Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RNU1-52P-201ENST00000384190 164 ntBASIC2.97□□□□□ -1.93
PDZRN3Q9UPQ7 SNORD63B-201ENST00000411005 70 ntBASIC2.97□□□□□ -1.93
PDZRN3Q9UPQ7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.97□□□□□ -1.93
PDZRN3Q9UPQ7 AC026436.1-201ENST00000510537 270 ntBASIC2.97□□□□□ -1.93
PDZRN3Q9UPQ7 RNA5SP445-201ENST00000515889 115 ntBASIC2.97□□□□□ -1.93
PDZRN3Q9UPQ7 RNU6-1194P-201ENST00000516208 104 ntBASIC2.97□□□□□ -1.93
PDZRN3Q9UPQ7 RNU6-982P-201ENST00000516216 102 ntBASIC2.97□□□□□ -1.93
PDZRN3Q9UPQ7 RNU6-548P-201ENST00000517083 115 ntBASIC2.97□□□□□ -1.93
PDZRN3Q9UPQ7 MIR5007-201ENST00000583098 95 ntBASIC2.97□□□□□ -1.93
PDZRN3Q9UPQ7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PDZRN3Q9UPQ7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
PDZRN3Q9UPQ7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
PDZRN3Q9UPQ7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.97□□□□□ -1.93
PDZRN3Q9UPQ7 Y_RNA.239-201ENST00000364444 113 ntBASIC2.96□□□□□ -1.94
PDZRN3Q9UPQ7 RNU6-950P-201ENST00000384651 107 ntBASIC2.96□□□□□ -1.94
PDZRN3Q9UPQ7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.96□□□□□ -1.94
PDZRN3Q9UPQ7 AL606490.4-201ENST00000423117 127 ntBASIC2.96□□□□□ -1.94
PDZRN3Q9UPQ7 RPL23AP42-201ENST00000471152 471 ntBASIC2.96□□□□□ -1.94
PDZRN3Q9UPQ7 RNU6-542P-201ENST00000516405 103 ntBASIC2.96□□□□□ -1.94
PDZRN3Q9UPQ7 RNU7-43P-201ENST00000516554 64 ntBASIC2.96□□□□□ -1.94
PDZRN3Q9UPQ7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.96□□□□□ -1.94
PDZRN3Q9UPQ7 MIR6873-201ENST00000622788 63 ntBASIC2.96□□□□□ -1.94
PDZRN3Q9UPQ7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.96□□□□□ -1.94
PDZRN3Q9UPQ7 RPS27P16-201ENST00000425758 201 ntBASIC2.95□□□□□ -1.94
PDZRN3Q9UPQ7 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.95□□□□□ -1.94
PDZRN3Q9UPQ7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
PDZRN3Q9UPQ7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PDZRN3Q9UPQ7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
PDZRN3Q9UPQ7 Y_RNA.375-201ENST00000365625 101 ntBASIC2.94□□□□□ -1.94
PDZRN3Q9UPQ7 AL023284.1-201ENST00000403956 276 ntBASIC2.94□□□□□ -1.94
PDZRN3Q9UPQ7 AC244023.1-201ENST00000426884 112 ntBASIC2.94□□□□□ -1.94
PDZRN3Q9UPQ7 snoU13.2-201ENST00000459201 104 ntBASIC2.94□□□□□ -1.94
PDZRN3Q9UPQ7 RNU11-2P-201ENST00000516898 142 ntBASIC2.94□□□□□ -1.94
PDZRN3Q9UPQ7 AC242498.1-201ENST00000604134 111 ntBASIC2.94□□□□□ -1.94
PDZRN3Q9UPQ7 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.94□□□□□ -1.94
PDZRN3Q9UPQ7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
PDZRN3Q9UPQ7 Y_RNA.676-201ENST00000516393 96 ntBASIC2.93□□□□□ -1.94
PDZRN3Q9UPQ7 SNORA31.15-201ENST00000516771 132 ntBASIC2.93□□□□□ -1.94
PDZRN3Q9UPQ7 MIR4696-201ENST00000581431 70 ntBASIC2.93□□□□□ -1.94
PDZRN3Q9UPQ7 AL353997.5-201ENST00000618886 171 ntBASIC2.93□□□□□ -1.94
PDZRN3Q9UPQ7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.93□□□□□ -1.94
PDZRN3Q9UPQ7 AL596028.1-201ENST00000326971 197 ntBASIC2.92□□□□□ -1.94
PDZRN3Q9UPQ7 MIR563-201ENST00000385080 79 ntBASIC2.92□□□□□ -1.94
PDZRN3Q9UPQ7 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.92□□□□□ -1.94
PDZRN3Q9UPQ7 AC005786.1-201ENST00000588553 154 ntBASIC2.92□□□□□ -1.94
PDZRN3Q9UPQ7 AC021506.2-201ENST00000612354 169 ntBASIC2.92□□□□□ -1.94
PDZRN3Q9UPQ7 TRDV1-202ENST00000621643 102 ntBASIC2.92□□□□□ -1.94
PDZRN3Q9UPQ7 AL513423.1-201ENST00000621695 132 ntBASIC2.92□□□□□ -1.94
PDZRN3Q9UPQ7 RNU6-664P-201ENST00000362381 107 ntBASIC2.91□□□□□ -1.94
PDZRN3Q9UPQ7 RNA5SP458-201ENST00000516188 119 ntBASIC2.91□□□□□ -1.94
PDZRN3Q9UPQ7 AC245884.12-201ENST00000615364 59 ntBASIC2.91□□□□□ -1.94
PDZRN3Q9UPQ7 MIR219B-201ENST00000637023 88 ntBASIC2.91□□□□□ -1.94
PDZRN3Q9UPQ7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
PDZRN3Q9UPQ7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.94
PDZRN3Q9UPQ7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PDZRN3Q9UPQ7 RNA5SP82-201ENST00000516707 92 ntBASIC2.9□□□□□ -1.95
PDZRN3Q9UPQ7 MIR5094-201ENST00000578766 85 ntBASIC2.9□□□□□ -1.95
PDZRN3Q9UPQ7 MIR4251-201ENST00000635819 61 ntBASIC2.9□□□□□ -1.95
PDZRN3Q9UPQ7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PDZRN3Q9UPQ7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.9□□□□□ -1.95
PDZRN3Q9UPQ7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.89□□□□□ -1.95
PDZRN3Q9UPQ7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PDZRN3Q9UPQ7 MIR588-201ENST00000384900 83 ntBASIC2.89□□□□□ -1.95
PDZRN3Q9UPQ7 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
PDZRN3Q9UPQ7 U8.13-201ENST00000390842 128 ntBASIC2.89□□□□□ -1.95
PDZRN3Q9UPQ7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PDZRN3Q9UPQ7 SCARNA21.1-201ENST00000515996 128 ntBASIC2.89□□□□□ -1.95
PDZRN3Q9UPQ7 MIR3920-201ENST00000581751 86 ntBASIC2.89□□□□□ -1.95
PDZRN3Q9UPQ7 SNORA4-201ENST00000584302 138 ntBASIC2.89□□□□□ -1.95
PDZRN3Q9UPQ7 ZNF355P-201ENST00000427301 3216 ntBASIC2.89□□□□□ -1.95
PDZRN3Q9UPQ7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.88□□□□□ -1.95
PDZRN3Q9UPQ7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PDZRN3Q9UPQ7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
PDZRN3Q9UPQ7 RNU6-654P-201ENST00000364373 107 ntBASIC2.88□□□□□ -1.95
PDZRN3Q9UPQ7 SNORD101-201ENST00000384027 73 ntBASIC2.88□□□□□ -1.95
PDZRN3Q9UPQ7 MIR520C-201ENST00000385005 87 ntBASIC2.88□□□□□ -1.95
PDZRN3Q9UPQ7 HMGN2P23-201ENST00000456759 269 ntBASIC2.88□□□□□ -1.95
PDZRN3Q9UPQ7 RNU7-195P-201ENST00000458793 62 ntBASIC2.88□□□□□ -1.95
PDZRN3Q9UPQ7 MIR3938-201ENST00000582157 103 ntBASIC2.88□□□□□ -1.95
PDZRN3Q9UPQ7 MIR3935-201ENST00000583472 104 ntBASIC2.88□□□□□ -1.95
PDZRN3Q9UPQ7 U6.100-201ENST00000636230 99 ntBASIC2.88□□□□□ -1.95
PDZRN3Q9UPQ7 MIR30D-201ENST00000362283 70 ntBASIC2.87□□□□□ -1.95
PDZRN3Q9UPQ7 RNA5SP99-201ENST00000364020 114 ntBASIC2.87□□□□□ -1.95
PDZRN3Q9UPQ7 RNU6-668P-201ENST00000364180 107 ntBASIC2.87□□□□□ -1.95
PDZRN3Q9UPQ7 RNU6-1335P-201ENST00000365426 107 ntBASIC2.87□□□□□ -1.95
PDZRN3Q9UPQ7 RNU6-1052P-201ENST00000411398 104 ntBASIC2.87□□□□□ -1.95
PDZRN3Q9UPQ7 AC099513.1-201ENST00000490423 301 ntBASIC2.87□□□□□ -1.95
PDZRN3Q9UPQ7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.87□□□□□ -1.95
PDZRN3Q9UPQ7 RNU6-752P-201ENST00000516376 102 ntBASIC2.87□□□□□ -1.95
PDZRN3Q9UPQ7 RNU6-719P-201ENST00000516671 104 ntBASIC2.87□□□□□ -1.95
PDZRN3Q9UPQ7 RNU6-531P-201ENST00000516694 104 ntBASIC2.87□□□□□ -1.95
PDZRN3Q9UPQ7 MTRNR2L2-201ENST00000604882 87 ntBASIC2.87□□□□□ -1.95
PDZRN3Q9UPQ7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PDZRN3Q9UPQ7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.86□□□□□ -1.95
PDZRN3Q9UPQ7 SNORA16B-201ENST00000364674 135 ntBASIC2.86□□□□□ -1.95
PDZRN3Q9UPQ7 TRAJ51-201ENST00000504127 63 ntBASIC2.86□□□□□ -1.95
PDZRN3Q9UPQ7 MIR6766-201ENST00000622641 72 ntBASIC2.86□□□□□ -1.95
PDZRN3Q9UPQ7 MIR4773-1-201ENST00000637203 78 ntBASIC2.86□□□□□ -1.95
PDZRN3Q9UPQ7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
PDZRN3Q9UPQ7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms