Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 MIR320A-201ENST00000385302 82 ntBASIC1.4□□□□□ -2.19
KCMF1Q9P0J7 SNORD111-201ENST00000408139 94 ntBASIC1.4□□□□□ -2.19
KCMF1Q9P0J7 AC096949.1-201ENST00000412047 152 ntBASIC1.4□□□□□ -2.19
KCMF1Q9P0J7 AC023790.1-201ENST00000482174 347 ntBASIC1.4□□□□□ -2.19
KCMF1Q9P0J7 RNU6-1006P-201ENST00000516998 103 ntBASIC1.4□□□□□ -2.19
KCMF1Q9P0J7 AC138749.4-201ENST00000563970 127 ntBASIC1.4□□□□□ -2.19
KCMF1Q9P0J7 AC106800.4-201ENST00000614905 153 ntBASIC1.4□□□□□ -2.19
KCMF1Q9P0J7 Y_RNA.107-201ENST00000363190 121 ntBASIC1.39□□□□□ -2.19
KCMF1Q9P0J7 SNORD38.1-201ENST00000363863 68 ntBASIC1.39□□□□□ -2.19
KCMF1Q9P0J7 SNORD45B-201ENST00000364617 72 ntBASIC1.39□□□□□ -2.19
KCMF1Q9P0J7 RNY1P2-201ENST00000364820 117 ntBASIC1.39□□□□□ -2.19
KCMF1Q9P0J7 RNU6-905P-201ENST00000384434 107 ntBASIC1.39□□□□□ -2.19
KCMF1Q9P0J7 RNA5SP247-201ENST00000411181 105 ntBASIC1.39□□□□□ -2.19
KCMF1Q9P0J7 AP1B1P2-201ENST00000416196 106 ntBASIC1.39□□□□□ -2.19
KCMF1Q9P0J7 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
KCMF1Q9P0J7 RPS29P23-201ENST00000458635 123 ntBASIC1.39□□□□□ -2.19
KCMF1Q9P0J7 RNU7-185P-201ENST00000459215 60 ntBASIC1.39□□□□□ -2.19
KCMF1Q9P0J7 MIR4771-2-201ENST00000577758 74 ntBASIC1.39□□□□□ -2.19
KCMF1Q9P0J7 MIR4771-1-201ENST00000582617 74 ntBASIC1.39□□□□□ -2.19
KCMF1Q9P0J7 MIR548Z-201ENST00000584743 97 ntBASIC1.39□□□□□ -2.19
KCMF1Q9P0J7 AC012531.4-201ENST00000616509 177 ntBASIC1.39□□□□□ -2.19
KCMF1Q9P0J7 AC091304.10-201ENST00000641554 121 ntBASIC1.39□□□□□ -2.19
KCMF1Q9P0J7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KCMF1Q9P0J7 RNU6-170P-201ENST00000362832 104 ntBASIC1.38□□□□□ -2.19
KCMF1Q9P0J7 RNU6-403P-201ENST00000363163 104 ntBASIC1.38□□□□□ -2.19
KCMF1Q9P0J7 RNU6-640P-201ENST00000363693 105 ntBASIC1.38□□□□□ -2.19
KCMF1Q9P0J7 RNU1-36P-201ENST00000365130 165 ntBASIC1.38□□□□□ -2.19
KCMF1Q9P0J7 SNORD38.2-201ENST00000384470 69 ntBASIC1.38□□□□□ -2.19
KCMF1Q9P0J7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
KCMF1Q9P0J7 MIR1257-201ENST00000408490 117 ntBASIC1.38□□□□□ -2.19
KCMF1Q9P0J7 RNU6-994P-201ENST00000410507 111 ntBASIC1.38□□□□□ -2.19
KCMF1Q9P0J7 RNU1-92P-201ENST00000517017 135 ntBASIC1.38□□□□□ -2.19
KCMF1Q9P0J7 SNORA31.24-201ENST00000517232 57 ntBASIC1.38□□□□□ -2.19
KCMF1Q9P0J7 snoU13.31-201ENST00000607291 104 ntBASIC1.38□□□□□ -2.19
KCMF1Q9P0J7 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.38□□□□□ -2.19
KCMF1Q9P0J7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.38□□□□□ -2.19
KCMF1Q9P0J7 RNU6-1298P-201ENST00000362456 101 ntBASIC1.37□□□□□ -2.19
KCMF1Q9P0J7 Y_RNA.93-201ENST00000363066 109 ntBASIC1.37□□□□□ -2.19
KCMF1Q9P0J7 Y_RNA.119-201ENST00000363301 96 ntBASIC1.37□□□□□ -2.19
KCMF1Q9P0J7 SNORA72.6-201ENST00000384520 129 ntBASIC1.37□□□□□ -2.19
KCMF1Q9P0J7 SPINT5P-201ENST00000448174 155 ntBASIC1.37□□□□□ -2.19
KCMF1Q9P0J7 RNU7-95P-201ENST00000459222 64 ntBASIC1.37□□□□□ -2.19
KCMF1Q9P0J7 RNU7-40P-201ENST00000516397 64 ntBASIC1.37□□□□□ -2.19
KCMF1Q9P0J7 RNA5SP170-201ENST00000517150 101 ntBASIC1.37□□□□□ -2.19
KCMF1Q9P0J7 MTND5P40-201ENST00000559945 246 ntBASIC1.37□□□□□ -2.19
KCMF1Q9P0J7 MIR4500-201ENST00000579472 76 ntBASIC1.37□□□□□ -2.19
KCMF1Q9P0J7 AC090897.1-201ENST00000580909 226 ntBASIC1.37□□□□□ -2.19
KCMF1Q9P0J7 MIR4491-201ENST00000581087 68 ntBASIC1.37□□□□□ -2.19
KCMF1Q9P0J7 Y_RNA.95-201ENST00000363079 95 ntBASIC1.36□□□□□ -2.19
KCMF1Q9P0J7 SNORA25-201ENST00000384384 134 ntBASIC1.36□□□□□ -2.19
KCMF1Q9P0J7 RNY4P30-201ENST00000410216 95 ntBASIC1.36□□□□□ -2.19
KCMF1Q9P0J7 MTATP8P2-201ENST00000435212 202 ntBASIC1.36□□□□□ -2.19
KCMF1Q9P0J7 AC109327.2-201ENST00000448339 378 ntBASIC1.36□□□□□ -2.19
KCMF1Q9P0J7 MIR4781-201ENST00000585250 76 ntBASIC1.36□□□□□ -2.19
KCMF1Q9P0J7 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
KCMF1Q9P0J7 SNORD12-201ENST00000391002 90 ntBASIC1.35□□□□□ -2.19
KCMF1Q9P0J7 Y_RNA.588-201ENST00000391254 102 ntBASIC1.35□□□□□ -2.19
KCMF1Q9P0J7 MIR548G-201ENST00000408442 89 ntBASIC1.35□□□□□ -2.19
KCMF1Q9P0J7 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
KCMF1Q9P0J7 RNU4-83P-201ENST00000410863 133 ntBASIC1.35□□□□□ -2.19
KCMF1Q9P0J7 AC004941.2-201ENST00000427009 228 ntBASIC1.35□□□□□ -2.19
KCMF1Q9P0J7 SNORA25.16-201ENST00000516741 121 ntBASIC1.35□□□□□ -2.19
KCMF1Q9P0J7 MIR4777-201ENST00000583710 86 ntBASIC1.35□□□□□ -2.19
KCMF1Q9P0J7 ZNF209P-201ENST00000593450 2304 ntBASIC1.34□□□□□ -2.19
KCMF1Q9P0J7 Y_RNA.467-201ENST00000384297 102 ntBASIC1.34□□□□□ -2.19
KCMF1Q9P0J7 RNU6-644P-201ENST00000391155 98 ntBASIC1.34□□□□□ -2.19
KCMF1Q9P0J7 RPS26P5-201ENST00000418544 335 ntBASIC1.34□□□□□ -2.19
KCMF1Q9P0J7 AC002429.1-201ENST00000437672 148 ntBASIC1.34□□□□□ -2.19
KCMF1Q9P0J7 RNU7-61P-201ENST00000515897 61 ntBASIC1.34□□□□□ -2.19
KCMF1Q9P0J7 Y_RNA.694-201ENST00000516677 117 ntBASIC1.34□□□□□ -2.19
KCMF1Q9P0J7 RNU6-158P-201ENST00000517104 100 ntBASIC1.34□□□□□ -2.19
KCMF1Q9P0J7 AC020891.4-201ENST00000605745 93 ntBASIC1.34□□□□□ -2.19
KCMF1Q9P0J7 RNU6-90P-201ENST00000606352 106 ntBASIC1.34□□□□□ -2.19
KCMF1Q9P0J7 MIR2052-201ENST00000636055 55 ntBASIC1.34□□□□□ -2.19
KCMF1Q9P0J7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
KCMF1Q9P0J7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
KCMF1Q9P0J7 RNU6-53P-201ENST00000365367 106 ntBASIC1.33□□□□□ -2.2
KCMF1Q9P0J7 Y_RNA.466-201ENST00000384294 113 ntBASIC1.33□□□□□ -2.2
KCMF1Q9P0J7 RNU6-531P-201ENST00000516694 104 ntBASIC1.33□□□□□ -2.2
KCMF1Q9P0J7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KCMF1Q9P0J7 RNU6-1163P-201ENST00000364516 107 ntBASIC1.32□□□□□ -2.2
KCMF1Q9P0J7 MIR125B2-201ENST00000385128 89 ntBASIC1.32□□□□□ -2.2
KCMF1Q9P0J7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
KCMF1Q9P0J7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.32□□□□□ -2.2
KCMF1Q9P0J7 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
KCMF1Q9P0J7 MIR4676-201ENST00000583078 72 ntBASIC1.32□□□□□ -2.2
KCMF1Q9P0J7 RNU6-86P-201ENST00000606534 107 ntBASIC1.32□□□□□ -2.2
KCMF1Q9P0J7 HSBP1P2-201ENST00000299671 229 ntBASIC1.31□□□□□ -2.2
KCMF1Q9P0J7 SNORA7.1-201ENST00000363750 139 ntBASIC1.31□□□□□ -2.2
KCMF1Q9P0J7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KCMF1Q9P0J7 SNORD26-201ENST00000384147 75 ntBASIC1.31□□□□□ -2.2
KCMF1Q9P0J7 Y_RNA.567-201ENST00000384736 106 ntBASIC1.31□□□□□ -2.2
KCMF1Q9P0J7 MIR100-201ENST00000385259 80 ntBASIC1.31□□□□□ -2.2
KCMF1Q9P0J7 RNU6-321P-201ENST00000410912 106 ntBASIC1.31□□□□□ -2.2
KCMF1Q9P0J7 BX276092.1-201ENST00000427368 251 ntBASIC1.31□□□□□ -2.2
KCMF1Q9P0J7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.31□□□□□ -2.2
KCMF1Q9P0J7 AC019288.1-201ENST00000557918 224 ntBASIC1.31□□□□□ -2.2
KCMF1Q9P0J7 MIR4421-201ENST00000578133 69 ntBASIC1.31□□□□□ -2.2
KCMF1Q9P0J7 MIR4439-201ENST00000583746 80 ntBASIC1.31□□□□□ -2.2
KCMF1Q9P0J7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 305 ms