Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.17□□□□□ -2.44
CCDC88CQ9P219 RNU6-326P-201ENST00000365480 107 ntBASIC-0.17□□□□□ -2.44
CCDC88CQ9P219 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.17□□□□□ -2.44
CCDC88CQ9P219 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.17□□□□□ -2.44
CCDC88CQ9P219 MIR516A2-201ENST00000384888 90 ntBASIC-0.17□□□□□ -2.44
CCDC88CQ9P219 MIR516A1-201ENST00000385033 90 ntBASIC-0.17□□□□□ -2.44
CCDC88CQ9P219 RNU6-578P-201ENST00000390980 103 ntBASIC-0.17□□□□□ -2.44
CCDC88CQ9P219 RNU4-43P-201ENST00000410628 137 ntBASIC-0.17□□□□□ -2.44
CCDC88CQ9P219 RNA5SP144-201ENST00000410846 116 ntBASIC-0.17□□□□□ -2.44
CCDC88CQ9P219 RNU7-48P-201ENST00000458875 63 ntBASIC-0.17□□□□□ -2.44
CCDC88CQ9P219 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 MT-TI-201ENST00000387365 69 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 RNU6-381P-201ENST00000391259 108 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 RNU6-588P-201ENST00000410281 105 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 SNORD4A-201ENST00000459174 72 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 AP003072.1-201ENST00000531740 145 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 MIR4752-201ENST00000579672 72 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 MIR548H5-201ENST00000580314 60 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 MIR378D2-201ENST00000580636 98 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 AL359881.1-201ENST00000602916 267 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 AC011603.4-201ENST00000611325 277 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 MIR8066-201ENST00000617280 78 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 MIR367-201ENST00000362299 68 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 SNORD115-35-201ENST00000365122 82 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 SUMO1P3-201ENST00000439961 304 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 AC244505.6-201ENST00000452829 130 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 RNU7-123P-201ENST00000515911 60 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 MIR3121-201ENST00000579680 77 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 AL391099.1-201ENST00000624635 187 ntBASIC-0.18□□□□□ -2.44
CCDC88CQ9P219 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.19□□□□□ -2.44
CCDC88CQ9P219 RNU6-690P-201ENST00000365242 106 ntBASIC-0.19□□□□□ -2.44
CCDC88CQ9P219 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.19□□□□□ -2.44
CCDC88CQ9P219 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.19□□□□□ -2.44
CCDC88CQ9P219 MIR1302-6-201ENST00000408466 90 ntBASIC-0.19□□□□□ -2.44
CCDC88CQ9P219 RNU6-735P-201ENST00000410612 107 ntBASIC-0.19□□□□□ -2.44
CCDC88CQ9P219 AC084368.1-201ENST00000620935 65 ntBASIC-0.19□□□□□ -2.44
CCDC88CQ9P219 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 SNORD36A-201ENST00000362874 73 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 SNORD114-11-201ENST00000363738 75 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 SNORD24-201ENST00000383884 75 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 RNU6-738P-201ENST00000384531 106 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 AC006210.1-201ENST00000424882 111 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 SNORD116-25-201ENST00000516517 92 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 AC007012.1-201ENST00000567192 175 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 SNORD27-201ENST00000363981 72 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 MIR181B2-201ENST00000385004 89 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 RNA5SP300-201ENST00000391197 107 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 SNORD127-201ENST00000458892 86 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 RNU6-240P-201ENST00000516098 97 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 RNU6-988P-201ENST00000519081 107 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 AL442663.2-201ENST00000554385 511 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 AC044792.1-201ENST00000593294 196 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 U6.106-201ENST00000636360 105 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 AL162726.3-218ENST00000636401 95 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 MIR6844-201ENST00000637122 62 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 MIR6841-201ENST00000637129 72 ntBASIC-0.2□□□□□ -2.44
CCDC88CQ9P219 SNORA22.1-201ENST00000362701 134 ntBASIC-0.21□□□□□ -2.44
CCDC88CQ9P219 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.21□□□□□ -2.44
CCDC88CQ9P219 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.21□□□□□ -2.44
CCDC88CQ9P219 MIR606-201ENST00000384851 96 ntBASIC-0.21□□□□□ -2.44
CCDC88CQ9P219 MIR106A-201ENST00000384870 81 ntBASIC-0.21□□□□□ -2.44
CCDC88CQ9P219 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.21□□□□□ -2.44
CCDC88CQ9P219 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.21□□□□□ -2.44
CCDC88CQ9P219 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.21□□□□□ -2.44
CCDC88CQ9P219 AC069503.3-201ENST00000618674 145 ntBASIC-0.21□□□□□ -2.44
CCDC88CQ9P219 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.21□□□□□ -2.44
CCDC88CQ9P219 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.21□□□□□ -2.44
CCDC88CQ9P219 AC022028.1-201ENST00000412054 408 ntBASIC-0.21□□□□□ -2.44
CCDC88CQ9P219 MTATP6P23-201ENST00000440153 476 ntBASIC-0.21□□□□□ -2.44
CCDC88CQ9P219 AC008737.2-201ENST00000599446 118 ntBASIC-0.21□□□□□ -2.44
CCDC88CQ9P219 MIR376B-201ENST00000614515 100 ntBASIC-0.21□□□□□ -2.44
CCDC88CQ9P219 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.21□□□□□ -2.44
CCDC88CQ9P219 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.21□□□□□ -2.44
CCDC88CQ9P219 SNORD115-24-201ENST00000363528 82 ntBASIC-0.22□□□□□ -2.44
CCDC88CQ9P219 RNY4P28-201ENST00000365281 93 ntBASIC-0.22□□□□□ -2.44
CCDC88CQ9P219 RNU6-291P-201ENST00000384720 107 ntBASIC-0.22□□□□□ -2.44
CCDC88CQ9P219 AL121914.1-201ENST00000450188 156 ntBASIC-0.22□□□□□ -2.44
CCDC88CQ9P219 AC082651.2-201ENST00000496833 166 ntBASIC-0.22□□□□□ -2.44
CCDC88CQ9P219 RN7SKP19-201ENST00000516016 252 ntBASIC-0.22□□□□□ -2.44
CCDC88CQ9P219 RNU7-137P-201ENST00000516788 62 ntBASIC-0.22□□□□□ -2.44
CCDC88CQ9P219 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.22□□□□□ -2.45
CCDC88CQ9P219 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 RNU6-713P-201ENST00000384761 107 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 MT-TQ-201ENST00000387372 72 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 MIR548I2-201ENST00000408348 149 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 AC244250.2-201ENST00000418731 148 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms