Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC016252.1-201ENST00000609721 474 ntBASIC-1.83□□□□□ -2.7
COL12A1Q99715 AC011476.5-201ENST00000615594 130 ntBASIC-1.83□□□□□ -2.7
COL12A1Q99715 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.83□□□□□ -2.7
COL12A1Q99715 AC024067.1-201ENST00000426199 223 ntBASIC-1.83□□□□□ -2.7
COL12A1Q99715 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-1.83□□□□□ -2.7
COL12A1Q99715 AC005828.6-201ENST00000606610 232 ntBASIC-1.83□□□□□ -2.7
COL12A1Q99715 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.83□□□□□ -2.7
COL12A1Q99715 SNORA63-201ENST00000363450 132 ntBASIC-1.84□□□□□ -2.7
COL12A1Q99715 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.84□□□□□ -2.7
COL12A1Q99715 RNU6-788P-201ENST00000390967 104 ntBASIC-1.84□□□□□ -2.7
COL12A1Q99715 AL117351.1-201ENST00000438864 766 ntBASIC-1.84□□□□□ -2.7
COL12A1Q99715 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.84□□□□□ -2.7
COL12A1Q99715 MIR4426-201ENST00000640330 63 ntBASIC-1.84□□□□□ -2.7
COL12A1Q99715 RNU7-106P-201ENST00000459514 67 ntBASIC-1.84□□□□□ -2.7
COL12A1Q99715 RPS29P25-201ENST00000481709 171 ntBASIC-1.84□□□□□ -2.7
COL12A1Q99715 RNU6-693P-201ENST00000516134 107 ntBASIC-1.84□□□□□ -2.7
COL12A1Q99715 AC092574.1-201ENST00000609771 420 ntBASIC-1.84□□□□□ -2.7
COL12A1Q99715 MTCO2P3-201ENST00000442543 421 ntBASIC-1.85□□□□□ -2.7
COL12A1Q99715 SEPT14P8-201ENST00000508026 178 ntBASIC-1.85□□□□□ -2.7
COL12A1Q99715 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.85□□□□□ -2.7
COL12A1Q99715 RNU6-318P-201ENST00000384283 103 ntBASIC-1.85□□□□□ -2.71
COL12A1Q99715 MIR206-201ENST00000384872 86 ntBASIC-1.85□□□□□ -2.71
COL12A1Q99715 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.85□□□□□ -2.71
COL12A1Q99715 U3.27-201ENST00000391237 200 ntBASIC-1.85□□□□□ -2.71
COL12A1Q99715 AC073539.2-201ENST00000597113 165 ntBASIC-1.85□□□□□ -2.71
COL12A1Q99715 AC092747.3-201ENST00000603769 301 ntBASIC-1.85□□□□□ -2.71
COL12A1Q99715 MIR6509-201ENST00000614603 85 ntBASIC-1.85□□□□□ -2.71
COL12A1Q99715 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.85□□□□□ -2.71
COL12A1Q99715 SNORA33.1-201ENST00000364957 130 ntBASIC-1.85□□□□□ -2.71
COL12A1Q99715 RNU6-243P-201ENST00000391140 107 ntBASIC-1.85□□□□□ -2.71
COL12A1Q99715 RNU2-66P-201ENST00000410650 161 ntBASIC-1.85□□□□□ -2.71
COL12A1Q99715 AC009961.2-201ENST00000435771 251 ntBASIC-1.85□□□□□ -2.71
COL12A1Q99715 AC006254.2-201ENST00000603259 279 ntBASIC-1.85□□□□□ -2.71
COL12A1Q99715 U6.115-201ENST00000636045 103 ntBASIC-1.85□□□□□ -2.71
COL12A1Q99715 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.86□□□□□ -2.71
COL12A1Q99715 RNU6-598P-201ENST00000364017 105 ntBASIC-1.86□□□□□ -2.71
COL12A1Q99715 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.86□□□□□ -2.71
COL12A1Q99715 ELOCP17-201ENST00000414751 326 ntBASIC-1.86□□□□□ -2.71
COL12A1Q99715 RNU6-150P-201ENST00000516237 95 ntBASIC-1.86□□□□□ -2.71
COL12A1Q99715 AC091144.1-201ENST00000519573 138 ntBASIC-1.86□□□□□ -2.71
COL12A1Q99715 AP002782.1-201ENST00000623107 614 ntBASIC-1.86□□□□□ -2.71
COL12A1Q99715 SNORD36A-201ENST00000362874 73 ntBASIC-1.86□□□□□ -2.71
COL12A1Q99715 RNU6-280P-201ENST00000364145 104 ntBASIC-1.86□□□□□ -2.71
COL12A1Q99715 RNA5SP224-201ENST00000365069 126 ntBASIC-1.86□□□□□ -2.71
COL12A1Q99715 RNU6-564P-201ENST00000410983 104 ntBASIC-1.86□□□□□ -2.71
COL12A1Q99715 RNU6-176P-201ENST00000517196 105 ntBASIC-1.86□□□□□ -2.71
COL12A1Q99715 AC062037.1-201ENST00000605302 128 ntBASIC-1.86□□□□□ -2.71
COL12A1Q99715 RMST_3.1-201ENST00000611651 109 ntBASIC-1.86□□□□□ -2.71
COL12A1Q99715 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.87□□□□□ -2.71
COL12A1Q99715 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.87□□□□□ -2.71
COL12A1Q99715 SNORD72-201ENST00000390994 80 ntBASIC-1.87□□□□□ -2.71
COL12A1Q99715 MIR2681-201ENST00000581814 105 ntBASIC-1.87□□□□□ -2.71
COL12A1Q99715 RNU6-254P-201ENST00000363377 107 ntBASIC-1.87□□□□□ -2.71
COL12A1Q99715 RNU6-938P-201ENST00000411285 103 ntBASIC-1.87□□□□□ -2.71
COL12A1Q99715 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.87□□□□□ -2.71
COL12A1Q99715 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1.87□□□□□ -2.71
COL12A1Q99715 RNU6-827P-201ENST00000365553 106 ntBASIC-1.87□□□□□ -2.71
COL12A1Q99715 RNA5SP144-201ENST00000410846 116 ntBASIC-1.87□□□□□ -2.71
COL12A1Q99715 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.87□□□□□ -2.71
COL12A1Q99715 AC245884.10-201ENST00000597355 337 ntBASIC-1.87□□□□□ -2.71
COL12A1Q99715 MIR4773-1-201ENST00000637203 78 ntBASIC-1.87□□□□□ -2.71
COL12A1Q99715 SNORD1B-201ENST00000363091 84 ntBASIC-1.88□□□□□ -2.71
COL12A1Q99715 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.88□□□□□ -2.71
COL12A1Q99715 RNU6-755P-201ENST00000364400 103 ntBASIC-1.88□□□□□ -2.71
COL12A1Q99715 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.88□□□□□ -2.71
COL12A1Q99715 MIR516A2-201ENST00000384888 90 ntBASIC-1.88□□□□□ -2.71
COL12A1Q99715 MIR516A1-201ENST00000385033 90 ntBASIC-1.88□□□□□ -2.71
COL12A1Q99715 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.88□□□□□ -2.71
COL12A1Q99715 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.88□□□□□ -2.71
COL12A1Q99715 RNU6-541P-201ENST00000384709 110 ntBASIC-1.88□□□□□ -2.71
COL12A1Q99715 RNU6-300P-201ENST00000459080 104 ntBASIC-1.88□□□□□ -2.71
COL12A1Q99715 RPL39P5-202ENST00000512505 151 ntBASIC-1.88□□□□□ -2.71
COL12A1Q99715 AC024909.2-201ENST00000553035 286 ntBASIC-1.88□□□□□ -2.71
COL12A1Q99715 MIR4696-201ENST00000581431 70 ntBASIC-1.88□□□□□ -2.71
COL12A1Q99715 MTND2P20-201ENST00000440805 661 ntBASIC-1.89□□□□□ -2.71
COL12A1Q99715 RNU7-48P-201ENST00000458875 63 ntBASIC-1.89□□□□□ -2.71
COL12A1Q99715 RNU7-70P-201ENST00000516941 66 ntBASIC-1.89□□□□□ -2.71
COL12A1Q99715 RNU6-801P-201ENST00000364087 105 ntBASIC-1.89□□□□□ -2.71
COL12A1Q99715 RNU6-289P-201ENST00000364093 107 ntBASIC-1.89□□□□□ -2.71
COL12A1Q99715 RNU7-45P-201ENST00000459460 63 ntBASIC-1.89□□□□□ -2.71
COL12A1Q99715 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.89□□□□□ -2.71
COL12A1Q99715 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.89□□□□□ -2.71
COL12A1Q99715 SNORD36C-201ENST00000516733 66 ntBASIC-1.89□□□□□ -2.71
COL12A1Q99715 AC026741.1-201ENST00000605892 482 ntBASIC-1.89□□□□□ -2.71
COL12A1Q99715 TRDV1-202ENST00000621643 102 ntBASIC-1.89□□□□□ -2.71
COL12A1Q99715 RNU7-80P-201ENST00000459562 61 ntBASIC-1.9□□□□□ -2.71
COL12A1Q99715 RNU7-116P-201ENST00000516940 62 ntBASIC-1.9□□□□□ -2.71
COL12A1Q99715 AC006566.1-201ENST00000608943 513 ntBASIC-1.9□□□□□ -2.71
COL12A1Q99715 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.9□□□□□ -2.71
COL12A1Q99715 RNU6-1122P-201ENST00000384449 107 ntBASIC-1.9□□□□□ -2.71
COL12A1Q99715 AL118496.2-201ENST00000448300 230 ntBASIC-1.9□□□□□ -2.71
COL12A1Q99715 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.9□□□□□ -2.71
COL12A1Q99715 MIR3657-201ENST00000584818 117 ntBASIC-1.9□□□□□ -2.71
COL12A1Q99715 AL445984.1-201ENST00000637834 659 ntBASIC-1.9□□□□□ -2.71
COL12A1Q99715 SNORD116-9-201ENST00000384000 95 ntBASIC-1.91□□□□□ -2.71
COL12A1Q99715 SNORD116-3-201ENST00000384287 95 ntBASIC-1.91□□□□□ -2.71
COL12A1Q99715 SNORD116-8-201ENST00000384365 95 ntBASIC-1.91□□□□□ -2.71
COL12A1Q99715 SNORD116-7-201ENST00000384404 95 ntBASIC-1.91□□□□□ -2.71
COL12A1Q99715 SNORD116-5-201ENST00000384462 95 ntBASIC-1.91□□□□□ -2.71
COL12A1Q99715 RNU6-1005P-201ENST00000384519 107 ntBASIC-1.91□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms