Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 SNORA2B-201ENST00000384583 137 ntBASIC1.9□□□□□ -2.11
SPG7Q9UQ90 RNY4P30-201ENST00000410216 95 ntBASIC1.9□□□□□ -2.11
SPG7Q9UQ90 Y_RNA.659-201ENST00000515994 113 ntBASIC1.9□□□□□ -2.11
SPG7Q9UQ90 RNU6-970P-201ENST00000516312 107 ntBASIC1.9□□□□□ -2.11
SPG7Q9UQ90 RNA5SP61-201ENST00000516453 100 ntBASIC1.9□□□□□ -2.11
SPG7Q9UQ90 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.9□□□□□ -2.11
SPG7Q9UQ90 SNORA75.2-201ENST00000391138 150 ntBASIC1.89□□□□□ -2.11
SPG7Q9UQ90 SNORA75.3-201ENST00000391231 150 ntBASIC1.89□□□□□ -2.11
SPG7Q9UQ90 RPS29P28-201ENST00000446439 141 ntBASIC1.89□□□□□ -2.11
SPG7Q9UQ90 RNU6-795P-201ENST00000516323 103 ntBASIC1.89□□□□□ -2.11
SPG7Q9UQ90 MIR3122-201ENST00000577243 73 ntBASIC1.89□□□□□ -2.11
SPG7Q9UQ90 AC096720.1-201ENST00000604441 183 ntBASIC1.89□□□□□ -2.11
SPG7Q9UQ90 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
SPG7Q9UQ90 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SPG7Q9UQ90 Y_RNA.93-201ENST00000363066 109 ntBASIC1.88□□□□□ -2.11
SPG7Q9UQ90 Y_RNA.98-201ENST00000363109 102 ntBASIC1.88□□□□□ -2.11
SPG7Q9UQ90 Y_RNA.247-201ENST00000364500 92 ntBASIC1.88□□□□□ -2.11
SPG7Q9UQ90 Y_RNA.363-201ENST00000365529 113 ntBASIC1.88□□□□□ -2.11
SPG7Q9UQ90 MT-TF-201ENST00000387314 71 ntBASIC1.88□□□□□ -2.11
SPG7Q9UQ90 AC012531.4-201ENST00000616509 177 ntBASIC1.88□□□□□ -2.11
SPG7Q9UQ90 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SPG7Q9UQ90 Y_RNA.168-201ENST00000363740 102 ntBASIC1.87□□□□□ -2.11
SPG7Q9UQ90 SNORD45B-201ENST00000364617 72 ntBASIC1.87□□□□□ -2.11
SPG7Q9UQ90 RNU6-580P-201ENST00000365159 107 ntBASIC1.87□□□□□ -2.11
SPG7Q9UQ90 RNU6-42P-201ENST00000384165 107 ntBASIC1.87□□□□□ -2.11
SPG7Q9UQ90 MTATP8P2-201ENST00000435212 202 ntBASIC1.87□□□□□ -2.11
SPG7Q9UQ90 AC091304.10-201ENST00000641554 121 ntBASIC1.87□□□□□ -2.11
SPG7Q9UQ90 Y_RNA.43-201ENST00000362670 111 ntBASIC1.86□□□□□ -2.11
SPG7Q9UQ90 RNU6-170P-201ENST00000362832 104 ntBASIC1.86□□□□□ -2.11
SPG7Q9UQ90 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.86□□□□□ -2.11
SPG7Q9UQ90 U8.15-201ENST00000390947 134 ntBASIC1.86□□□□□ -2.11
SPG7Q9UQ90 AC023790.1-201ENST00000482174 347 ntBASIC1.86□□□□□ -2.11
SPG7Q9UQ90 RNU6-1006P-201ENST00000516998 103 ntBASIC1.86□□□□□ -2.11
SPG7Q9UQ90 RNU6-158P-201ENST00000517104 100 ntBASIC1.86□□□□□ -2.11
SPG7Q9UQ90 MIR6504-201ENST00000613520 61 ntBASIC1.86□□□□□ -2.11
SPG7Q9UQ90 AP001362.1-201ENST00000625165 124 ntBASIC1.86□□□□□ -2.11
SPG7Q9UQ90 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SPG7Q9UQ90 SNORD38.1-201ENST00000363863 68 ntBASIC1.85□□□□□ -2.11
SPG7Q9UQ90 RNU6-910P-201ENST00000390844 107 ntBASIC1.85□□□□□ -2.11
SPG7Q9UQ90 RNU1-123P-201ENST00000458950 160 ntBASIC1.85□□□□□ -2.11
SPG7Q9UQ90 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.85□□□□□ -2.11
SPG7Q9UQ90 MIR548Z-201ENST00000584743 97 ntBASIC1.85□□□□□ -2.11
SPG7Q9UQ90 AL078603.1-201ENST00000603824 313 ntBASIC1.85□□□□□ -2.11
SPG7Q9UQ90 MIR6734-201ENST00000621166 68 ntBASIC1.85□□□□□ -2.11
SPG7Q9UQ90 RNU6-1255P-201ENST00000363434 112 ntBASIC1.84□□□□□ -2.11
SPG7Q9UQ90 MRPL35P3-201ENST00000421557 364 ntBASIC1.84□□□□□ -2.11
SPG7Q9UQ90 AC004941.2-201ENST00000427009 228 ntBASIC1.84□□□□□ -2.11
SPG7Q9UQ90 snoU13.21-201ENST00000459368 105 ntBASIC1.84□□□□□ -2.11
SPG7Q9UQ90 MIR5582-201ENST00000579697 68 ntBASIC1.84□□□□□ -2.11
SPG7Q9UQ90 AC012676.2-201ENST00000619258 186 ntBASIC1.84□□□□□ -2.11
SPG7Q9UQ90 MIR2052-201ENST00000636055 55 ntBASIC1.84□□□□□ -2.11
SPG7Q9UQ90 Y_RNA.95-201ENST00000363079 95 ntBASIC1.83□□□□□ -2.12
SPG7Q9UQ90 SNORD113.3-201ENST00000364630 78 ntBASIC1.83□□□□□ -2.12
SPG7Q9UQ90 AL591704.2-201ENST00000421658 181 ntBASIC1.83□□□□□ -2.12
SPG7Q9UQ90 MIR18B-201ENST00000454574 71 ntBASIC1.83□□□□□ -2.12
SPG7Q9UQ90 AC036111.3-201ENST00000526389 112 ntBASIC1.83□□□□□ -2.12
SPG7Q9UQ90 AC023827.1-201ENST00000569247 97 ntBASIC1.83□□□□□ -2.12
SPG7Q9UQ90 U6.109-201ENST00000636749 87 ntBASIC1.83□□□□□ -2.12
SPG7Q9UQ90 RNU6-53P-201ENST00000365367 106 ntBASIC1.82□□□□□ -2.12
SPG7Q9UQ90 MIR320A-201ENST00000385302 82 ntBASIC1.82□□□□□ -2.12
SPG7Q9UQ90 AC138749.4-201ENST00000563970 127 ntBASIC1.82□□□□□ -2.12
SPG7Q9UQ90 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SPG7Q9UQ90 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SPG7Q9UQ90 Y_RNA.36-201ENST00000362602 112 ntBASIC1.81□□□□□ -2.12
SPG7Q9UQ90 RNA5SP133-201ENST00000363368 119 ntBASIC1.81□□□□□ -2.12
SPG7Q9UQ90 RNY1P2-201ENST00000364820 117 ntBASIC1.81□□□□□ -2.12
SPG7Q9UQ90 MIR488-201ENST00000365739 83 ntBASIC1.81□□□□□ -2.12
SPG7Q9UQ90 SNORD38.2-201ENST00000384470 69 ntBASIC1.81□□□□□ -2.12
SPG7Q9UQ90 SNORA80D-201ENST00000384488 135 ntBASIC1.81□□□□□ -2.12
SPG7Q9UQ90 RNU6-644P-201ENST00000391155 98 ntBASIC1.81□□□□□ -2.12
SPG7Q9UQ90 SNORD83.1-201ENST00000411362 77 ntBASIC1.81□□□□□ -2.12
SPG7Q9UQ90 AC096949.1-201ENST00000412047 152 ntBASIC1.81□□□□□ -2.12
SPG7Q9UQ90 RNU7-21P-201ENST00000459430 62 ntBASIC1.81□□□□□ -2.12
SPG7Q9UQ90 RNU7-61P-201ENST00000515897 61 ntBASIC1.81□□□□□ -2.12
SPG7Q9UQ90 MIR4777-201ENST00000583710 86 ntBASIC1.81□□□□□ -2.12
SPG7Q9UQ90 MIR6078-201ENST00000611069 100 ntBASIC1.81□□□□□ -2.12
SPG7Q9UQ90 RNU6-1131P-201ENST00000364955 107 ntBASIC1.8□□□□□ -2.12
SPG7Q9UQ90 Y_RNA.467-201ENST00000384297 102 ntBASIC1.8□□□□□ -2.12
SPG7Q9UQ90 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.8□□□□□ -2.12
SPG7Q9UQ90 SNORD93-201ENST00000408813 74 ntBASIC1.8□□□□□ -2.12
SPG7Q9UQ90 SPINT5P-201ENST00000448174 155 ntBASIC1.8□□□□□ -2.12
SPG7Q9UQ90 AC109327.2-201ENST00000448339 378 ntBASIC1.8□□□□□ -2.12
SPG7Q9UQ90 RNA5SP102-201ENST00000516865 106 ntBASIC1.8□□□□□ -2.12
SPG7Q9UQ90 MTND5P40-201ENST00000559945 246 ntBASIC1.8□□□□□ -2.12
SPG7Q9UQ90 AC023934.1-201ENST00000574529 2389 ntBASIC1.79□□□□□ -2.12
SPG7Q9UQ90 MIR548G-201ENST00000408442 89 ntBASIC1.79□□□□□ -2.12
SPG7Q9UQ90 SNORD79.1-201ENST00000516069 84 ntBASIC1.79□□□□□ -2.12
SPG7Q9UQ90 RNA5SP220-201ENST00000516298 104 ntBASIC1.79□□□□□ -2.12
SPG7Q9UQ90 AC090897.1-201ENST00000580909 226 ntBASIC1.79□□□□□ -2.12
SPG7Q9UQ90 Y_RNA.342-201ENST00000365352 113 ntBASIC1.78□□□□□ -2.12
SPG7Q9UQ90 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
SPG7Q9UQ90 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.78□□□□□ -2.12
SPG7Q9UQ90 AC015818.7-201ENST00000428754 109 ntBASIC1.78□□□□□ -2.12
SPG7Q9UQ90 AC087499.7-201ENST00000441958 109 ntBASIC1.78□□□□□ -2.12
SPG7Q9UQ90 SNORA70.22-201ENST00000517160 124 ntBASIC1.78□□□□□ -2.12
SPG7Q9UQ90 RNU6-90P-201ENST00000606352 106 ntBASIC1.78□□□□□ -2.12
SPG7Q9UQ90 AC106800.4-201ENST00000614905 153 ntBASIC1.78□□□□□ -2.12
SPG7Q9UQ90 MALAT1.1-201ENST00000618249 95 ntBASIC1.78□□□□□ -2.12
SPG7Q9UQ90 Y_RNA.119-201ENST00000363301 96 ntBASIC1.77□□□□□ -2.13
SPG7Q9UQ90 RNU1-36P-201ENST00000365130 165 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 547.8 ms