Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.68□□□□□ -2.68
COMMD3Q9UBI1 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.68□□□□□ -2.68
COMMD3Q9UBI1 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.68□□□□□ -2.68
COMMD3Q9UBI1 MIR29B1-201ENST00000385015 81 ntBASIC-1.68□□□□□ -2.68
COMMD3Q9UBI1 MIRLET7B-201ENST00000385140 83 ntBASIC-1.68□□□□□ -2.68
COMMD3Q9UBI1 MIR624-201ENST00000385217 97 ntBASIC-1.68□□□□□ -2.68
COMMD3Q9UBI1 U8.20-201ENST00000459445 131 ntBASIC-1.68□□□□□ -2.68
COMMD3Q9UBI1 Z99129.1-201ENST00000612510 255 ntBASIC-1.68□□□□□ -2.68
COMMD3Q9UBI1 RNU4-32P-201ENST00000363404 141 ntBASIC-1.69□□□□□ -2.68
COMMD3Q9UBI1 SNORD114-4-201ENST00000363962 75 ntBASIC-1.69□□□□□ -2.68
COMMD3Q9UBI1 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.69□□□□□ -2.68
COMMD3Q9UBI1 SNORA62.4-201ENST00000365504 151 ntBASIC-1.69□□□□□ -2.68
COMMD3Q9UBI1 MT-TT-201ENST00000387460 66 ntBASIC-1.69□□□□□ -2.68
COMMD3Q9UBI1 RNU4-69P-201ENST00000410677 143 ntBASIC-1.69□□□□□ -2.68
COMMD3Q9UBI1 MTND4LP30-201ENST00000454092 297 ntBASIC-1.69□□□□□ -2.68
COMMD3Q9UBI1 HSPE1P25-201ENST00000455484 251 ntBASIC-1.69□□□□□ -2.68
COMMD3Q9UBI1 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.69□□□□□ -2.68
COMMD3Q9UBI1 RNU2-4P-201ENST00000606190 192 ntBASIC-1.69□□□□□ -2.68
COMMD3Q9UBI1 MIR376B-201ENST00000614515 100 ntBASIC-1.69□□□□□ -2.68
COMMD3Q9UBI1 AC084781.2-201ENST00000615568 161 ntBASIC-1.69□□□□□ -2.68
COMMD3Q9UBI1 RNU6-845P-201ENST00000362578 103 ntBASIC-1.7□□□□□ -2.68
COMMD3Q9UBI1 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.7□□□□□ -2.68
COMMD3Q9UBI1 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.7□□□□□ -2.68
COMMD3Q9UBI1 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.7□□□□□ -2.68
COMMD3Q9UBI1 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.7□□□□□ -2.68
COMMD3Q9UBI1 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.7□□□□□ -2.68
COMMD3Q9UBI1 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.7□□□□□ -2.68
COMMD3Q9UBI1 AL606845.1-201ENST00000404881 255 ntBASIC-1.7□□□□□ -2.68
COMMD3Q9UBI1 RNU7-2P-201ENST00000516096 62 ntBASIC-1.7□□□□□ -2.68
COMMD3Q9UBI1 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.7□□□□□ -2.68
COMMD3Q9UBI1 MIR3611-201ENST00000584484 83 ntBASIC-1.7□□□□□ -2.68
COMMD3Q9UBI1 RPS29P30-201ENST00000600975 111 ntBASIC-1.7□□□□□ -2.68
COMMD3Q9UBI1 AC048344.4-201ENST00000619744 527 ntBASIC-1.7□□□□□ -2.68
COMMD3Q9UBI1 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.7□□□□□ -2.68
COMMD3Q9UBI1 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.71□□□□□ -2.68
COMMD3Q9UBI1 RNY4P14-201ENST00000363656 96 ntBASIC-1.71□□□□□ -2.68
COMMD3Q9UBI1 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.71□□□□□ -2.68
COMMD3Q9UBI1 RNU6-728P-201ENST00000365375 104 ntBASIC-1.71□□□□□ -2.68
COMMD3Q9UBI1 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.71□□□□□ -2.68
COMMD3Q9UBI1 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.71□□□□□ -2.68
COMMD3Q9UBI1 RNU2-35P-201ENST00000516446 142 ntBASIC-1.71□□□□□ -2.68
COMMD3Q9UBI1 AC022079.1-201ENST00000621546 602 ntBASIC-1.71□□□□□ -2.68
COMMD3Q9UBI1 MIR4320-201ENST00000636981 65 ntBASIC-1.71□□□□□ -2.68
COMMD3Q9UBI1 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.72□□□□□ -2.68
COMMD3Q9UBI1 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.72□□□□□ -2.68
COMMD3Q9UBI1 RNU6-102P-201ENST00000384485 104 ntBASIC-1.72□□□□□ -2.68
COMMD3Q9UBI1 MIR559-201ENST00000385188 96 ntBASIC-1.72□□□□□ -2.68
COMMD3Q9UBI1 MIR616-201ENST00000385293 97 ntBASIC-1.72□□□□□ -2.68
COMMD3Q9UBI1 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.72□□□□□ -2.68
COMMD3Q9UBI1 MIR3115-201ENST00000577915 68 ntBASIC-1.72□□□□□ -2.68
COMMD3Q9UBI1 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.72□□□□□ -2.68
COMMD3Q9UBI1 RNU4-90P-201ENST00000362773 141 ntBASIC-1.73□□□□□ -2.69
COMMD3Q9UBI1 SNORD113-8-201ENST00000363497 74 ntBASIC-1.73□□□□□ -2.69
COMMD3Q9UBI1 RNU6-978P-201ENST00000364371 103 ntBASIC-1.73□□□□□ -2.69
COMMD3Q9UBI1 MIR124-2-201ENST00000385081 109 ntBASIC-1.73□□□□□ -2.69
COMMD3Q9UBI1 SNORA79-201ENST00000408376 140 ntBASIC-1.73□□□□□ -2.69
COMMD3Q9UBI1 RNU4-43P-201ENST00000410628 137 ntBASIC-1.73□□□□□ -2.69
COMMD3Q9UBI1 AC026421.1-201ENST00000519101 163 ntBASIC-1.73□□□□□ -2.69
COMMD3Q9UBI1 AL138825.1-201ENST00000618587 192 ntBASIC-1.73□□□□□ -2.69
COMMD3Q9UBI1 SNORD27-201ENST00000363981 72 ntBASIC-1.74□□□□□ -2.69
COMMD3Q9UBI1 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.74□□□□□ -2.69
COMMD3Q9UBI1 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.74□□□□□ -2.69
COMMD3Q9UBI1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.74□□□□□ -2.69
COMMD3Q9UBI1 SNORD77B-201ENST00000391112 67 ntBASIC-1.74□□□□□ -2.69
COMMD3Q9UBI1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.74□□□□□ -2.69
COMMD3Q9UBI1 RNA5SP266-201ENST00000410273 108 ntBASIC-1.74□□□□□ -2.69
COMMD3Q9UBI1 RNU4-14P-201ENST00000410858 122 ntBASIC-1.74□□□□□ -2.69
COMMD3Q9UBI1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.74□□□□□ -2.69
COMMD3Q9UBI1 snoU18.1-201ENST00000629629 71 ntBASIC-1.74□□□□□ -2.69
COMMD3Q9UBI1 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.75□□□□□ -2.69
COMMD3Q9UBI1 RNU6-662P-201ENST00000384253 104 ntBASIC-1.75□□□□□ -2.69
COMMD3Q9UBI1 RNU6-337P-201ENST00000391243 106 ntBASIC-1.75□□□□□ -2.69
COMMD3Q9UBI1 RNU6-370P-201ENST00000411008 104 ntBASIC-1.75□□□□□ -2.69
COMMD3Q9UBI1 RNU6-130P-201ENST00000411112 103 ntBASIC-1.75□□□□□ -2.69
COMMD3Q9UBI1 AL161932.1-201ENST00000437408 146 ntBASIC-1.75□□□□□ -2.69
COMMD3Q9UBI1 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.75□□□□□ -2.69
COMMD3Q9UBI1 SNORD116-25-201ENST00000516517 92 ntBASIC-1.75□□□□□ -2.69
COMMD3Q9UBI1 SNORA40.14-201ENST00000516543 86 ntBASIC-1.75□□□□□ -2.69
COMMD3Q9UBI1 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.75□□□□□ -2.69
COMMD3Q9UBI1 SNORD36A-201ENST00000362874 73 ntBASIC-1.76□□□□□ -2.69
COMMD3Q9UBI1 RNU6-54P-201ENST00000365563 107 ntBASIC-1.76□□□□□ -2.69
COMMD3Q9UBI1 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.76□□□□□ -2.69
COMMD3Q9UBI1 RNU6-243P-201ENST00000391140 107 ntBASIC-1.76□□□□□ -2.69
COMMD3Q9UBI1 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.76□□□□□ -2.69
COMMD3Q9UBI1 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.76□□□□□ -2.69
COMMD3Q9UBI1 MIR5690-201ENST00000583739 73 ntBASIC-1.76□□□□□ -2.69
COMMD3Q9UBI1 AC009779.6-201ENST00000603972 165 ntBASIC-1.76□□□□□ -2.69
COMMD3Q9UBI1 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.77□□□□□ -2.69
COMMD3Q9UBI1 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.77□□□□□ -2.69
COMMD3Q9UBI1 MIR181A1-201ENST00000385026 110 ntBASIC-1.77□□□□□ -2.69
COMMD3Q9UBI1 RNU6-453P-201ENST00000516819 85 ntBASIC-1.77□□□□□ -2.69
COMMD3Q9UBI1 RNU6-762P-201ENST00000517107 102 ntBASIC-1.77□□□□□ -2.69
COMMD3Q9UBI1 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.78□□□□□ -2.69
COMMD3Q9UBI1 RNU6-690P-201ENST00000365242 106 ntBASIC-1.78□□□□□ -2.69
COMMD3Q9UBI1 SNORD101-201ENST00000384027 73 ntBASIC-1.78□□□□□ -2.69
COMMD3Q9UBI1 RNU6-576P-201ENST00000390854 102 ntBASIC-1.78□□□□□ -2.69
COMMD3Q9UBI1 RNU6-506P-201ENST00000516553 94 ntBASIC-1.78□□□□□ -2.69
COMMD3Q9UBI1 RNU6-699P-201ENST00000517081 110 ntBASIC-1.78□□□□□ -2.69
COMMD3Q9UBI1 SNORA25.1-201ENST00000362326 128 ntBASIC-1.79□□□□□ -2.7
COMMD3Q9UBI1 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.79□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 1597.9 ms