Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC108667.1-201ENST00000428618 249 ntBASIC1.8□□□□□ -2.12
RNF38Q9H0F5 AC245517.4-201ENST00000448601 281 ntBASIC1.8□□□□□ -2.12
RNF38Q9H0F5 snoU13.25-201ENST00000458945 104 ntBASIC1.8□□□□□ -2.12
RNF38Q9H0F5 RNA5SP458-201ENST00000516188 119 ntBASIC1.8□□□□□ -2.12
RNF38Q9H0F5 AL513043.2-201ENST00000573941 143 ntBASIC1.8□□□□□ -2.12
RNF38Q9H0F5 AL357312.1-201ENST00000603879 298 ntBASIC1.8□□□□□ -2.12
RNF38Q9H0F5 GHRLOS.1-201ENST00000610995 70 ntBASIC1.8□□□□□ -2.12
RNF38Q9H0F5 AC025521.1-201ENST00000621624 286 ntBASIC1.8□□□□□ -2.12
RNF38Q9H0F5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
RNF38Q9H0F5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RNF38Q9H0F5 Y_RNA.173-201ENST00000363776 113 ntBASIC1.79□□□□□ -2.12
RNF38Q9H0F5 RNU6-396P-201ENST00000365369 105 ntBASIC1.79□□□□□ -2.12
RNF38Q9H0F5 RNU6-787P-201ENST00000384032 107 ntBASIC1.79□□□□□ -2.12
RNF38Q9H0F5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.79□□□□□ -2.12
RNF38Q9H0F5 MIR4255-201ENST00000579351 72 ntBASIC1.79□□□□□ -2.12
RNF38Q9H0F5 MIR4285-201ENST00000581001 85 ntBASIC1.79□□□□□ -2.12
RNF38Q9H0F5 U6.109-201ENST00000636749 87 ntBASIC1.79□□□□□ -2.12
RNF38Q9H0F5 SNORA2B-201ENST00000384583 137 ntBASIC1.78□□□□□ -2.12
RNF38Q9H0F5 MIR4500-201ENST00000579472 76 ntBASIC1.78□□□□□ -2.12
RNF38Q9H0F5 AP000753.3-201ENST00000604083 169 ntBASIC1.78□□□□□ -2.12
RNF38Q9H0F5 MIR548BB-201ENST00000626714 66 ntBASIC1.78□□□□□ -2.12
RNF38Q9H0F5 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
RNF38Q9H0F5 RNU6-509P-201ENST00000363519 107 ntBASIC1.77□□□□□ -2.13
RNF38Q9H0F5 SNORD115-27-201ENST00000364430 82 ntBASIC1.77□□□□□ -2.13
RNF38Q9H0F5 Y_RNA.313-201ENST00000365095 103 ntBASIC1.77□□□□□ -2.13
RNF38Q9H0F5 Y_RNA.426-201ENST00000384068 113 ntBASIC1.77□□□□□ -2.13
RNF38Q9H0F5 RNA5SP95-201ENST00000410319 137 ntBASIC1.77□□□□□ -2.13
RNF38Q9H0F5 RNU7-62P-201ENST00000458856 62 ntBASIC1.77□□□□□ -2.13
RNF38Q9H0F5 AC138749.4-201ENST00000563970 127 ntBASIC1.77□□□□□ -2.13
RNF38Q9H0F5 uc_338.6-201ENST00000613544 171 ntBASIC1.77□□□□□ -2.13
RNF38Q9H0F5 AC006160.2-201ENST00000637708 154 ntBASIC1.77□□□□□ -2.13
RNF38Q9H0F5 AL161722.3-201ENST00000605789 2983 ntBASIC1.77□□□□□ -2.13
RNF38Q9H0F5 RNY1P2-201ENST00000364820 117 ntBASIC1.76□□□□□ -2.13
RNF38Q9H0F5 RNU6-1165P-201ENST00000410119 107 ntBASIC1.76□□□□□ -2.13
RNF38Q9H0F5 RNU6-613P-201ENST00000410412 108 ntBASIC1.76□□□□□ -2.13
RNF38Q9H0F5 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.76□□□□□ -2.13
RNF38Q9H0F5 RNU6-902P-201ENST00000517212 91 ntBASIC1.76□□□□□ -2.13
RNF38Q9H0F5 SNORA4-201ENST00000584302 138 ntBASIC1.76□□□□□ -2.13
RNF38Q9H0F5 MIR502-201ENST00000606349 86 ntBASIC1.76□□□□□ -2.13
RNF38Q9H0F5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
RNF38Q9H0F5 RNA5SP133-201ENST00000363368 119 ntBASIC1.75□□□□□ -2.13
RNF38Q9H0F5 Y_RNA.168-201ENST00000363740 102 ntBASIC1.75□□□□□ -2.13
RNF38Q9H0F5 RNU6-654P-201ENST00000364373 107 ntBASIC1.75□□□□□ -2.13
RNF38Q9H0F5 RNU6-480P-201ENST00000384332 107 ntBASIC1.75□□□□□ -2.13
RNF38Q9H0F5 RPS27P16-201ENST00000425758 201 ntBASIC1.75□□□□□ -2.13
RNF38Q9H0F5 BX276092.1-201ENST00000427368 251 ntBASIC1.75□□□□□ -2.13
RNF38Q9H0F5 RNU7-171P-201ENST00000459581 62 ntBASIC1.75□□□□□ -2.13
RNF38Q9H0F5 MIR4303-201ENST00000581299 66 ntBASIC1.75□□□□□ -2.13
RNF38Q9H0F5 MIR4264-201ENST00000583520 66 ntBASIC1.75□□□□□ -2.13
RNF38Q9H0F5 MIR6516-201ENST00000630554 81 ntBASIC1.75□□□□□ -2.13
RNF38Q9H0F5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
RNF38Q9H0F5 HSBP1P2-201ENST00000299671 229 ntBASIC1.74□□□□□ -2.13
RNF38Q9H0F5 MIR103A2-201ENST00000362154 78 ntBASIC1.74□□□□□ -2.13
RNF38Q9H0F5 MIR30D-201ENST00000362283 70 ntBASIC1.74□□□□□ -2.13
RNF38Q9H0F5 RNU6-633P-201ENST00000362612 103 ntBASIC1.74□□□□□ -2.13
RNF38Q9H0F5 MIR563-201ENST00000385080 79 ntBASIC1.74□□□□□ -2.13
RNF38Q9H0F5 RNU4-83P-201ENST00000410863 133 ntBASIC1.74□□□□□ -2.13
RNF38Q9H0F5 RPL30P7-201ENST00000479312 323 ntBASIC1.74□□□□□ -2.13
RNF38Q9H0F5 MIR2115-201ENST00000516657 100 ntBASIC1.74□□□□□ -2.13
RNF38Q9H0F5 Y_RNA.57-201ENST00000362806 113 ntBASIC1.73□□□□□ -2.13
RNF38Q9H0F5 Y_RNA.119-201ENST00000363301 96 ntBASIC1.73□□□□□ -2.13
RNF38Q9H0F5 SNORD48-201ENST00000364953 64 ntBASIC1.73□□□□□ -2.13
RNF38Q9H0F5 RNU6-652P-201ENST00000365488 107 ntBASIC1.73□□□□□ -2.13
RNF38Q9H0F5 MIR1185-1-201ENST00000408598 86 ntBASIC1.73□□□□□ -2.13
RNF38Q9H0F5 AL512310.8-201ENST00000550183 120 ntBASIC1.73□□□□□ -2.13
RNF38Q9H0F5 MIR4666B-201ENST00000578142 81 ntBASIC1.73□□□□□ -2.13
RNF38Q9H0F5 MIR3664-201ENST00000579074 99 ntBASIC1.73□□□□□ -2.13
RNF38Q9H0F5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RNF38Q9H0F5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RNF38Q9H0F5 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
RNF38Q9H0F5 RNU4-62P-201ENST00000410125 130 ntBASIC1.72□□□□□ -2.13
RNF38Q9H0F5 AC023790.1-201ENST00000482174 347 ntBASIC1.72□□□□□ -2.13
RNF38Q9H0F5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RNF38Q9H0F5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.71□□□□□ -2.14
RNF38Q9H0F5 RNU6-519P-201ENST00000410590 108 ntBASIC1.71□□□□□ -2.14
RNF38Q9H0F5 SNRPGP12-201ENST00000449481 213 ntBASIC1.71□□□□□ -2.14
RNF38Q9H0F5 RNU6-850P-201ENST00000516934 103 ntBASIC1.71□□□□□ -2.14
RNF38Q9H0F5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RNF38Q9H0F5 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RNF38Q9H0F5 RNA5SP264-201ENST00000363115 107 ntBASIC1.7□□□□□ -2.14
RNF38Q9H0F5 Y_RNA.244-201ENST00000364484 109 ntBASIC1.7□□□□□ -2.14
RNF38Q9H0F5 RNU6-524P-201ENST00000384270 107 ntBASIC1.7□□□□□ -2.14
RNF38Q9H0F5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
RNF38Q9H0F5 SNORA67.5-201ENST00000391036 107 ntBASIC1.7□□□□□ -2.14
RNF38Q9H0F5 AL161932.1-201ENST00000437408 146 ntBASIC1.7□□□□□ -2.14
RNF38Q9H0F5 AL133373.1-201ENST00000497098 94 ntBASIC1.7□□□□□ -2.14
RNF38Q9H0F5 RNA5SP395-201ENST00000516567 118 ntBASIC1.7□□□□□ -2.14
RNF38Q9H0F5 MIR8066-201ENST00000617280 78 ntBASIC1.7□□□□□ -2.14
RNF38Q9H0F5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RNF38Q9H0F5 SNORA72.6-201ENST00000384520 129 ntBASIC1.69□□□□□ -2.14
RNF38Q9H0F5 MT-TN-201ENST00000387400 73 ntBASIC1.69□□□□□ -2.14
RNF38Q9H0F5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.69□□□□□ -2.14
RNF38Q9H0F5 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.69□□□□□ -2.14
RNF38Q9H0F5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RNF38Q9H0F5 RNU4-32P-201ENST00000363404 141 ntBASIC1.68□□□□□ -2.14
RNF38Q9H0F5 RNA5SP363-201ENST00000365072 115 ntBASIC1.68□□□□□ -2.14
RNF38Q9H0F5 MIR519C-201ENST00000385053 87 ntBASIC1.68□□□□□ -2.14
RNF38Q9H0F5 AC087499.7-201ENST00000441958 109 ntBASIC1.68□□□□□ -2.14
RNF38Q9H0F5 RNU6-857P-201ENST00000515893 110 ntBASIC1.68□□□□□ -2.14
RNF38Q9H0F5 AP003716.2-201ENST00000528260 108 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 1232.3 ms