Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC104984.5-201ENST00000586878 94 ntBASIC1.6□□□□□ -2.15
SEC61A2Q9H9S3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.15
SEC61A2Q9H9S3 HSBP1P2-201ENST00000299671 229 ntBASIC1.59□□□□□ -2.15
SEC61A2Q9H9S3 RNA5SP264-201ENST00000363115 107 ntBASIC1.59□□□□□ -2.15
SEC61A2Q9H9S3 Y_RNA.426-201ENST00000384068 113 ntBASIC1.59□□□□□ -2.15
SEC61A2Q9H9S3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SEC61A2Q9H9S3 RNU7-171P-201ENST00000459581 62 ntBASIC1.59□□□□□ -2.15
SEC61A2Q9H9S3 AC023790.1-201ENST00000482174 347 ntBASIC1.59□□□□□ -2.15
SEC61A2Q9H9S3 AC079140.2-201ENST00000506193 142 ntBASIC1.59□□□□□ -2.15
SEC61A2Q9H9S3 AP003716.2-201ENST00000528260 108 ntBASIC1.59□□□□□ -2.15
SEC61A2Q9H9S3 MIR3937-201ENST00000580135 106 ntBASIC1.59□□□□□ -2.15
SEC61A2Q9H9S3 MIR3124-201ENST00000582636 67 ntBASIC1.59□□□□□ -2.15
SEC61A2Q9H9S3 AL627230.6-201ENST00000611129 280 ntBASIC1.59□□□□□ -2.15
SEC61A2Q9H9S3 MIR8081-201ENST00000611533 95 ntBASIC1.59□□□□□ -2.15
SEC61A2Q9H9S3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SEC61A2Q9H9S3 RNU6-633P-201ENST00000362612 103 ntBASIC1.58□□□□□ -2.16
SEC61A2Q9H9S3 RNA5SP233-201ENST00000459153 113 ntBASIC1.58□□□□□ -2.16
SEC61A2Q9H9S3 RNA5SP182-201ENST00000516064 82 ntBASIC1.58□□□□□ -2.16
SEC61A2Q9H9S3 RNU6-850P-201ENST00000516934 103 ntBASIC1.58□□□□□ -2.16
SEC61A2Q9H9S3 AC084768.2-201ENST00000622736 221 ntBASIC1.58□□□□□ -2.16
SEC61A2Q9H9S3 AC006160.2-201ENST00000637708 154 ntBASIC1.58□□□□□ -2.16
SEC61A2Q9H9S3 MIR302D-201ENST00000362275 68 ntBASIC1.57□□□□□ -2.16
SEC61A2Q9H9S3 Y_RNA.57-201ENST00000362806 113 ntBASIC1.57□□□□□ -2.16
SEC61A2Q9H9S3 MIR30A-201ENST00000385092 71 ntBASIC1.57□□□□□ -2.16
SEC61A2Q9H9S3 MT-TN-201ENST00000387400 73 ntBASIC1.57□□□□□ -2.16
SEC61A2Q9H9S3 RNU6-519P-201ENST00000410590 108 ntBASIC1.57□□□□□ -2.16
SEC61A2Q9H9S3 RPL30P7-201ENST00000479312 323 ntBASIC1.57□□□□□ -2.16
SEC61A2Q9H9S3 MIR8066-201ENST00000617280 78 ntBASIC1.57□□□□□ -2.16
SEC61A2Q9H9S3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
SEC61A2Q9H9S3 SNORD93-201ENST00000408813 74 ntBASIC1.56□□□□□ -2.16
SEC61A2Q9H9S3 SNORA25.16-201ENST00000516741 121 ntBASIC1.56□□□□□ -2.16
SEC61A2Q9H9S3 MIR4666B-201ENST00000578142 81 ntBASIC1.56□□□□□ -2.16
SEC61A2Q9H9S3 AL096840.1-201ENST00000603287 93 ntBASIC1.56□□□□□ -2.16
SEC61A2Q9H9S3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.56□□□□□ -2.16
SEC61A2Q9H9S3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SEC61A2Q9H9S3 RNU6-403P-201ENST00000363163 104 ntBASIC1.55□□□□□ -2.16
SEC61A2Q9H9S3 RNU6-652P-201ENST00000365488 107 ntBASIC1.55□□□□□ -2.16
SEC61A2Q9H9S3 RNU6-524P-201ENST00000384270 107 ntBASIC1.55□□□□□ -2.16
SEC61A2Q9H9S3 SNORA72.6-201ENST00000384520 129 ntBASIC1.55□□□□□ -2.16
SEC61A2Q9H9S3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SEC61A2Q9H9S3 AL161932.1-201ENST00000437408 146 ntBASIC1.55□□□□□ -2.16
SEC61A2Q9H9S3 SNRPGP12-201ENST00000449481 213 ntBASIC1.55□□□□□ -2.16
SEC61A2Q9H9S3 snoU13.21-201ENST00000459368 105 ntBASIC1.55□□□□□ -2.16
SEC61A2Q9H9S3 RNU6-531P-201ENST00000516694 104 ntBASIC1.55□□□□□ -2.16
SEC61A2Q9H9S3 RNU6-165P-201ENST00000517170 99 ntBASIC1.55□□□□□ -2.16
SEC61A2Q9H9S3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.55□□□□□ -2.16
SEC61A2Q9H9S3 MIR3664-201ENST00000579074 99 ntBASIC1.55□□□□□ -2.16
SEC61A2Q9H9S3 MIR4491-201ENST00000581087 68 ntBASIC1.55□□□□□ -2.16
SEC61A2Q9H9S3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.55□□□□□ -2.16
SEC61A2Q9H9S3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.54□□□□□ -2.16
SEC61A2Q9H9S3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.54□□□□□ -2.16
SEC61A2Q9H9S3 SNORA26.9-201ENST00000391322 122 ntBASIC1.54□□□□□ -2.16
SEC61A2Q9H9S3 AC015818.7-201ENST00000428754 109 ntBASIC1.54□□□□□ -2.16
SEC61A2Q9H9S3 AC087499.7-201ENST00000441958 109 ntBASIC1.54□□□□□ -2.16
SEC61A2Q9H9S3 RNU11-2P-201ENST00000516898 142 ntBASIC1.54□□□□□ -2.16
SEC61A2Q9H9S3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.54□□□□□ -2.16
SEC61A2Q9H9S3 RNU4-32P-201ENST00000363404 141 ntBASIC1.53□□□□□ -2.16
SEC61A2Q9H9S3 RNA5SP99-201ENST00000364020 114 ntBASIC1.53□□□□□ -2.16
SEC61A2Q9H9S3 MIR519C-201ENST00000385053 87 ntBASIC1.53□□□□□ -2.16
SEC61A2Q9H9S3 MT-TF-201ENST00000387314 71 ntBASIC1.53□□□□□ -2.16
SEC61A2Q9H9S3 snoU13.23-201ENST00000458863 104 ntBASIC1.53□□□□□ -2.16
SEC61A2Q9H9S3 SNORA44.1-201ENST00000517031 108 ntBASIC1.53□□□□□ -2.16
SEC61A2Q9H9S3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SEC61A2Q9H9S3 Y_RNA.244-201ENST00000364484 109 ntBASIC1.52□□□□□ -2.17
SEC61A2Q9H9S3 MIR516A2-201ENST00000384888 90 ntBASIC1.52□□□□□ -2.17
SEC61A2Q9H9S3 MIR516A1-201ENST00000385033 90 ntBASIC1.52□□□□□ -2.17
SEC61A2Q9H9S3 SNORD83.1-201ENST00000411362 77 ntBASIC1.52□□□□□ -2.17
SEC61A2Q9H9S3 AC048334.1-201ENST00000477975 159 ntBASIC1.52□□□□□ -2.17
SEC61A2Q9H9S3 AC108210.2-201ENST00000503681 201 ntBASIC1.52□□□□□ -2.17
SEC61A2Q9H9S3 RNU7-153P-201ENST00000516455 62 ntBASIC1.52□□□□□ -2.17
SEC61A2Q9H9S3 RNA5SP395-201ENST00000516567 118 ntBASIC1.52□□□□□ -2.17
SEC61A2Q9H9S3 RNU6-548P-201ENST00000517083 115 ntBASIC1.52□□□□□ -2.17
SEC61A2Q9H9S3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.52□□□□□ -2.17
SEC61A2Q9H9S3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.52□□□□□ -2.17
SEC61A2Q9H9S3 AL512310.8-201ENST00000550183 120 ntBASIC1.52□□□□□ -2.17
SEC61A2Q9H9S3 AC015712.3-201ENST00000559380 164 ntBASIC1.52□□□□□ -2.17
SEC61A2Q9H9S3 MIR4524B-201ENST00000581569 115 ntBASIC1.52□□□□□ -2.17
SEC61A2Q9H9S3 AC023934.1-201ENST00000574529 2389 ntBASIC1.51□□□□□ -2.17
SEC61A2Q9H9S3 MIR377-201ENST00000362145 69 ntBASIC1.51□□□□□ -2.17
SEC61A2Q9H9S3 RNU1-36P-201ENST00000365130 165 ntBASIC1.51□□□□□ -2.17
SEC61A2Q9H9S3 RNU6-571P-201ENST00000384128 107 ntBASIC1.51□□□□□ -2.17
SEC61A2Q9H9S3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SEC61A2Q9H9S3 Y_RNA.588-201ENST00000391254 102 ntBASIC1.51□□□□□ -2.17
SEC61A2Q9H9S3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.51□□□□□ -2.17
SEC61A2Q9H9S3 Y_RNA.607-201ENST00000410597 98 ntBASIC1.51□□□□□ -2.17
SEC61A2Q9H9S3 SNORD33-201ENST00000362761 85 ntBASIC1.5□□□□□ -2.17
SEC61A2Q9H9S3 SNORD48-201ENST00000364953 64 ntBASIC1.5□□□□□ -2.17
SEC61A2Q9H9S3 RNU6-580P-201ENST00000365159 107 ntBASIC1.5□□□□□ -2.17
SEC61A2Q9H9S3 SNORD4B-201ENST00000459083 72 ntBASIC1.5□□□□□ -2.17
SEC61A2Q9H9S3 SNORD13-201ENST00000459299 104 ntBASIC1.5□□□□□ -2.17
SEC61A2Q9H9S3 RNU6-857P-201ENST00000515893 110 ntBASIC1.5□□□□□ -2.17
SEC61A2Q9H9S3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.5□□□□□ -2.17
SEC61A2Q9H9S3 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.5□□□□□ -2.17
SEC61A2Q9H9S3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.5□□□□□ -2.17
SEC61A2Q9H9S3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SEC61A2Q9H9S3 RNU1-17P-201ENST00000363022 152 ntBASIC1.49□□□□□ -2.17
SEC61A2Q9H9S3 RNA5SP363-201ENST00000365072 115 ntBASIC1.49□□□□□ -2.17
SEC61A2Q9H9S3 Y_RNA.316-201ENST00000365118 111 ntBASIC1.49□□□□□ -2.17
SEC61A2Q9H9S3 RNU6-53P-201ENST00000365367 106 ntBASIC1.49□□□□□ -2.17
SEC61A2Q9H9S3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms