Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 7SK.13-201ENST00000622040 250 ntBASIC1.53□□□□□ -2.16
CDC42EP3Q9UKI2 AC008163.1-202ENST00000636004 2889 ntBASIC1.53□□□□□ -2.16
CDC42EP3Q9UKI2 Y_RNA.467-201ENST00000384297 102 ntBASIC1.52□□□□□ -2.17
CDC42EP3Q9UKI2 RNY1P7-201ENST00000384743 110 ntBASIC1.52□□□□□ -2.17
CDC42EP3Q9UKI2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CDC42EP3Q9UKI2 MIR548G-201ENST00000408442 89 ntBASIC1.52□□□□□ -2.17
CDC42EP3Q9UKI2 Y_RNA.705-201ENST00000516862 110 ntBASIC1.52□□□□□ -2.17
CDC42EP3Q9UKI2 MIR5089-201ENST00000580047 84 ntBASIC1.52□□□□□ -2.17
CDC42EP3Q9UKI2 MIR8081-201ENST00000611533 95 ntBASIC1.52□□□□□ -2.17
CDC42EP3Q9UKI2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.52□□□□□ -2.17
CDC42EP3Q9UKI2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.51□□□□□ -2.17
CDC42EP3Q9UKI2 Y_RNA.173-201ENST00000363776 113 ntBASIC1.51□□□□□ -2.17
CDC42EP3Q9UKI2 Y_RNA.363-201ENST00000365529 113 ntBASIC1.51□□□□□ -2.17
CDC42EP3Q9UKI2 RNU6-972P-201ENST00000391208 107 ntBASIC1.51□□□□□ -2.17
CDC42EP3Q9UKI2 RNA5SP95-201ENST00000410319 137 ntBASIC1.51□□□□□ -2.17
CDC42EP3Q9UKI2 AC138749.4-201ENST00000563970 127 ntBASIC1.51□□□□□ -2.17
CDC42EP3Q9UKI2 RNU6-90P-201ENST00000606352 106 ntBASIC1.51□□□□□ -2.17
CDC42EP3Q9UKI2 U7.3-201ENST00000616123 62 ntBASIC1.51□□□□□ -2.17
CDC42EP3Q9UKI2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CDC42EP3Q9UKI2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.51□□□□□ -2.17
CDC42EP3Q9UKI2 SNORD38.2-201ENST00000384470 69 ntBASIC1.5□□□□□ -2.17
CDC42EP3Q9UKI2 RNU6-813P-201ENST00000384691 107 ntBASIC1.5□□□□□ -2.17
CDC42EP3Q9UKI2 MIR7-2-201ENST00000384970 110 ntBASIC1.5□□□□□ -2.17
CDC42EP3Q9UKI2 RNU6-887P-201ENST00000410660 100 ntBASIC1.5□□□□□ -2.17
CDC42EP3Q9UKI2 AC003989.2-201ENST00000440224 169 ntBASIC1.5□□□□□ -2.17
CDC42EP3Q9UKI2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.5□□□□□ -2.17
CDC42EP3Q9UKI2 Y_RNA.558-201ENST00000384685 113 ntBASIC1.49□□□□□ -2.17
CDC42EP3Q9UKI2 SNORA75.2-201ENST00000391138 150 ntBASIC1.49□□□□□ -2.17
CDC42EP3Q9UKI2 SNORA75.3-201ENST00000391231 150 ntBASIC1.49□□□□□ -2.17
CDC42EP3Q9UKI2 MIR1302-4-201ENST00000408701 150 ntBASIC1.49□□□□□ -2.17
CDC42EP3Q9UKI2 RPS29P11-201ENST00000496507 171 ntBASIC1.49□□□□□ -2.17
CDC42EP3Q9UKI2 SNORA31.2-201ENST00000516019 134 ntBASIC1.49□□□□□ -2.17
CDC42EP3Q9UKI2 AC036111.3-201ENST00000526389 112 ntBASIC1.49□□□□□ -2.17
CDC42EP3Q9UKI2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.49□□□□□ -2.17
CDC42EP3Q9UKI2 MIR4255-201ENST00000579351 72 ntBASIC1.49□□□□□ -2.17
CDC42EP3Q9UKI2 AC012676.2-201ENST00000619258 186 ntBASIC1.49□□□□□ -2.17
CDC42EP3Q9UKI2 RNU6-1244P-201ENST00000363614 108 ntBASIC1.48□□□□□ -2.17
CDC42EP3Q9UKI2 SNORD113.3-201ENST00000364630 78 ntBASIC1.48□□□□□ -2.17
CDC42EP3Q9UKI2 Y_RNA.567-201ENST00000384736 106 ntBASIC1.48□□□□□ -2.17
CDC42EP3Q9UKI2 MIR9-3-201ENST00000385084 90 ntBASIC1.48□□□□□ -2.17
CDC42EP3Q9UKI2 AL078603.1-201ENST00000603824 313 ntBASIC1.48□□□□□ -2.17
CDC42EP3Q9UKI2 RNU6-86P-201ENST00000606534 107 ntBASIC1.48□□□□□ -2.17
CDC42EP3Q9UKI2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
CDC42EP3Q9UKI2 SNORD73B-201ENST00000364394 72 ntBASIC1.47□□□□□ -2.17
CDC42EP3Q9UKI2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.47□□□□□ -2.17
CDC42EP3Q9UKI2 SNORD58A-201ENST00000383875 65 ntBASIC1.47□□□□□ -2.17
CDC42EP3Q9UKI2 RNU6-42P-201ENST00000384165 107 ntBASIC1.47□□□□□ -2.17
CDC42EP3Q9UKI2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42EP3Q9UKI2 SNORA72.7-201ENST00000516349 94 ntBASIC1.47□□□□□ -2.17
CDC42EP3Q9UKI2 AC026421.1-201ENST00000519101 163 ntBASIC1.47□□□□□ -2.17
CDC42EP3Q9UKI2 MIR4303-201ENST00000581299 66 ntBASIC1.47□□□□□ -2.17
CDC42EP3Q9UKI2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.47□□□□□ -2.17
CDC42EP3Q9UKI2 SNORA2B-201ENST00000384583 137 ntBASIC1.46□□□□□ -2.18
CDC42EP3Q9UKI2 RNU6-997P-201ENST00000384725 107 ntBASIC1.46□□□□□ -2.18
CDC42EP3Q9UKI2 Y_RNA.588-201ENST00000391254 102 ntBASIC1.46□□□□□ -2.18
CDC42EP3Q9UKI2 RNU7-21P-201ENST00000459430 62 ntBASIC1.46□□□□□ -2.18
CDC42EP3Q9UKI2 MIR4285-201ENST00000581001 85 ntBASIC1.46□□□□□ -2.18
CDC42EP3Q9UKI2 MIR6504-201ENST00000613520 61 ntBASIC1.46□□□□□ -2.18
CDC42EP3Q9UKI2 Y_RNA.119-201ENST00000363301 96 ntBASIC1.45□□□□□ -2.18
CDC42EP3Q9UKI2 RNA5SP133-201ENST00000363368 119 ntBASIC1.45□□□□□ -2.18
CDC42EP3Q9UKI2 SPINT5P-201ENST00000448174 155 ntBASIC1.45□□□□□ -2.18
CDC42EP3Q9UKI2 SNRPGP12-201ENST00000449481 213 ntBASIC1.45□□□□□ -2.18
CDC42EP3Q9UKI2 RNU7-95P-201ENST00000459222 64 ntBASIC1.45□□□□□ -2.18
CDC42EP3Q9UKI2 RNU6-162P-201ENST00000516228 103 ntBASIC1.45□□□□□ -2.18
CDC42EP3Q9UKI2 AC090897.1-201ENST00000580909 226 ntBASIC1.45□□□□□ -2.18
CDC42EP3Q9UKI2 MIR4491-201ENST00000581087 68 ntBASIC1.45□□□□□ -2.18
CDC42EP3Q9UKI2 AC106800.4-201ENST00000614905 153 ntBASIC1.45□□□□□ -2.18
CDC42EP3Q9UKI2 MIR6734-201ENST00000621166 68 ntBASIC1.45□□□□□ -2.18
CDC42EP3Q9UKI2 U6.109-201ENST00000636749 87 ntBASIC1.45□□□□□ -2.18
CDC42EP3Q9UKI2 SNORD116-10-201ENST00000363791 102 ntBASIC1.44□□□□□ -2.18
CDC42EP3Q9UKI2 SNORA16.1-201ENST00000364597 132 ntBASIC1.44□□□□□ -2.18
CDC42EP3Q9UKI2 RNU1-36P-201ENST00000365130 165 ntBASIC1.44□□□□□ -2.18
CDC42EP3Q9UKI2 SNORA80D-201ENST00000384488 135 ntBASIC1.44□□□□□ -2.18
CDC42EP3Q9UKI2 SNORD111-201ENST00000408139 94 ntBASIC1.44□□□□□ -2.18
CDC42EP3Q9UKI2 AL591704.2-201ENST00000421658 181 ntBASIC1.44□□□□□ -2.18
CDC42EP3Q9UKI2 snoU13.21-201ENST00000459368 105 ntBASIC1.44□□□□□ -2.18
CDC42EP3Q9UKI2 SNORD79.1-201ENST00000516069 84 ntBASIC1.44□□□□□ -2.18
CDC42EP3Q9UKI2 RNA5SP220-201ENST00000516298 104 ntBASIC1.44□□□□□ -2.18
CDC42EP3Q9UKI2 MTND5P40-201ENST00000559945 246 ntBASIC1.44□□□□□ -2.18
CDC42EP3Q9UKI2 SNORD53B-201ENST00000577887 78 ntBASIC1.44□□□□□ -2.18
CDC42EP3Q9UKI2 AC103810.7-201ENST00000607821 91 ntBASIC1.44□□□□□ -2.18
CDC42EP3Q9UKI2 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.44□□□□□ -2.18
CDC42EP3Q9UKI2 Y_RNA.190-201ENST00000363964 101 ntBASIC1.43□□□□□ -2.18
CDC42EP3Q9UKI2 Y_RNA.191-201ENST00000363972 113 ntBASIC1.43□□□□□ -2.18
CDC42EP3Q9UKI2 Y_RNA.330-201ENST00000365230 109 ntBASIC1.43□□□□□ -2.18
CDC42EP3Q9UKI2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.43□□□□□ -2.18
CDC42EP3Q9UKI2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.43□□□□□ -2.18
CDC42EP3Q9UKI2 RNU7-185P-201ENST00000459215 60 ntBASIC1.43□□□□□ -2.18
CDC42EP3Q9UKI2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42EP3Q9UKI2 RNU6-571P-201ENST00000384128 107 ntBASIC1.42□□□□□ -2.18
CDC42EP3Q9UKI2 RNU6-910P-201ENST00000390844 107 ntBASIC1.42□□□□□ -2.18
CDC42EP3Q9UKI2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.42□□□□□ -2.18
CDC42EP3Q9UKI2 MIR1276-201ENST00000408707 83 ntBASIC1.42□□□□□ -2.18
CDC42EP3Q9UKI2 SNORD93-201ENST00000408813 74 ntBASIC1.42□□□□□ -2.18
CDC42EP3Q9UKI2 RNU1-98P-201ENST00000458992 160 ntBASIC1.42□□□□□ -2.18
CDC42EP3Q9UKI2 RNU6-762P-201ENST00000517107 102 ntBASIC1.42□□□□□ -2.18
CDC42EP3Q9UKI2 MIR4500-201ENST00000579472 76 ntBASIC1.42□□□□□ -2.18
CDC42EP3Q9UKI2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CDC42EP3Q9UKI2 RNU6-392P-201ENST00000364926 101 ntBASIC1.41□□□□□ -2.18
CDC42EP3Q9UKI2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms