Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 RPS26P5-201ENST00000418544 335 ntBASIC1.6□□□□□ -2.15
UBP1Q9NZI7 MTND5P40-201ENST00000559945 246 ntBASIC1.6□□□□□ -2.15
UBP1Q9NZI7 AC012531.4-201ENST00000616509 177 ntBASIC1.6□□□□□ -2.15
UBP1Q9NZI7 RNU6-60P-201ENST00000364792 103 ntBASIC1.59□□□□□ -2.15
UBP1Q9NZI7 Y_RNA.338-201ENST00000365320 114 ntBASIC1.59□□□□□ -2.15
UBP1Q9NZI7 Y_RNA.588-201ENST00000391254 102 ntBASIC1.59□□□□□ -2.15
UBP1Q9NZI7 RNU6-795P-201ENST00000516323 103 ntBASIC1.59□□□□□ -2.15
UBP1Q9NZI7 MIR4771-2-201ENST00000577758 74 ntBASIC1.59□□□□□ -2.15
UBP1Q9NZI7 MIR4771-1-201ENST00000582617 74 ntBASIC1.59□□□□□ -2.15
UBP1Q9NZI7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.59□□□□□ -2.15
UBP1Q9NZI7 RNA5SP327-201ENST00000362494 101 ntBASIC1.58□□□□□ -2.16
UBP1Q9NZI7 RNU4-58P-201ENST00000363192 141 ntBASIC1.58□□□□□ -2.16
UBP1Q9NZI7 SNORD26-201ENST00000384147 75 ntBASIC1.58□□□□□ -2.16
UBP1Q9NZI7 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
UBP1Q9NZI7 RNU4-83P-201ENST00000410863 133 ntBASIC1.58□□□□□ -2.16
UBP1Q9NZI7 AL603825.1-201ENST00000438481 80 ntBASIC1.58□□□□□ -2.16
UBP1Q9NZI7 SPINT5P-201ENST00000448174 155 ntBASIC1.58□□□□□ -2.16
UBP1Q9NZI7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.58□□□□□ -2.16
UBP1Q9NZI7 RNU6-1194P-201ENST00000516208 104 ntBASIC1.58□□□□□ -2.16
UBP1Q9NZI7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.58□□□□□ -2.16
UBP1Q9NZI7 MIR4777-201ENST00000583710 86 ntBASIC1.58□□□□□ -2.16
UBP1Q9NZI7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
UBP1Q9NZI7 MIR125B2-201ENST00000385128 89 ntBASIC1.57□□□□□ -2.16
UBP1Q9NZI7 AC002429.1-201ENST00000437672 148 ntBASIC1.57□□□□□ -2.16
UBP1Q9NZI7 AC067940.1-201ENST00000458411 300 ntBASIC1.57□□□□□ -2.16
UBP1Q9NZI7 Y_RNA.705-201ENST00000516862 110 ntBASIC1.57□□□□□ -2.16
UBP1Q9NZI7 MIR4255-201ENST00000579351 72 ntBASIC1.57□□□□□ -2.16
UBP1Q9NZI7 MIR4500-201ENST00000579472 76 ntBASIC1.57□□□□□ -2.16
UBP1Q9NZI7 AC090897.1-201ENST00000580909 226 ntBASIC1.57□□□□□ -2.16
UBP1Q9NZI7 BX248123.2-201ENST00000606318 124 ntBASIC1.57□□□□□ -2.16
UBP1Q9NZI7 AC091304.10-201ENST00000641554 121 ntBASIC1.57□□□□□ -2.16
UBP1Q9NZI7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
UBP1Q9NZI7 Y_RNA.43-201ENST00000362670 111 ntBASIC1.56□□□□□ -2.16
UBP1Q9NZI7 Y_RNA.164-201ENST00000363709 102 ntBASIC1.56□□□□□ -2.16
UBP1Q9NZI7 Y_RNA.173-201ENST00000363776 113 ntBASIC1.56□□□□□ -2.16
UBP1Q9NZI7 RNU6-1163P-201ENST00000364516 107 ntBASIC1.56□□□□□ -2.16
UBP1Q9NZI7 Y_RNA.567-201ENST00000384736 106 ntBASIC1.56□□□□□ -2.16
UBP1Q9NZI7 RNU6-972P-201ENST00000391208 107 ntBASIC1.56□□□□□ -2.16
UBP1Q9NZI7 AC109327.2-201ENST00000448339 378 ntBASIC1.56□□□□□ -2.16
UBP1Q9NZI7 AC023790.1-201ENST00000482174 347 ntBASIC1.56□□□□□ -2.16
UBP1Q9NZI7 RNU7-40P-201ENST00000516397 64 ntBASIC1.56□□□□□ -2.16
UBP1Q9NZI7 AC027335.2-201ENST00000624030 375 ntBASIC1.56□□□□□ -2.16
UBP1Q9NZI7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.55□□□□□ -2.16
UBP1Q9NZI7 RNU6-403P-201ENST00000363163 104 ntBASIC1.55□□□□□ -2.16
UBP1Q9NZI7 RNU6-571P-201ENST00000384128 107 ntBASIC1.55□□□□□ -2.16
UBP1Q9NZI7 SNORA72.6-201ENST00000384520 129 ntBASIC1.55□□□□□ -2.16
UBP1Q9NZI7 RNU6-813P-201ENST00000384691 107 ntBASIC1.55□□□□□ -2.16
UBP1Q9NZI7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.55□□□□□ -2.16
UBP1Q9NZI7 MIR1304-201ENST00000408243 91 ntBASIC1.55□□□□□ -2.16
UBP1Q9NZI7 RNU6-765P-201ENST00000516916 99 ntBASIC1.55□□□□□ -2.16
UBP1Q9NZI7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
UBP1Q9NZI7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.54□□□□□ -2.16
UBP1Q9NZI7 RNY4P30-201ENST00000410216 95 ntBASIC1.54□□□□□ -2.16
UBP1Q9NZI7 AC108667.1-201ENST00000428618 249 ntBASIC1.54□□□□□ -2.16
UBP1Q9NZI7 SNRPGP12-201ENST00000449481 213 ntBASIC1.54□□□□□ -2.16
UBP1Q9NZI7 RPS29P23-201ENST00000458635 123 ntBASIC1.54□□□□□ -2.16
UBP1Q9NZI7 MIR4676-201ENST00000583078 72 ntBASIC1.54□□□□□ -2.16
UBP1Q9NZI7 MIR4781-201ENST00000585250 76 ntBASIC1.54□□□□□ -2.16
UBP1Q9NZI7 MIR6082-201ENST00000613604 109 ntBASIC1.54□□□□□ -2.16
UBP1Q9NZI7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
UBP1Q9NZI7 MIR1-1-201ENST00000362147 71 ntBASIC1.53□□□□□ -2.16
UBP1Q9NZI7 MIR19B1-201ENST00000384829 87 ntBASIC1.53□□□□□ -2.16
UBP1Q9NZI7 RNU6-644P-201ENST00000391155 98 ntBASIC1.53□□□□□ -2.16
UBP1Q9NZI7 SNORA17.3-201ENST00000391159 129 ntBASIC1.53□□□□□ -2.16
UBP1Q9NZI7 RNU7-61P-201ENST00000515897 61 ntBASIC1.53□□□□□ -2.16
UBP1Q9NZI7 SNORA25.16-201ENST00000516741 121 ntBASIC1.53□□□□□ -2.16
UBP1Q9NZI7 SNORD53B-201ENST00000577887 78 ntBASIC1.53□□□□□ -2.16
UBP1Q9NZI7 AL645939.4-201ENST00000604495 135 ntBASIC1.53□□□□□ -2.16
UBP1Q9NZI7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
UBP1Q9NZI7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
UBP1Q9NZI7 RNU6-1125P-201ENST00000363601 107 ntBASIC1.52□□□□□ -2.17
UBP1Q9NZI7 RNU6-1244P-201ENST00000363614 108 ntBASIC1.52□□□□□ -2.17
UBP1Q9NZI7 RNU1-42P-201ENST00000364033 160 ntBASIC1.52□□□□□ -2.17
UBP1Q9NZI7 Y_RNA.220-201ENST00000364244 109 ntBASIC1.52□□□□□ -2.17
UBP1Q9NZI7 Y_RNA.369-201ENST00000365568 117 ntBASIC1.52□□□□□ -2.17
UBP1Q9NZI7 Y_RNA.467-201ENST00000384297 102 ntBASIC1.52□□□□□ -2.17
UBP1Q9NZI7 RNU6-480P-201ENST00000384332 107 ntBASIC1.52□□□□□ -2.17
UBP1Q9NZI7 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
UBP1Q9NZI7 MIR938-201ENST00000401216 83 ntBASIC1.52□□□□□ -2.17
UBP1Q9NZI7 RNU6-887P-201ENST00000410660 100 ntBASIC1.52□□□□□ -2.17
UBP1Q9NZI7 RNU6-531P-201ENST00000516694 104 ntBASIC1.52□□□□□ -2.17
UBP1Q9NZI7 MIR548Z-201ENST00000584743 97 ntBASIC1.52□□□□□ -2.17
UBP1Q9NZI7 AC020891.4-201ENST00000605745 93 ntBASIC1.52□□□□□ -2.17
UBP1Q9NZI7 MALAT1.1-201ENST00000618249 95 ntBASIC1.52□□□□□ -2.17
UBP1Q9NZI7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
UBP1Q9NZI7 Y_RNA.342-201ENST00000365352 113 ntBASIC1.51□□□□□ -2.17
UBP1Q9NZI7 RNU6-364P-201ENST00000384387 107 ntBASIC1.51□□□□□ -2.17
UBP1Q9NZI7 MIR100-201ENST00000385259 80 ntBASIC1.51□□□□□ -2.17
UBP1Q9NZI7 RNU7-156P-201ENST00000517214 74 ntBASIC1.51□□□□□ -2.17
UBP1Q9NZI7 MIR4303-201ENST00000581299 66 ntBASIC1.51□□□□□ -2.17
UBP1Q9NZI7 SNORD92-201ENST00000585078 85 ntBASIC1.51□□□□□ -2.17
UBP1Q9NZI7 RNU6-86P-201ENST00000606534 107 ntBASIC1.51□□□□□ -2.17
UBP1Q9NZI7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
UBP1Q9NZI7 Y_RNA.13-201ENST00000362403 112 ntBASIC1.5□□□□□ -2.17
UBP1Q9NZI7 MIR517C-201ENST00000385103 95 ntBASIC1.5□□□□□ -2.17
UBP1Q9NZI7 SNORA67.6-201ENST00000391093 99 ntBASIC1.5□□□□□ -2.17
UBP1Q9NZI7 MIR1827-201ENST00000408549 66 ntBASIC1.5□□□□□ -2.17
UBP1Q9NZI7 AL354695.1-201ENST00000427935 228 ntBASIC1.5□□□□□ -2.17
UBP1Q9NZI7 FABP5P4-201ENST00000437203 171 ntBASIC1.5□□□□□ -2.17
UBP1Q9NZI7 Y_RNA.676-201ENST00000516393 96 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms