Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 SNORA3A-201ENST00000364113 130 ntBASIC2.16□□□□□ -2.06
CNTNAP4Q9C0A0 MIR1265-201ENST00000408444 86 ntBASIC2.16□□□□□ -2.06
CNTNAP4Q9C0A0 RNU6-539P-201ENST00000516665 103 ntBASIC2.16□□□□□ -2.06
CNTNAP4Q9C0A0 RNU7-193P-201ENST00000516723 65 ntBASIC2.16□□□□□ -2.06
CNTNAP4Q9C0A0 AC121758.2-201ENST00000553271 193 ntBASIC2.16□□□□□ -2.06
CNTNAP4Q9C0A0 RNU6-90P-201ENST00000606352 106 ntBASIC2.16□□□□□ -2.06
CNTNAP4Q9C0A0 MIR6895-201ENST00000613497 78 ntBASIC2.16□□□□□ -2.06
CNTNAP4Q9C0A0 AC105081.1-201ENST00000617727 106 ntBASIC2.16□□□□□ -2.06
CNTNAP4Q9C0A0 MIR4251-201ENST00000635819 61 ntBASIC2.16□□□□□ -2.06
CNTNAP4Q9C0A0 SNORA67.1-201ENST00000364749 141 ntBASIC2.15□□□□□ -2.07
CNTNAP4Q9C0A0 SNORD38.2-201ENST00000384470 69 ntBASIC2.15□□□□□ -2.07
CNTNAP4Q9C0A0 Y_RNA.532-201ENST00000384590 113 ntBASIC2.15□□□□□ -2.07
CNTNAP4Q9C0A0 AC012676.2-201ENST00000619258 186 ntBASIC2.15□□□□□ -2.07
CNTNAP4Q9C0A0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.15□□□□□ -2.07
CNTNAP4Q9C0A0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CNTNAP4Q9C0A0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CNTNAP4Q9C0A0 Y_RNA.98-201ENST00000363109 102 ntBASIC2.14□□□□□ -2.07
CNTNAP4Q9C0A0 RNU6-203P-201ENST00000384038 104 ntBASIC2.14□□□□□ -2.07
CNTNAP4Q9C0A0 RNA5SP338-201ENST00000410495 85 ntBASIC2.14□□□□□ -2.07
CNTNAP4Q9C0A0 AL161935.2-201ENST00000414627 60 ntBASIC2.14□□□□□ -2.07
CNTNAP4Q9C0A0 JTBP1-201ENST00000441314 247 ntBASIC2.14□□□□□ -2.07
CNTNAP4Q9C0A0 SPINT5P-201ENST00000448174 155 ntBASIC2.14□□□□□ -2.07
CNTNAP4Q9C0A0 RNU7-137P-201ENST00000516788 62 ntBASIC2.14□□□□□ -2.07
CNTNAP4Q9C0A0 MIR5694-201ENST00000581190 76 ntBASIC2.14□□□□□ -2.07
CNTNAP4Q9C0A0 AL645939.4-201ENST00000604495 135 ntBASIC2.14□□□□□ -2.07
CNTNAP4Q9C0A0 AC245884.12-201ENST00000615364 59 ntBASIC2.14□□□□□ -2.07
CNTNAP4Q9C0A0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.13□□□□□ -2.07
CNTNAP4Q9C0A0 SNORD115-37-201ENST00000363768 82 ntBASIC2.13□□□□□ -2.07
CNTNAP4Q9C0A0 Y_RNA.178-201ENST00000363832 102 ntBASIC2.13□□□□□ -2.07
CNTNAP4Q9C0A0 RNA5SP48-201ENST00000363969 126 ntBASIC2.13□□□□□ -2.07
CNTNAP4Q9C0A0 RNU6-865P-201ENST00000364772 107 ntBASIC2.13□□□□□ -2.07
CNTNAP4Q9C0A0 RNU6-392P-201ENST00000364926 101 ntBASIC2.13□□□□□ -2.07
CNTNAP4Q9C0A0 MIR524-201ENST00000385242 87 ntBASIC2.13□□□□□ -2.07
CNTNAP4Q9C0A0 SNORD4B-201ENST00000459083 72 ntBASIC2.13□□□□□ -2.07
CNTNAP4Q9C0A0 AL357312.1-201ENST00000603879 298 ntBASIC2.13□□□□□ -2.07
CNTNAP4Q9C0A0 AP000553.5-201ENST00000641933 54 ntBASIC2.13□□□□□ -2.07
CNTNAP4Q9C0A0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CNTNAP4Q9C0A0 AC131280.1-202ENST00000624067 4211 ntBASIC2.12□□□□□ -2.07
CNTNAP4Q9C0A0 MIRLET7A1-201ENST00000362295 80 ntBASIC2.12□□□□□ -2.07
CNTNAP4Q9C0A0 Y_RNA.386-201ENST00000383913 105 ntBASIC2.12□□□□□ -2.07
CNTNAP4Q9C0A0 MIR4419B-201ENST00000577260 68 ntBASIC2.12□□□□□ -2.07
CNTNAP4Q9C0A0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.12□□□□□ -2.07
CNTNAP4Q9C0A0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.12□□□□□ -2.07
CNTNAP4Q9C0A0 RNU6-1094P-201ENST00000362416 104 ntBASIC2.11□□□□□ -2.07
CNTNAP4Q9C0A0 RNA5SP138-201ENST00000365098 114 ntBASIC2.11□□□□□ -2.07
CNTNAP4Q9C0A0 RNU7-85P-201ENST00000458851 63 ntBASIC2.11□□□□□ -2.07
CNTNAP4Q9C0A0 AC055731.1-201ENST00000474387 401 ntBASIC2.11□□□□□ -2.07
CNTNAP4Q9C0A0 RNU6-1015P-201ENST00000517121 99 ntBASIC2.11□□□□□ -2.07
CNTNAP4Q9C0A0 MIR548AO-201ENST00000579992 96 ntBASIC2.11□□□□□ -2.07
CNTNAP4Q9C0A0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CNTNAP4Q9C0A0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CNTNAP4Q9C0A0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
CNTNAP4Q9C0A0 RNU4-32P-201ENST00000363404 141 ntBASIC2.1□□□□□ -2.07
CNTNAP4Q9C0A0 RNU6-519P-201ENST00000410590 108 ntBASIC2.1□□□□□ -2.07
CNTNAP4Q9C0A0 RNU7-48P-201ENST00000458875 63 ntBASIC2.1□□□□□ -2.07
CNTNAP4Q9C0A0 Y_RNA.327-201ENST00000365201 102 ntBASIC2.09□□□□□ -2.08
CNTNAP4Q9C0A0 MIR1236-201ENST00000408340 102 ntBASIC2.09□□□□□ -2.08
CNTNAP4Q9C0A0 RNU4-83P-201ENST00000410863 133 ntBASIC2.09□□□□□ -2.08
CNTNAP4Q9C0A0 RNU6-557P-201ENST00000516842 110 ntBASIC2.09□□□□□ -2.08
CNTNAP4Q9C0A0 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.09□□□□□ -2.08
CNTNAP4Q9C0A0 Y_RNA.36-201ENST00000362602 112 ntBASIC2.08□□□□□ -2.08
CNTNAP4Q9C0A0 SNORA63.2-201ENST00000362603 126 ntBASIC2.08□□□□□ -2.08
CNTNAP4Q9C0A0 MIR513A1-201ENST00000385138 129 ntBASIC2.08□□□□□ -2.08
CNTNAP4Q9C0A0 SNORD23.1-201ENST00000408212 104 ntBASIC2.08□□□□□ -2.08
CNTNAP4Q9C0A0 RNA5SP237-201ENST00000410414 113 ntBASIC2.08□□□□□ -2.08
CNTNAP4Q9C0A0 AC005908.1-201ENST00000468701 347 ntBASIC2.08□□□□□ -2.08
CNTNAP4Q9C0A0 AC008163.1-202ENST00000636004 2889 ntBASIC2.07□□□□□ -2.08
CNTNAP4Q9C0A0 HSBP1P2-201ENST00000299671 229 ntBASIC2.07□□□□□ -2.08
CNTNAP4Q9C0A0 Y_RNA.340-201ENST00000365330 92 ntBASIC2.07□□□□□ -2.08
CNTNAP4Q9C0A0 RNU6-480P-201ENST00000384332 107 ntBASIC2.07□□□□□ -2.08
CNTNAP4Q9C0A0 MTND5P40-201ENST00000559945 246 ntBASIC2.07□□□□□ -2.08
CNTNAP4Q9C0A0 SNORD53B-201ENST00000577887 78 ntBASIC2.07□□□□□ -2.08
CNTNAP4Q9C0A0 AP001362.1-201ENST00000625165 124 ntBASIC2.07□□□□□ -2.08
CNTNAP4Q9C0A0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CNTNAP4Q9C0A0 Y_RNA.168-201ENST00000363740 102 ntBASIC2.06□□□□□ -2.08
CNTNAP4Q9C0A0 RNU1-42P-201ENST00000364033 160 ntBASIC2.06□□□□□ -2.08
CNTNAP4Q9C0A0 RNY1P13-201ENST00000365030 105 ntBASIC2.06□□□□□ -2.08
CNTNAP4Q9C0A0 RNA5SP259-201ENST00000365541 109 ntBASIC2.06□□□□□ -2.08
CNTNAP4Q9C0A0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.06□□□□□ -2.08
CNTNAP4Q9C0A0 AC009474.2-201ENST00000451383 136 ntBASIC2.06□□□□□ -2.08
CNTNAP4Q9C0A0 RNU7-41P-201ENST00000515917 61 ntBASIC2.06□□□□□ -2.08
CNTNAP4Q9C0A0 RNU6-687P-201ENST00000516443 89 ntBASIC2.06□□□□□ -2.08
CNTNAP4Q9C0A0 AL773524.1-201ENST00000614065 229 ntBASIC2.06□□□□□ -2.08
CNTNAP4Q9C0A0 MIR6515-201ENST00000619843 57 ntBASIC2.06□□□□□ -2.08
CNTNAP4Q9C0A0 PVT1_3.1-201ENST00000620853 95 ntBASIC2.06□□□□□ -2.08
CNTNAP4Q9C0A0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CNTNAP4Q9C0A0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CNTNAP4Q9C0A0 RNU6-161P-201ENST00000363051 106 ntBASIC2.05□□□□□ -2.08
CNTNAP4Q9C0A0 Y_RNA.205-201ENST00000364128 113 ntBASIC2.05□□□□□ -2.08
CNTNAP4Q9C0A0 RNU6-686P-201ENST00000364839 107 ntBASIC2.05□□□□□ -2.08
CNTNAP4Q9C0A0 RNU6-411P-201ENST00000384451 107 ntBASIC2.05□□□□□ -2.08
CNTNAP4Q9C0A0 MIR520H-201ENST00000385126 88 ntBASIC2.05□□□□□ -2.08
CNTNAP4Q9C0A0 RNA5SP292-201ENST00000390974 118 ntBASIC2.05□□□□□ -2.08
CNTNAP4Q9C0A0 HMGN2P38-201ENST00000423806 265 ntBASIC2.05□□□□□ -2.08
CNTNAP4Q9C0A0 AC141846.1-201ENST00000568348 142 ntBASIC2.05□□□□□ -2.08
CNTNAP4Q9C0A0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.05□□□□□ -2.08
CNTNAP4Q9C0A0 MIR664A-201ENST00000626086 82 ntBASIC2.05□□□□□ -2.08
CNTNAP4Q9C0A0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CNTNAP4Q9C0A0 RNY1P2-201ENST00000364820 117 ntBASIC2.04□□□□□ -2.08
CNTNAP4Q9C0A0 RNU6-396P-201ENST00000365369 105 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 211.4 ms