Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 RNU4-58P-201ENST00000363192 141 ntBASIC0.49□□□□□ -2.33
POLR1BQ9H9Y6 RNU6-508P-201ENST00000363231 103 ntBASIC0.49□□□□□ -2.33
POLR1BQ9H9Y6 SNORA32-201ENST00000384072 121 ntBASIC0.49□□□□□ -2.33
POLR1BQ9H9Y6 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
POLR1BQ9H9Y6 RNU7-123P-201ENST00000515911 60 ntBASIC0.49□□□□□ -2.33
POLR1BQ9H9Y6 Y_RNA.692-201ENST00000516627 105 ntBASIC0.49□□□□□ -2.33
POLR1BQ9H9Y6 RNU7-137P-201ENST00000516788 62 ntBASIC0.49□□□□□ -2.33
POLR1BQ9H9Y6 RNA5SP94-201ENST00000516917 108 ntBASIC0.49□□□□□ -2.33
POLR1BQ9H9Y6 AL137067.1-201ENST00000615933 120 ntBASIC0.49□□□□□ -2.33
POLR1BQ9H9Y6 Y_RNA.178-201ENST00000363832 102 ntBASIC0.48□□□□□ -2.33
POLR1BQ9H9Y6 VTRNA1-3-201ENST00000365645 89 ntBASIC0.48□□□□□ -2.33
POLR1BQ9H9Y6 SNORD116-18-201ENST00000383961 92 ntBASIC0.48□□□□□ -2.33
POLR1BQ9H9Y6 RNU6-886P-201ENST00000384319 105 ntBASIC0.48□□□□□ -2.33
POLR1BQ9H9Y6 Y_RNA.536-201ENST00000384621 113 ntBASIC0.48□□□□□ -2.33
POLR1BQ9H9Y6 RNU6-679P-201ENST00000391003 106 ntBASIC0.48□□□□□ -2.33
POLR1BQ9H9Y6 AP001340.1-201ENST00000624405 217 ntBASIC0.48□□□□□ -2.33
POLR1BQ9H9Y6 SNORD18A-201ENST00000363753 72 ntBASIC0.47□□□□□ -2.33
POLR1BQ9H9Y6 Y_RNA.366-201ENST00000365540 102 ntBASIC0.47□□□□□ -2.33
POLR1BQ9H9Y6 SNORD77B-201ENST00000391112 67 ntBASIC0.47□□□□□ -2.33
POLR1BQ9H9Y6 SNORA40.8-201ENST00000411034 126 ntBASIC0.47□□□□□ -2.33
POLR1BQ9H9Y6 SNORD71-201ENST00000411292 86 ntBASIC0.47□□□□□ -2.33
POLR1BQ9H9Y6 Y_RNA.697-201ENST00000516776 113 ntBASIC0.47□□□□□ -2.33
POLR1BQ9H9Y6 MIR3144-201ENST00000579460 79 ntBASIC0.47□□□□□ -2.33
POLR1BQ9H9Y6 MIR3121-201ENST00000579680 77 ntBASIC0.47□□□□□ -2.33
POLR1BQ9H9Y6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.47□□□□□ -2.33
POLR1BQ9H9Y6 RNU6-1130P-201ENST00000365434 107 ntBASIC0.46□□□□□ -2.34
POLR1BQ9H9Y6 SNORA50A-201ENST00000384225 134 ntBASIC0.46□□□□□ -2.34
POLR1BQ9H9Y6 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
POLR1BQ9H9Y6 SNORD67.1-201ENST00000516618 108 ntBASIC0.46□□□□□ -2.34
POLR1BQ9H9Y6 SNORA25.16-201ENST00000516741 121 ntBASIC0.46□□□□□ -2.34
POLR1BQ9H9Y6 DEFB131E-201ENST00000532329 154 ntBASIC0.46□□□□□ -2.34
POLR1BQ9H9Y6 MIR548X2-201ENST00000579776 100 ntBASIC0.46□□□□□ -2.34
POLR1BQ9H9Y6 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.46□□□□□ -2.34
POLR1BQ9H9Y6 RNA5SP133-201ENST00000363368 119 ntBASIC0.45□□□□□ -2.34
POLR1BQ9H9Y6 RNU6-915P-201ENST00000364943 103 ntBASIC0.45□□□□□ -2.34
POLR1BQ9H9Y6 Y_RNA.400-201ENST00000383963 111 ntBASIC0.45□□□□□ -2.34
POLR1BQ9H9Y6 Y_RNA.555-201ENST00000384673 110 ntBASIC0.45□□□□□ -2.34
POLR1BQ9H9Y6 RNU6-291P-201ENST00000384720 107 ntBASIC0.45□□□□□ -2.34
POLR1BQ9H9Y6 PCNPP3-201ENST00000393579 471 ntBASIC0.45□□□□□ -2.34
POLR1BQ9H9Y6 AC090625.1-201ENST00000357130 210 ntBASIC0.44□□□□□ -2.34
POLR1BQ9H9Y6 RNA5SP517-201ENST00000364724 117 ntBASIC0.44□□□□□ -2.34
POLR1BQ9H9Y6 RNY1P2-201ENST00000364820 117 ntBASIC0.44□□□□□ -2.34
POLR1BQ9H9Y6 RNU6-535P-201ENST00000384722 107 ntBASIC0.44□□□□□ -2.34
POLR1BQ9H9Y6 MIR518A1-201ENST00000385068 85 ntBASIC0.44□□□□□ -2.34
POLR1BQ9H9Y6 MIRLET7F2-201ENST00000385277 83 ntBASIC0.44□□□□□ -2.34
POLR1BQ9H9Y6 RNU5E-3P-201ENST00000515913 68 ntBASIC0.44□□□□□ -2.34
POLR1BQ9H9Y6 SNORA25.12-201ENST00000516202 82 ntBASIC0.44□□□□□ -2.34
POLR1BQ9H9Y6 AP001328.1-201ENST00000528550 176 ntBASIC0.44□□□□□ -2.34
POLR1BQ9H9Y6 AC090425.1-201ENST00000610007 140 ntBASIC0.44□□□□□ -2.34
POLR1BQ9H9Y6 Y_RNA.32-201ENST00000362589 110 ntBASIC0.43□□□□□ -2.34
POLR1BQ9H9Y6 RNU6-804P-201ENST00000384286 107 ntBASIC0.43□□□□□ -2.34
POLR1BQ9H9Y6 Y_RNA.567-201ENST00000384736 106 ntBASIC0.43□□□□□ -2.34
POLR1BQ9H9Y6 RNU6-460P-201ENST00000391158 108 ntBASIC0.43□□□□□ -2.34
POLR1BQ9H9Y6 RNU6-863P-201ENST00000515989 104 ntBASIC0.43□□□□□ -2.34
POLR1BQ9H9Y6 RNY4P20-201ENST00000516678 93 ntBASIC0.43□□□□□ -2.34
POLR1BQ9H9Y6 SNORA31.14-201ENST00000516728 116 ntBASIC0.43□□□□□ -2.34
POLR1BQ9H9Y6 AC138749.4-201ENST00000563970 127 ntBASIC0.43□□□□□ -2.34
POLR1BQ9H9Y6 AL359881.1-201ENST00000602916 267 ntBASIC0.43□□□□□ -2.34
POLR1BQ9H9Y6 U6.109-201ENST00000636749 87 ntBASIC0.43□□□□□ -2.34
POLR1BQ9H9Y6 RNU6-1099P-201ENST00000363533 107 ntBASIC0.42□□□□□ -2.34
POLR1BQ9H9Y6 RNU6-647P-201ENST00000364243 107 ntBASIC0.42□□□□□ -2.34
POLR1BQ9H9Y6 Y_RNA.433-201ENST00000384089 102 ntBASIC0.42□□□□□ -2.34
POLR1BQ9H9Y6 MIR644A-201ENST00000385262 94 ntBASIC0.42□□□□□ -2.34
POLR1BQ9H9Y6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.42□□□□□ -2.34
POLR1BQ9H9Y6 SNORA62.5-201ENST00000516634 120 ntBASIC0.42□□□□□ -2.34
POLR1BQ9H9Y6 RNU6-531P-201ENST00000516694 104 ntBASIC0.42□□□□□ -2.34
POLR1BQ9H9Y6 MTND5P34-201ENST00000568888 325 ntBASIC0.42□□□□□ -2.34
POLR1BQ9H9Y6 AC108081.1-201ENST00000604358 221 ntBASIC0.42□□□□□ -2.34
POLR1BQ9H9Y6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.42□□□□□ -2.34
POLR1BQ9H9Y6 MIR101-2-201ENST00000362195 79 ntBASIC0.41□□□□□ -2.34
POLR1BQ9H9Y6 MIRLET7D-201ENST00000362263 87 ntBASIC0.41□□□□□ -2.34
POLR1BQ9H9Y6 RNA5SP62-201ENST00000363457 110 ntBASIC0.41□□□□□ -2.34
POLR1BQ9H9Y6 Y_RNA.150-201ENST00000363562 102 ntBASIC0.41□□□□□ -2.34
POLR1BQ9H9Y6 SNORD118-201ENST00000363593 134 ntBASIC0.41□□□□□ -2.34
POLR1BQ9H9Y6 Y_RNA.215-201ENST00000364204 112 ntBASIC0.41□□□□□ -2.34
POLR1BQ9H9Y6 Y_RNA.398-201ENST00000383952 99 ntBASIC0.41□□□□□ -2.34
POLR1BQ9H9Y6 Y_RNA.464-201ENST00000384282 110 ntBASIC0.41□□□□□ -2.34
POLR1BQ9H9Y6 SNORA8.2-201ENST00000384372 139 ntBASIC0.41□□□□□ -2.34
POLR1BQ9H9Y6 RNU6-429P-201ENST00000384582 108 ntBASIC0.41□□□□□ -2.34
POLR1BQ9H9Y6 AC108059.2-201ENST00000434626 151 ntBASIC0.41□□□□□ -2.34
POLR1BQ9H9Y6 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
POLR1BQ9H9Y6 MIR4639-201ENST00000584938 69 ntBASIC0.41□□□□□ -2.34
POLR1BQ9H9Y6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.4□□□□□ -2.34
POLR1BQ9H9Y6 Y_RNA.56-201ENST00000362798 112 ntBASIC0.4□□□□□ -2.35
POLR1BQ9H9Y6 Y_RNA.119-201ENST00000363301 96 ntBASIC0.4□□□□□ -2.35
POLR1BQ9H9Y6 Y_RNA.180-201ENST00000363867 113 ntBASIC0.4□□□□□ -2.35
POLR1BQ9H9Y6 RNU6-1229P-201ENST00000364295 107 ntBASIC0.4□□□□□ -2.35
POLR1BQ9H9Y6 MIR1270-201ENST00000459320 83 ntBASIC0.4□□□□□ -2.35
POLR1BQ9H9Y6 Y_RNA.8-201ENST00000362353 102 ntBASIC0.39□□□□□ -2.35
POLR1BQ9H9Y6 SCARNA16.5-201ENST00000517114 183 ntBASIC0.39□□□□□ -2.35
POLR1BQ9H9Y6 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.39□□□□□ -2.35
POLR1BQ9H9Y6 MIR3671-201ENST00000580455 88 ntBASIC0.39□□□□□ -2.35
POLR1BQ9H9Y6 MIR4514-201ENST00000581410 57 ntBASIC0.39□□□□□ -2.35
POLR1BQ9H9Y6 SNORA25.18-201ENST00000607153 114 ntBASIC0.39□□□□□ -2.35
POLR1BQ9H9Y6 RNU7-10P-201ENST00000607194 63 ntBASIC0.39□□□□□ -2.35
POLR1BQ9H9Y6 U7.2-201ENST00000607576 63 ntBASIC0.39□□□□□ -2.35
POLR1BQ9H9Y6 MIR2909-201ENST00000617113 69 ntBASIC0.39□□□□□ -2.35
POLR1BQ9H9Y6 AC105081.1-201ENST00000617727 106 ntBASIC0.39□□□□□ -2.35
POLR1BQ9H9Y6 MIR6828-201ENST00000636181 60 ntBASIC0.39□□□□□ -2.35
POLR1BQ9H9Y6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms