Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 RNU6-531P-201ENST00000516694 104 ntBASIC0.63□□□□□ -2.31
ARFGAP3Q9NP61 AC092634.7-201ENST00000621022 103 ntBASIC0.63□□□□□ -2.31
ARFGAP3Q9NP61 Y_RNA.32-201ENST00000362589 110 ntBASIC0.62□□□□□ -2.31
ARFGAP3Q9NP61 RNU4-58P-201ENST00000363192 141 ntBASIC0.62□□□□□ -2.31
ARFGAP3Q9NP61 Y_RNA.294-201ENST00000364916 102 ntBASIC0.62□□□□□ -2.31
ARFGAP3Q9NP61 Y_RNA.536-201ENST00000384621 113 ntBASIC0.62□□□□□ -2.31
ARFGAP3Q9NP61 RNA5SP94-201ENST00000516917 108 ntBASIC0.62□□□□□ -2.31
ARFGAP3Q9NP61 AC138749.4-201ENST00000563970 127 ntBASIC0.62□□□□□ -2.31
ARFGAP3Q9NP61 TUG1_4.1-201ENST00000619464 181 ntBASIC0.62□□□□□ -2.31
ARFGAP3Q9NP61 RNU6-291P-201ENST00000384720 107 ntBASIC0.61□□□□□ -2.31
ARFGAP3Q9NP61 RNU6-535P-201ENST00000384722 107 ntBASIC0.61□□□□□ -2.31
ARFGAP3Q9NP61 MIR644A-201ENST00000385262 94 ntBASIC0.61□□□□□ -2.31
ARFGAP3Q9NP61 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.61□□□□□ -2.31
ARFGAP3Q9NP61 RNA5SP272-201ENST00000516095 111 ntBASIC0.61□□□□□ -2.31
ARFGAP3Q9NP61 RNU6-1194P-201ENST00000516208 104 ntBASIC0.61□□□□□ -2.31
ARFGAP3Q9NP61 RNU6-426P-201ENST00000516464 97 ntBASIC0.61□□□□□ -2.31
ARFGAP3Q9NP61 SNORA31.14-201ENST00000516728 116 ntBASIC0.61□□□□□ -2.31
ARFGAP3Q9NP61 RNU6-255P-201ENST00000516957 105 ntBASIC0.61□□□□□ -2.31
ARFGAP3Q9NP61 IGKV1-22-201ENST00000524313 326 ntBASIC0.61□□□□□ -2.31
ARFGAP3Q9NP61 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
ARFGAP3Q9NP61 MIR6515-201ENST00000619843 57 ntBASIC0.61□□□□□ -2.31
ARFGAP3Q9NP61 uc_338.16-201ENST00000621804 95 ntBASIC0.61□□□□□ -2.31
ARFGAP3Q9NP61 Y_RNA.174-201ENST00000363781 105 ntBASIC0.6□□□□□ -2.31
ARFGAP3Q9NP61 RNA5SP136-201ENST00000410906 107 ntBASIC0.6□□□□□ -2.31
ARFGAP3Q9NP61 RN7SKP12-201ENST00000516275 143 ntBASIC0.6□□□□□ -2.31
ARFGAP3Q9NP61 RNA5SP499-201ENST00000363982 119 ntBASIC0.59□□□□□ -2.31
ARFGAP3Q9NP61 RNA5SP517-201ENST00000364724 117 ntBASIC0.59□□□□□ -2.31
ARFGAP3Q9NP61 Y_RNA.280-201ENST00000364765 112 ntBASIC0.59□□□□□ -2.31
ARFGAP3Q9NP61 Y_RNA.567-201ENST00000384736 106 ntBASIC0.59□□□□□ -2.31
ARFGAP3Q9NP61 MIR759-201ENST00000390224 91 ntBASIC0.59□□□□□ -2.31
ARFGAP3Q9NP61 AC098934.3-201ENST00000430450 190 ntBASIC0.59□□□□□ -2.31
ARFGAP3Q9NP61 AL158147.1-201ENST00000443970 75 ntBASIC0.59□□□□□ -2.31
ARFGAP3Q9NP61 AL157398.1-201ENST00000452981 186 ntBASIC0.59□□□□□ -2.31
ARFGAP3Q9NP61 RN7SKP19-201ENST00000516016 252 ntBASIC0.59□□□□□ -2.31
ARFGAP3Q9NP61 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.59□□□□□ -2.31
ARFGAP3Q9NP61 Y_RNA.119-201ENST00000363301 96 ntBASIC0.58□□□□□ -2.32
ARFGAP3Q9NP61 MIR206-201ENST00000384872 86 ntBASIC0.58□□□□□ -2.32
ARFGAP3Q9NP61 SNORA40-201ENST00000388090 126 ntBASIC0.58□□□□□ -2.32
ARFGAP3Q9NP61 RNU6-1321P-201ENST00000390905 107 ntBASIC0.58□□□□□ -2.32
ARFGAP3Q9NP61 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
ARFGAP3Q9NP61 Y_RNA.213-201ENST00000364178 111 ntBASIC0.57□□□□□ -2.32
ARFGAP3Q9NP61 RNY1P2-201ENST00000364820 117 ntBASIC0.57□□□□□ -2.32
ARFGAP3Q9NP61 Y_RNA.506-201ENST00000384494 102 ntBASIC0.57□□□□□ -2.32
ARFGAP3Q9NP61 Y_RNA.568-201ENST00000384742 113 ntBASIC0.57□□□□□ -2.32
ARFGAP3Q9NP61 MIR3163-201ENST00000581592 73 ntBASIC0.57□□□□□ -2.32
ARFGAP3Q9NP61 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.57□□□□□ -2.32
ARFGAP3Q9NP61 MIR101-2-201ENST00000362195 79 ntBASIC0.56□□□□□ -2.32
ARFGAP3Q9NP61 SNORD18A-201ENST00000363753 72 ntBASIC0.56□□□□□ -2.32
ARFGAP3Q9NP61 Y_RNA.198-201ENST00000364013 98 ntBASIC0.56□□□□□ -2.32
ARFGAP3Q9NP61 Y_RNA.448-201ENST00000384185 108 ntBASIC0.56□□□□□ -2.32
ARFGAP3Q9NP61 MIR598-201ENST00000384868 97 ntBASIC0.56□□□□□ -2.32
ARFGAP3Q9NP61 MTND4LP9-201ENST00000427694 174 ntBASIC0.56□□□□□ -2.32
ARFGAP3Q9NP61 RNU6-135P-201ENST00000516769 101 ntBASIC0.56□□□□□ -2.32
ARFGAP3Q9NP61 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
ARFGAP3Q9NP61 RNU6-616P-201ENST00000384353 107 ntBASIC0.55□□□□□ -2.32
ARFGAP3Q9NP61 MIR613-201ENST00000385248 95 ntBASIC0.55□□□□□ -2.32
ARFGAP3Q9NP61 MIR1263-201ENST00000408324 86 ntBASIC0.55□□□□□ -2.32
ARFGAP3Q9NP61 SNORA40.8-201ENST00000411034 126 ntBASIC0.55□□□□□ -2.32
ARFGAP3Q9NP61 SNORD71-201ENST00000411292 86 ntBASIC0.55□□□□□ -2.32
ARFGAP3Q9NP61 SNORA68.3-201ENST00000515906 83 ntBASIC0.55□□□□□ -2.32
ARFGAP3Q9NP61 RNU6-229P-201ENST00000516614 102 ntBASIC0.55□□□□□ -2.32
ARFGAP3Q9NP61 RNU7-6P-201ENST00000516845 62 ntBASIC0.55□□□□□ -2.32
ARFGAP3Q9NP61 RNU7-48P-201ENST00000458875 63 ntBASIC0.54□□□□□ -2.32
ARFGAP3Q9NP61 Y_RNA.98-201ENST00000363109 102 ntBASIC0.53□□□□□ -2.32
ARFGAP3Q9NP61 MIR539-201ENST00000365690 78 ntBASIC0.53□□□□□ -2.32
ARFGAP3Q9NP61 SNORA8.2-201ENST00000384372 139 ntBASIC0.53□□□□□ -2.32
ARFGAP3Q9NP61 MIRLET7F2-201ENST00000385277 83 ntBASIC0.53□□□□□ -2.32
ARFGAP3Q9NP61 MT-TI-201ENST00000387365 69 ntBASIC0.53□□□□□ -2.32
ARFGAP3Q9NP61 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.53□□□□□ -2.32
ARFGAP3Q9NP61 RNU7-2P-201ENST00000516096 62 ntBASIC0.53□□□□□ -2.32
ARFGAP3Q9NP61 RNU6-346P-201ENST00000516288 111 ntBASIC0.53□□□□□ -2.32
ARFGAP3Q9NP61 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.53□□□□□ -2.32
ARFGAP3Q9NP61 SNORA25.18-201ENST00000607153 114 ntBASIC0.53□□□□□ -2.32
ARFGAP3Q9NP61 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
ARFGAP3Q9NP61 SNORA36.1-201ENST00000363424 132 ntBASIC0.52□□□□□ -2.33
ARFGAP3Q9NP61 RNU6-429P-201ENST00000384582 108 ntBASIC0.52□□□□□ -2.33
ARFGAP3Q9NP61 MIR518A1-201ENST00000385068 85 ntBASIC0.52□□□□□ -2.33
ARFGAP3Q9NP61 RNU6-1307P-201ENST00000391012 103 ntBASIC0.52□□□□□ -2.33
ARFGAP3Q9NP61 RNU6-257P-201ENST00000410238 98 ntBASIC0.52□□□□□ -2.33
ARFGAP3Q9NP61 RNA5SP347-201ENST00000362445 119 ntBASIC0.51□□□□□ -2.33
ARFGAP3Q9NP61 SNORD115-19-201ENST00000363098 82 ntBASIC0.51□□□□□ -2.33
ARFGAP3Q9NP61 SNORD115-18-201ENST00000363293 82 ntBASIC0.51□□□□□ -2.33
ARFGAP3Q9NP61 SNORA63.5-201ENST00000363548 123 ntBASIC0.51□□□□□ -2.33
ARFGAP3Q9NP61 RNA5SP245-201ENST00000364239 121 ntBASIC0.51□□□□□ -2.33
ARFGAP3Q9NP61 RNU6-1229P-201ENST00000364295 107 ntBASIC0.51□□□□□ -2.33
ARFGAP3Q9NP61 SNORD115-17-201ENST00000364612 82 ntBASIC0.51□□□□□ -2.33
ARFGAP3Q9NP61 SNORD115-35-201ENST00000365122 82 ntBASIC0.51□□□□□ -2.33
ARFGAP3Q9NP61 RNU6-1062P-201ENST00000383908 107 ntBASIC0.51□□□□□ -2.33
ARFGAP3Q9NP61 MT-TR-201ENST00000387439 65 ntBASIC0.51□□□□□ -2.33
ARFGAP3Q9NP61 Y_RNA.703-201ENST00000516846 111 ntBASIC0.51□□□□□ -2.33
ARFGAP3Q9NP61 AC087741.2-201ENST00000619415 172 ntBASIC0.51□□□□□ -2.33
ARFGAP3Q9NP61 PVT1_3.1-201ENST00000620853 95 ntBASIC0.51□□□□□ -2.33
ARFGAP3Q9NP61 MIR6513-201ENST00000621188 64 ntBASIC0.51□□□□□ -2.33
ARFGAP3Q9NP61 RNU6-235P-201ENST00000362644 107 ntBASIC0.5□□□□□ -2.33
ARFGAP3Q9NP61 Y_RNA.56-201ENST00000362798 112 ntBASIC0.5□□□□□ -2.33
ARFGAP3Q9NP61 RNU6-865P-201ENST00000364772 107 ntBASIC0.5□□□□□ -2.33
ARFGAP3Q9NP61 Y_RNA.528-201ENST00000384575 108 ntBASIC0.5□□□□□ -2.33
ARFGAP3Q9NP61 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.5□□□□□ -2.33
ARFGAP3Q9NP61 RNU6-781P-201ENST00000516377 101 ntBASIC0.5□□□□□ -2.33
ARFGAP3Q9NP61 MIR4500-201ENST00000579472 76 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 360.9 ms