -2.15
SF3B6Q9Y3B4 AC106800.4-201ENST00000614905 153 ntBASIC1.59□□□□□ -2.15
SF3B6Q9Y3B4 MIR181B2-201ENST00000385004 89 ntBASIC1.58□□□□□ -2.16
SF3B6Q9Y3B4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.58□□□□□ -2.16
SF3B6Q9Y3B4 SNORD79.1-201ENST00000516069 84 ntBASIC1.58□□□□□ -2.16
SF3B6Q9Y3B4 SNORA72.7-201ENST00000516349 94 ntBASIC1.58□□□□□ -2.16
SF3B6Q9Y3B4 AC104984.5-201ENST00000586878 94 ntBASIC1.58□□□□□ -2.16
SF3B6Q9Y3B4 SNORD111-201ENST00000408139 94 ntBASIC1.57□□□□□ -2.16
SF3B6Q9Y3B4 MIR1257-201ENST00000408490 117 ntBASIC1.57□□□□□ -2.16
SF3B6Q9Y3B4 RNU4-83P-201ENST00000410863 133 ntBASIC1.57□□□□□ -2.16
SF3B6Q9Y3B4 SNRPGP12-201ENST00000449481 213 ntBASIC1.57□□□□□ -2.16
SF3B6Q9Y3B4 RNU7-40P-201ENST00000516397 64 ntBASIC1.57□□□□□ -2.16
SF3B6Q9Y3B4 AC008163.1-202ENST00000636004 2889 ntBASIC1.57□□□□□ -2.16
SF3B6Q9Y3B4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SF3B6Q9Y3B4 SNORD116-10-201ENST00000363791 102 ntBASIC1.56□□□□□ -2.16
SF3B6Q9Y3B4 RNU6-850P-201ENST00000516934 103 ntBASIC1.56□□□□□ -2.16
SF3B6Q9Y3B4 SNORA70.22-201ENST00000517160 124 ntBASIC1.56□□□□□ -2.16
SF3B6Q9Y3B4 AC062037.1-201ENST00000605302 128 ntBASIC1.56□□□□□ -2.16
SF3B6Q9Y3B4 AC025521.1-201ENST00000621624 286 ntBASIC1.56□□□□□ -2.16
SF3B6Q9Y3B4 Y_RNA.17-201ENST00000362433 111 ntBASIC1.55□□□□□ -2.16
SF3B6Q9Y3B4 RNU4-58P-201ENST00000363192 141 ntBASIC1.55□□□□□ -2.16
SF3B6Q9Y3B4 RNU6-1125P-201ENST00000363601 107 ntBASIC1.55□□□□□ -2.16
SF3B6Q9Y3B4 RNU6-480P-201ENST00000384332 107 ntBASIC1.55□□□□□ -2.16
SF3B6Q9Y3B4 MIR1302-4-201ENST00000408701 150 ntBASIC1.55□□□□□ -2.16
SF3B6Q9Y3B4 Y_RNA.593-201ENST00000410292 98 ntBASIC1.55□□□□□ -2.16
SF3B6Q9Y3B4 RNY4P29-201ENST00000410801 97 ntBASIC1.55□□□□□ -2.16
SF3B6Q9Y3B4 RNU7-90P-201ENST00000459216 62 ntBASIC1.55□□□□□ -2.16
SF3B6Q9Y3B4 AL513043.2-201ENST00000573941 143 ntBASIC1.55□□□□□ -2.16
SF3B6Q9Y3B4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SF3B6Q9Y3B4 MIR494-201ENST00000349529 81 ntBASIC1.54□□□□□ -2.16
SF3B6Q9Y3B4 RNA5SP363-201ENST00000365072 115 ntBASIC1.54□□□□□ -2.16
SF3B6Q9Y3B4 RNU6-53P-201ENST00000365367 106 ntBASIC1.54□□□□□ -2.16
SF3B6Q9Y3B4 Y_RNA.388-201ENST00000383919 113 ntBASIC1.54□□□□□ -2.16
SF3B6Q9Y3B4 SNORA26.2-201ENST00000390922 122 ntBASIC1.54□□□□□ -2.16
SF3B6Q9Y3B4 RNU6-295P-201ENST00000516901 104 ntBASIC1.54□□□□□ -2.16
SF3B6Q9Y3B4 MIR6715A-201ENST00000615929 79 ntBASIC1.54□□□□□ -2.16
SF3B6Q9Y3B4 Y_RNA.13-201ENST00000362403 112 ntBASIC1.53□□□□□ -2.16
SF3B6Q9Y3B4 Y_RNA.57-201ENST00000362806 113 ntBASIC1.53□□□□□ -2.16
SF3B6Q9Y3B4 RNY1P10-201ENST00000363268 113 ntBASIC1.53□□□□□ -2.16
SF3B6Q9Y3B4 RNU6-571P-201ENST00000384128 107 ntBASIC1.53□□□□□ -2.16
SF3B6Q9Y3B4 MIR222-201ENST00000384992 110 ntBASIC1.53□□□□□ -2.16
SF3B6Q9Y3B4 MIR450A2-201ENST00000385022 100 ntBASIC1.53□□□□□ -2.16
SF3B6Q9Y3B4 SNORA40.18-201ENST00000391200 128 ntBASIC1.53□□□□□ -2.16
SF3B6Q9Y3B4 RNU6-994P-201ENST00000410507 111 ntBASIC1.53□□□□□ -2.16
SF3B6Q9Y3B4 RPS26P5-201ENST00000418544 335 ntBASIC1.53□□□□□ -2.16
SF3B6Q9Y3B4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SF3B6Q9Y3B4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SF3B6Q9Y3B4 MIR9-3-201ENST00000385084 90 ntBASIC1.52□□□□□ -2.17
SF3B6Q9Y3B4 MIR125B2-201ENST00000385128 89 ntBASIC1.52□□□□□ -2.17
SF3B6Q9Y3B4 U8.13-201ENST00000390842 128 ntBASIC1.52□□□□□ -2.17
SF3B6Q9Y3B4 SNORA26.9-201ENST00000391322 122 ntBASIC1.52□□□□□ -2.17
SF3B6Q9Y3B4 MIR1289-2-201ENST00000408360 111 ntBASIC1.52□□□□□ -2.17
SF3B6Q9Y3B4 AC013244.2-201ENST00000603396 103 ntBASIC1.52□□□□□ -2.17
SF3B6Q9Y3B4 MIR6082-201ENST00000613604 109 ntBASIC1.52□□□□□ -2.17
SF3B6Q9Y3B4 MIR8066-201ENST00000617280 78 ntBASIC1.52□□□□□ -2.17
SF3B6Q9Y3B4 MIR7843-201ENST00000622274 79 ntBASIC1.52□□□□□ -2.17
SF3B6Q9Y3B4 RNA5SP327-201ENST00000362494 101 ntBASIC1.51□□□□□ -2.17
SF3B6Q9Y3B4 Y_RNA.609-201ENST00000410669 89 ntBASIC1.51□□□□□ -2.17
SF3B6Q9Y3B4 RNU6-402P-201ENST00000410678 103 ntBASIC1.51□□□□□ -2.17
SF3B6Q9Y3B4 AC003989.2-201ENST00000440224 169 ntBASIC1.51□□□□□ -2.17
SF3B6Q9Y3B4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.51□□□□□ -2.17
SF3B6Q9Y3B4 MIR4676-201ENST00000583078 72 ntBASIC1.51□□□□□ -2.17
SF3B6Q9Y3B4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SF3B6Q9Y3B4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
SF3B6Q9Y3B4 SNORD116-22-201ENST00000384430 92 ntBASIC1.5□□□□□ -2.17
SF3B6Q9Y3B4 RNY1P4-201ENST00000384595 115 ntBASIC1.5□□□□□ -2.17
SF3B6Q9Y3B4 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
SF3B6Q9Y3B4 RNU6-267P-201ENST00000516714 103 ntBASIC1.5□□□□□ -2.17
SF3B6Q9Y3B4 RNU6-548P-201ENST00000517083 115 ntBASIC1.5□□□□□ -2.17
SF3B6Q9Y3B4 RNU7-156P-201ENST00000517214 74 ntBASIC1.5□□□□□ -2.17
SF3B6Q9Y3B4 MIR4781-201ENST00000585250 76 ntBASIC1.5□□□□□ -2.17
SF3B6Q9Y3B4 RNU6-369P-201ENST00000362515 102 ntBASIC1.49□□□□□ -2.17
SF3B6Q9Y3B4 MIR4668-201ENST00000582284 70 ntBASIC1.49□□□□□ -2.17
SF3B6Q9Y3B4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SF3B6Q9Y3B4 MIR101-2-201ENST00000362195 79 ntBASIC1.48□□□□□ -2.17
SF3B6Q9Y3B4 SNORA25-201ENST00000384384 134 ntBASIC1.48□□□□□ -2.17
SF3B6Q9Y3B4 MIR516A2-201ENST00000384888 90 ntBASIC1.48□□□□□ -2.17
SF3B6Q9Y3B4 MIR516A1-201ENST00000385033 90 ntBASIC1.48□□□□□ -2.17
SF3B6Q9Y3B4 SNORD100-201ENST00000408573 76 ntBASIC1.48□□□□□ -2.17
SF3B6Q9Y3B4 AC002429.1-201ENST00000437672 148 ntBASIC1.48□□□□□ -2.17
SF3B6Q9Y3B4 RN7SKP12-201ENST00000516275 143 ntBASIC1.48□□□□□ -2.17
SF3B6Q9Y3B4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.48□□□□□ -2.17
SF3B6Q9Y3B4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SF3B6Q9Y3B4 Y_RNA.42-201ENST00000362660 108 ntBASIC1.47□□□□□ -2.17
SF3B6Q9Y3B4 RNU6-364P-201ENST00000384387 107 ntBASIC1.47□□□□□ -2.17
SF3B6Q9Y3B4 SNORD12-201ENST00000391002 90 ntBASIC1.47□□□□□ -2.17
SF3B6Q9Y3B4 AL591806.2-201ENST00000433122 173 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 202.8 ms