Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RNU6-573P-201ENST00000383938 106 ntBASIC1.82□□□□□ -2.12
PDLIM7Q9NR12 U8.15-201ENST00000390947 134 ntBASIC1.82□□□□□ -2.12
PDLIM7Q9NR12 MIR548G-201ENST00000408442 89 ntBASIC1.82□□□□□ -2.12
PDLIM7Q9NR12 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.82□□□□□ -2.12
PDLIM7Q9NR12 RPL39P39-201ENST00000455840 151 ntBASIC1.82□□□□□ -2.12
PDLIM7Q9NR12 AC103810.7-201ENST00000607821 91 ntBASIC1.82□□□□□ -2.12
PDLIM7Q9NR12 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
PDLIM7Q9NR12 SNORA7.1-201ENST00000363750 139 ntBASIC1.81□□□□□ -2.12
PDLIM7Q9NR12 RNU6-592P-201ENST00000411333 103 ntBASIC1.81□□□□□ -2.12
PDLIM7Q9NR12 SPINT5P-201ENST00000448174 155 ntBASIC1.81□□□□□ -2.12
PDLIM7Q9NR12 RNU1-123P-201ENST00000458950 160 ntBASIC1.81□□□□□ -2.12
PDLIM7Q9NR12 AC019176.1-201ENST00000518519 225 ntBASIC1.81□□□□□ -2.12
PDLIM7Q9NR12 MIR4285-201ENST00000581001 85 ntBASIC1.81□□□□□ -2.12
PDLIM7Q9NR12 MIR4452-201ENST00000583004 71 ntBASIC1.81□□□□□ -2.12
PDLIM7Q9NR12 RNU6-90P-201ENST00000606352 106 ntBASIC1.81□□□□□ -2.12
PDLIM7Q9NR12 MIR6740-201ENST00000618268 113 ntBASIC1.81□□□□□ -2.12
PDLIM7Q9NR12 MIR302D-201ENST00000362275 68 ntBASIC1.8□□□□□ -2.12
PDLIM7Q9NR12 SNORD1A-201ENST00000364968 72 ntBASIC1.8□□□□□ -2.12
PDLIM7Q9NR12 SNORD58A-201ENST00000383875 65 ntBASIC1.8□□□□□ -2.12
PDLIM7Q9NR12 RNU6-949P-201ENST00000384040 107 ntBASIC1.8□□□□□ -2.12
PDLIM7Q9NR12 RNU6-205P-201ENST00000390858 107 ntBASIC1.8□□□□□ -2.12
PDLIM7Q9NR12 AL133373.1-201ENST00000497098 94 ntBASIC1.8□□□□□ -2.12
PDLIM7Q9NR12 RNA5SP102-201ENST00000516865 106 ntBASIC1.8□□□□□ -2.12
PDLIM7Q9NR12 AC133485.1-201ENST00000567176 124 ntBASIC1.8□□□□□ -2.12
PDLIM7Q9NR12 RMST_2.1-201ENST00000617263 136 ntBASIC1.8□□□□□ -2.12
PDLIM7Q9NR12 AP001362.1-201ENST00000625165 124 ntBASIC1.8□□□□□ -2.12
PDLIM7Q9NR12 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PDLIM7Q9NR12 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
PDLIM7Q9NR12 SNORD116-10-201ENST00000363791 102 ntBASIC1.79□□□□□ -2.12
PDLIM7Q9NR12 SNORD38.2-201ENST00000384470 69 ntBASIC1.79□□□□□ -2.12
PDLIM7Q9NR12 Y_RNA.567-201ENST00000384736 106 ntBASIC1.79□□□□□ -2.12
PDLIM7Q9NR12 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.79□□□□□ -2.12
PDLIM7Q9NR12 MIR2115-201ENST00000516657 100 ntBASIC1.79□□□□□ -2.12
PDLIM7Q9NR12 AP003716.2-201ENST00000528260 108 ntBASIC1.79□□□□□ -2.12
PDLIM7Q9NR12 MTND5P40-201ENST00000559945 246 ntBASIC1.79□□□□□ -2.12
PDLIM7Q9NR12 AC024614.2-201ENST00000577584 372 ntBASIC1.79□□□□□ -2.12
PDLIM7Q9NR12 MIR3937-201ENST00000580135 106 ntBASIC1.79□□□□□ -2.12
PDLIM7Q9NR12 MIR4264-201ENST00000583520 66 ntBASIC1.79□□□□□ -2.12
PDLIM7Q9NR12 AP000753.3-201ENST00000604083 169 ntBASIC1.79□□□□□ -2.12
PDLIM7Q9NR12 IGLL4P-201ENST00000614590 133 ntBASIC1.79□□□□□ -2.12
PDLIM7Q9NR12 MIR6516-201ENST00000630554 81 ntBASIC1.79□□□□□ -2.12
PDLIM7Q9NR12 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
PDLIM7Q9NR12 RNU6-1244P-201ENST00000363614 108 ntBASIC1.78□□□□□ -2.12
PDLIM7Q9NR12 RNY1P1-201ENST00000364372 112 ntBASIC1.78□□□□□ -2.12
PDLIM7Q9NR12 RNU6-1152P-201ENST00000384576 107 ntBASIC1.78□□□□□ -2.12
PDLIM7Q9NR12 MIR563-201ENST00000385080 79 ntBASIC1.78□□□□□ -2.12
PDLIM7Q9NR12 MIR1185-1-201ENST00000408598 86 ntBASIC1.78□□□□□ -2.12
PDLIM7Q9NR12 RNU6-402P-201ENST00000410678 103 ntBASIC1.78□□□□□ -2.12
PDLIM7Q9NR12 RNU1-98P-201ENST00000458992 160 ntBASIC1.78□□□□□ -2.12
PDLIM7Q9NR12 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.78□□□□□ -2.12
PDLIM7Q9NR12 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.78□□□□□ -2.12
PDLIM7Q9NR12 MIR4421-201ENST00000578133 69 ntBASIC1.78□□□□□ -2.12
PDLIM7Q9NR12 AC012676.2-201ENST00000619258 186 ntBASIC1.78□□□□□ -2.12
PDLIM7Q9NR12 MIR103A2-201ENST00000362154 78 ntBASIC1.77□□□□□ -2.13
PDLIM7Q9NR12 SNORD116-22-201ENST00000384430 92 ntBASIC1.77□□□□□ -2.13
PDLIM7Q9NR12 RNU6-1165P-201ENST00000410119 107 ntBASIC1.77□□□□□ -2.13
PDLIM7Q9NR12 RNU7-62P-201ENST00000458856 62 ntBASIC1.77□□□□□ -2.13
PDLIM7Q9NR12 AC012493.3-201ENST00000604494 112 ntBASIC1.77□□□□□ -2.13
PDLIM7Q9NR12 MIR1245B-201ENST00000636115 69 ntBASIC1.77□□□□□ -2.13
PDLIM7Q9NR12 MIR30D-201ENST00000362283 70 ntBASIC1.76□□□□□ -2.13
PDLIM7Q9NR12 RNA5SP264-201ENST00000363115 107 ntBASIC1.76□□□□□ -2.13
PDLIM7Q9NR12 Y_RNA.173-201ENST00000363776 113 ntBASIC1.76□□□□□ -2.13
PDLIM7Q9NR12 SNORA67.6-201ENST00000391093 99 ntBASIC1.76□□□□□ -2.13
PDLIM7Q9NR12 RNA5SP480-201ENST00000516840 109 ntBASIC1.76□□□□□ -2.13
PDLIM7Q9NR12 AL157834.3-201ENST00000615543 103 ntBASIC1.76□□□□□ -2.13
PDLIM7Q9NR12 Y_RNA.73-201ENST00000362910 113 ntBASIC1.75□□□□□ -2.13
PDLIM7Q9NR12 RNU6-654P-201ENST00000364373 107 ntBASIC1.75□□□□□ -2.13
PDLIM7Q9NR12 RNY1P2-201ENST00000364820 117 ntBASIC1.75□□□□□ -2.13
PDLIM7Q9NR12 RNU6-42P-201ENST00000384165 107 ntBASIC1.75□□□□□ -2.13
PDLIM7Q9NR12 MT-TN-201ENST00000387400 73 ntBASIC1.75□□□□□ -2.13
PDLIM7Q9NR12 MIR1323-201ENST00000408090 73 ntBASIC1.75□□□□□ -2.13
PDLIM7Q9NR12 RNA5SP95-201ENST00000410319 137 ntBASIC1.75□□□□□ -2.13
PDLIM7Q9NR12 RPL30P7-201ENST00000479312 323 ntBASIC1.75□□□□□ -2.13
PDLIM7Q9NR12 AC022137.1-201ENST00000483735 151 ntBASIC1.75□□□□□ -2.13
PDLIM7Q9NR12 RNU6-267P-201ENST00000516714 103 ntBASIC1.75□□□□□ -2.13
PDLIM7Q9NR12 RNU6-902P-201ENST00000517212 91 ntBASIC1.75□□□□□ -2.13
PDLIM7Q9NR12 uc_338.6-201ENST00000613544 171 ntBASIC1.75□□□□□ -2.13
PDLIM7Q9NR12 ZNF209P-201ENST00000593450 2304 ntBASIC1.74□□□□□ -2.13
PDLIM7Q9NR12 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PDLIM7Q9NR12 Y_RNA.168-201ENST00000363740 102 ntBASIC1.74□□□□□ -2.13
PDLIM7Q9NR12 RNU6-675P-201ENST00000384236 104 ntBASIC1.74□□□□□ -2.13
PDLIM7Q9NR12 RNU11-2P-201ENST00000516898 142 ntBASIC1.74□□□□□ -2.13
PDLIM7Q9NR12 RNU1-92P-201ENST00000517017 135 ntBASIC1.74□□□□□ -2.13
PDLIM7Q9NR12 AC138749.4-201ENST00000563970 127 ntBASIC1.74□□□□□ -2.13
PDLIM7Q9NR12 MIR3664-201ENST00000579074 99 ntBASIC1.74□□□□□ -2.13
PDLIM7Q9NR12 AC090897.1-201ENST00000580909 226 ntBASIC1.74□□□□□ -2.13
PDLIM7Q9NR12 U6.109-201ENST00000636749 87 ntBASIC1.74□□□□□ -2.13
PDLIM7Q9NR12 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PDLIM7Q9NR12 RNU6-219P-201ENST00000364728 107 ntBASIC1.73□□□□□ -2.13
PDLIM7Q9NR12 RNU6-53P-201ENST00000365367 106 ntBASIC1.73□□□□□ -2.13
PDLIM7Q9NR12 SNORD114-22-201ENST00000365423 72 ntBASIC1.73□□□□□ -2.13
PDLIM7Q9NR12 RNY1P4-201ENST00000384595 115 ntBASIC1.73□□□□□ -2.13
PDLIM7Q9NR12 MIR4668-201ENST00000582284 70 ntBASIC1.73□□□□□ -2.13
PDLIM7Q9NR12 AL078603.1-201ENST00000603824 313 ntBASIC1.73□□□□□ -2.13
PDLIM7Q9NR12 AC020891.4-201ENST00000605745 93 ntBASIC1.73□□□□□ -2.13
PDLIM7Q9NR12 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.73□□□□□ -2.13
PDLIM7Q9NR12 HSBP1P2-201ENST00000299671 229 ntBASIC1.72□□□□□ -2.13
PDLIM7Q9NR12 SNORA2B-201ENST00000384583 137 ntBASIC1.72□□□□□ -2.13
PDLIM7Q9NR12 MIR181B2-201ENST00000385004 89 ntBASIC1.72□□□□□ -2.13
PDLIM7Q9NR12 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms