Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 RNU7-48P-201ENST00000458875 63 ntBASIC1.3□□□□□ -2.2
PNKPQ96T60 RNU6-904P-201ENST00000516206 101 ntBASIC1.3□□□□□ -2.2
PNKPQ96T60 RNU6-1018P-201ENST00000516577 106 ntBASIC1.3□□□□□ -2.2
PNKPQ96T60 DEFB131E-201ENST00000532329 154 ntBASIC1.3□□□□□ -2.2
PNKPQ96T60 AC133485.1-201ENST00000567176 124 ntBASIC1.3□□□□□ -2.2
PNKPQ96T60 AC106800.4-201ENST00000614905 153 ntBASIC1.3□□□□□ -2.2
PNKPQ96T60 Y_RNA.191-201ENST00000363972 113 ntBASIC1.29□□□□□ -2.2
PNKPQ96T60 RNU6-1113P-201ENST00000384348 107 ntBASIC1.29□□□□□ -2.2
PNKPQ96T60 MIR222-201ENST00000384992 110 ntBASIC1.29□□□□□ -2.2
PNKPQ96T60 MIR1285-1-201ENST00000408593 84 ntBASIC1.29□□□□□ -2.2
PNKPQ96T60 RNA5SP89-201ENST00000410300 108 ntBASIC1.29□□□□□ -2.2
PNKPQ96T60 RNU7-90P-201ENST00000459216 62 ntBASIC1.29□□□□□ -2.2
PNKPQ96T60 RNU6-168P-201ENST00000516189 101 ntBASIC1.29□□□□□ -2.2
PNKPQ96T60 RNU6-537P-201ENST00000517277 103 ntBASIC1.29□□□□□ -2.2
PNKPQ96T60 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
PNKPQ96T60 Y_RNA.78-201ENST00000362970 110 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 Y_RNA.247-201ENST00000364500 92 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 RNU6-934P-201ENST00000365154 107 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 RNU6-32P-201ENST00000383948 107 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 RNU6-13P-201ENST00000384248 107 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 RNU6-12P-201ENST00000384604 107 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 RNU6-41P-201ENST00000384741 107 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 SNORD111-201ENST00000408139 94 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 RNU6-447P-201ENST00000410293 104 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 RNU6-1118P-201ENST00000410382 104 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 RNU6-1076P-201ENST00000410397 104 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 RNU6-355P-201ENST00000410427 104 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 RNU6-791P-201ENST00000410467 104 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 RNU6-705P-201ENST00000410601 104 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 RNU6-1100P-201ENST00000410691 104 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 RNU6-860P-201ENST00000410860 104 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 RNU6-1217P-201ENST00000411276 104 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 RNU6-785P-201ENST00000411324 104 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 U6.90-201ENST00000614007 104 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 AL442128.1-201ENST00000615151 90 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 U6.70-201ENST00000620287 104 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 AC023934.1-201ENST00000574529 2389 ntBASIC1.28□□□□□ -2.2
PNKPQ96T60 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.21
PNKPQ96T60 Y_RNA.98-201ENST00000363109 102 ntBASIC1.27□□□□□ -2.21
PNKPQ96T60 RNU4-36P-201ENST00000364294 144 ntBASIC1.27□□□□□ -2.21
PNKPQ96T60 SNORD93-201ENST00000408813 74 ntBASIC1.27□□□□□ -2.21
PNKPQ96T60 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.27□□□□□ -2.21
PNKPQ96T60 AC138749.4-201ENST00000563970 127 ntBASIC1.27□□□□□ -2.21
PNKPQ96T60 MIR4452-201ENST00000583004 71 ntBASIC1.27□□□□□ -2.21
PNKPQ96T60 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.27□□□□□ -2.21
PNKPQ96T60 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.27□□□□□ -2.21
PNKPQ96T60 U6.109-201ENST00000636749 87 ntBASIC1.27□□□□□ -2.21
PNKPQ96T60 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
PNKPQ96T60 RNA5SP133-201ENST00000363368 119 ntBASIC1.26□□□□□ -2.21
PNKPQ96T60 RNU1-36P-201ENST00000365130 165 ntBASIC1.26□□□□□ -2.21
PNKPQ96T60 SNORA25-201ENST00000384384 134 ntBASIC1.26□□□□□ -2.21
PNKPQ96T60 AC002429.1-201ENST00000437672 148 ntBASIC1.26□□□□□ -2.21
PNKPQ96T60 RPS29P28-201ENST00000446439 141 ntBASIC1.26□□□□□ -2.21
PNKPQ96T60 RNU7-185P-201ENST00000459215 60 ntBASIC1.26□□□□□ -2.21
PNKPQ96T60 RNU7-40P-201ENST00000516397 64 ntBASIC1.26□□□□□ -2.21
PNKPQ96T60 RNU6-1006P-201ENST00000516998 103 ntBASIC1.26□□□□□ -2.21
PNKPQ96T60 MIR4771-2-201ENST00000577758 74 ntBASIC1.26□□□□□ -2.21
PNKPQ96T60 MIR4491-201ENST00000581087 68 ntBASIC1.26□□□□□ -2.21
PNKPQ96T60 MIR4771-1-201ENST00000582617 74 ntBASIC1.26□□□□□ -2.21
PNKPQ96T60 MIR7111-201ENST00000619751 72 ntBASIC1.26□□□□□ -2.21
PNKPQ96T60 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
PNKPQ96T60 Y_RNA.118-201ENST00000363300 101 ntBASIC1.25□□□□□ -2.21
PNKPQ96T60 RNY1P2-201ENST00000364820 117 ntBASIC1.25□□□□□ -2.21
PNKPQ96T60 Y_RNA.377-201ENST00000365644 108 ntBASIC1.25□□□□□ -2.21
PNKPQ96T60 SNORD26-201ENST00000384147 75 ntBASIC1.25□□□□□ -2.21
PNKPQ96T60 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
PNKPQ96T60 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.25□□□□□ -2.21
PNKPQ96T60 Y_RNA.601-201ENST00000410500 113 ntBASIC1.25□□□□□ -2.21
PNKPQ96T60 AC020891.4-201ENST00000605745 93 ntBASIC1.25□□□□□ -2.21
PNKPQ96T60 AP001318.4-201ENST00000616637 121 ntBASIC1.25□□□□□ -2.21
PNKPQ96T60 AP001362.1-201ENST00000625165 124 ntBASIC1.25□□□□□ -2.21
PNKPQ96T60 AC091304.10-201ENST00000641554 121 ntBASIC1.25□□□□□ -2.21
PNKPQ96T60 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
PNKPQ96T60 SNORD114-22-201ENST00000365423 72 ntBASIC1.24□□□□□ -2.21
PNKPQ96T60 Y_RNA.588-201ENST00000391254 102 ntBASIC1.24□□□□□ -2.21
PNKPQ96T60 Y_RNA.659-201ENST00000515994 113 ntBASIC1.24□□□□□ -2.21
PNKPQ96T60 SCARNA23-201ENST00000516060 130 ntBASIC1.24□□□□□ -2.21
PNKPQ96T60 RNU6-795P-201ENST00000516323 103 ntBASIC1.24□□□□□ -2.21
PNKPQ96T60 RNU6-403P-201ENST00000363163 104 ntBASIC1.23□□□□□ -2.21
PNKPQ96T60 Y_RNA.544-201ENST00000384650 113 ntBASIC1.23□□□□□ -2.21
PNKPQ96T60 SNORD12-201ENST00000391002 90 ntBASIC1.23□□□□□ -2.21
PNKPQ96T60 MIR1257-201ENST00000408490 117 ntBASIC1.23□□□□□ -2.21
PNKPQ96T60 RNU6-994P-201ENST00000410507 111 ntBASIC1.23□□□□□ -2.21
PNKPQ96T60 RPS26P5-201ENST00000418544 335 ntBASIC1.23□□□□□ -2.21
PNKPQ96T60 Y_RNA.677-201ENST00000516401 85 ntBASIC1.23□□□□□ -2.21
PNKPQ96T60 SNORA25.16-201ENST00000516741 121 ntBASIC1.23□□□□□ -2.21
PNKPQ96T60 MIR548Z-201ENST00000584743 97 ntBASIC1.23□□□□□ -2.21
PNKPQ96T60 AC012531.4-201ENST00000616509 177 ntBASIC1.23□□□□□ -2.21
PNKPQ96T60 Y_RNA.818-201ENST00000618813 71 ntBASIC1.23□□□□□ -2.21
PNKPQ96T60 AC027335.2-201ENST00000624030 375 ntBASIC1.23□□□□□ -2.21
PNKPQ96T60 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
PNKPQ96T60 MIR96-201ENST00000362288 78 ntBASIC1.22□□□□□ -2.21
PNKPQ96T60 Y_RNA.10-201ENST00000362371 110 ntBASIC1.22□□□□□ -2.21
PNKPQ96T60 Y_RNA.119-201ENST00000363301 96 ntBASIC1.22□□□□□ -2.21
PNKPQ96T60 SNORD38.1-201ENST00000363863 68 ntBASIC1.22□□□□□ -2.21
PNKPQ96T60 Y_RNA.348-201ENST00000365403 103 ntBASIC1.22□□□□□ -2.21
PNKPQ96T60 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
PNKPQ96T60 RNU4-83P-201ENST00000410863 133 ntBASIC1.22□□□□□ -2.21
PNKPQ96T60 MIR4500-201ENST00000579472 76 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 303.9 ms