Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RNU6-922P-201ENST00000516753 99 ntBASIC1.76□□□□□ -2.13
CDK5RAP1Q96SZ6 AC133485.1-201ENST00000567176 124 ntBASIC1.76□□□□□ -2.13
CDK5RAP1Q96SZ6 MIR4500-201ENST00000579472 76 ntBASIC1.76□□□□□ -2.13
CDK5RAP1Q96SZ6 AP000942.3-201ENST00000603702 160 ntBASIC1.76□□□□□ -2.13
CDK5RAP1Q96SZ6 Y_RNA.57-201ENST00000362806 113 ntBASIC1.75□□□□□ -2.13
CDK5RAP1Q96SZ6 SNORD41-201ENST00000386967 70 ntBASIC1.75□□□□□ -2.13
CDK5RAP1Q96SZ6 SNORD4B-201ENST00000459083 72 ntBASIC1.75□□□□□ -2.13
CDK5RAP1Q96SZ6 AC004223.1-201ENST00000479840 271 ntBASIC1.75□□□□□ -2.13
CDK5RAP1Q96SZ6 AC103810.8-201ENST00000607347 118 ntBASIC1.75□□□□□ -2.13
CDK5RAP1Q96SZ6 AL096861.1-201ENST00000610899 123 ntBASIC1.75□□□□□ -2.13
CDK5RAP1Q96SZ6 MIR8081-201ENST00000611533 95 ntBASIC1.75□□□□□ -2.13
CDK5RAP1Q96SZ6 MIR6740-201ENST00000618268 113 ntBASIC1.75□□□□□ -2.13
CDK5RAP1Q96SZ6 U6.109-201ENST00000636749 87 ntBASIC1.75□□□□□ -2.13
CDK5RAP1Q96SZ6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CDK5RAP1Q96SZ6 HSBP1P2-201ENST00000299671 229 ntBASIC1.74□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU1-17P-201ENST00000363022 152 ntBASIC1.74□□□□□ -2.13
CDK5RAP1Q96SZ6 Y_RNA.168-201ENST00000363740 102 ntBASIC1.74□□□□□ -2.13
CDK5RAP1Q96SZ6 RNA5SP259-201ENST00000365541 109 ntBASIC1.74□□□□□ -2.13
CDK5RAP1Q96SZ6 AC004965.1-201ENST00000413033 213 ntBASIC1.74□□□□□ -2.13
CDK5RAP1Q96SZ6 AC073261.1-201ENST00000429409 121 ntBASIC1.74□□□□□ -2.13
CDK5RAP1Q96SZ6 SNORA25.13-201ENST00000516395 103 ntBASIC1.74□□□□□ -2.13
CDK5RAP1Q96SZ6 SNORD111.1-201ENST00000516421 86 ntBASIC1.74□□□□□ -2.13
CDK5RAP1Q96SZ6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.74□□□□□ -2.13
CDK5RAP1Q96SZ6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU6-949P-201ENST00000384040 107 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 SNORD38.2-201ENST00000384470 69 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 MIR588-201ENST00000384900 83 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU6-205P-201ENST00000390858 107 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU6-447P-201ENST00000410293 104 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU6-1118P-201ENST00000410382 104 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU6-1076P-201ENST00000410397 104 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU6-355P-201ENST00000410427 104 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU6-791P-201ENST00000410467 104 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU6-705P-201ENST00000410601 104 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU6-1100P-201ENST00000410691 104 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU6-860P-201ENST00000410860 104 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU6-1217P-201ENST00000411276 104 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU6-785P-201ENST00000411324 104 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 snoU13.11-201ENST00000459219 104 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU6-850P-201ENST00000516934 103 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 U6.90-201ENST00000614007 104 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 U6.70-201ENST00000620287 104 ntBASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
CDK5RAP1Q96SZ6 RNU6-480P-201ENST00000384332 107 ntBASIC1.72□□□□□ -2.13
CDK5RAP1Q96SZ6 MIR653-201ENST00000385279 96 ntBASIC1.72□□□□□ -2.13
CDK5RAP1Q96SZ6 RNA5SP292-201ENST00000390974 118 ntBASIC1.72□□□□□ -2.13
CDK5RAP1Q96SZ6 RNA5SP95-201ENST00000410319 137 ntBASIC1.72□□□□□ -2.13
CDK5RAP1Q96SZ6 snoU13.2-201ENST00000459201 104 ntBASIC1.72□□□□□ -2.13
CDK5RAP1Q96SZ6 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.72□□□□□ -2.13
CDK5RAP1Q96SZ6 SNORD115-37-201ENST00000363768 82 ntBASIC1.71□□□□□ -2.14
CDK5RAP1Q96SZ6 RNA5SP99-201ENST00000364020 114 ntBASIC1.71□□□□□ -2.14
CDK5RAP1Q96SZ6 RNY1P2-201ENST00000364820 117 ntBASIC1.71□□□□□ -2.14
CDK5RAP1Q96SZ6 MIR513A1-201ENST00000385138 129 ntBASIC1.71□□□□□ -2.14
CDK5RAP1Q96SZ6 RNU6-360P-201ENST00000390944 104 ntBASIC1.71□□□□□ -2.14
CDK5RAP1Q96SZ6 SNRPGP12-201ENST00000449481 213 ntBASIC1.71□□□□□ -2.14
CDK5RAP1Q96SZ6 SNORD13-201ENST00000459299 104 ntBASIC1.71□□□□□ -2.14
CDK5RAP1Q96SZ6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.71□□□□□ -2.14
CDK5RAP1Q96SZ6 MIR4285-201ENST00000581001 85 ntBASIC1.71□□□□□ -2.14
CDK5RAP1Q96SZ6 AC145423.2-201ENST00000610631 239 ntBASIC1.71□□□□□ -2.14
CDK5RAP1Q96SZ6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CDK5RAP1Q96SZ6 RNU6-1123P-201ENST00000362347 106 ntBASIC1.7□□□□□ -2.14
CDK5RAP1Q96SZ6 RNA5SP432-201ENST00000362480 116 ntBASIC1.7□□□□□ -2.14
CDK5RAP1Q96SZ6 Y_RNA.119-201ENST00000363301 96 ntBASIC1.7□□□□□ -2.14
CDK5RAP1Q96SZ6 AL161935.2-201ENST00000414627 60 ntBASIC1.7□□□□□ -2.14
CDK5RAP1Q96SZ6 SCARNA18B-201ENST00000458806 135 ntBASIC1.7□□□□□ -2.14
CDK5RAP1Q96SZ6 SNORD53B-201ENST00000577887 78 ntBASIC1.7□□□□□ -2.14
CDK5RAP1Q96SZ6 MIR8066-201ENST00000617280 78 ntBASIC1.7□□□□□ -2.14
CDK5RAP1Q96SZ6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.7□□□□□ -2.14
CDK5RAP1Q96SZ6 MIR30D-201ENST00000362283 70 ntBASIC1.69□□□□□ -2.14
CDK5RAP1Q96SZ6 SNORD48-201ENST00000364953 64 ntBASIC1.69□□□□□ -2.14
CDK5RAP1Q96SZ6 Y_RNA.508-201ENST00000384502 114 ntBASIC1.69□□□□□ -2.14
CDK5RAP1Q96SZ6 MIR516A2-201ENST00000384888 90 ntBASIC1.69□□□□□ -2.14
CDK5RAP1Q96SZ6 MIR516A1-201ENST00000385033 90 ntBASIC1.69□□□□□ -2.14
CDK5RAP1Q96SZ6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.69□□□□□ -2.14
CDK5RAP1Q96SZ6 RNU6-129P-201ENST00000391022 107 ntBASIC1.69□□□□□ -2.14
CDK5RAP1Q96SZ6 SNORD90-201ENST00000391145 111 ntBASIC1.69□□□□□ -2.14
CDK5RAP1Q96SZ6 AC245517.4-201ENST00000448601 281 ntBASIC1.69□□□□□ -2.14
CDK5RAP1Q96SZ6 RNU6-654P-201ENST00000364373 107 ntBASIC1.68□□□□□ -2.14
CDK5RAP1Q96SZ6 RNU6-132P-201ENST00000383863 107 ntBASIC1.68□□□□□ -2.14
CDK5RAP1Q96SZ6 MIR563-201ENST00000385080 79 ntBASIC1.68□□□□□ -2.14
CDK5RAP1Q96SZ6 MIR30A-201ENST00000385092 71 ntBASIC1.68□□□□□ -2.14
CDK5RAP1Q96SZ6 MIR1236-201ENST00000408340 102 ntBASIC1.68□□□□□ -2.14
CDK5RAP1Q96SZ6 RNU6-947P-201ENST00000516264 106 ntBASIC1.68□□□□□ -2.14
CDK5RAP1Q96SZ6 RNU6-523P-201ENST00000516304 54 ntBASIC1.68□□□□□ -2.14
CDK5RAP1Q96SZ6 RNU6-1108P-201ENST00000516308 104 ntBASIC1.68□□□□□ -2.14
CDK5RAP1Q96SZ6 RNU6-161P-201ENST00000363051 106 ntBASIC1.67□□□□□ -2.14
CDK5RAP1Q96SZ6 Y_RNA.532-201ENST00000384590 113 ntBASIC1.67□□□□□ -2.14
CDK5RAP1Q96SZ6 RNA5SP458-201ENST00000516188 119 ntBASIC1.67□□□□□ -2.14
CDK5RAP1Q96SZ6 SNORA25.16-201ENST00000516741 121 ntBASIC1.67□□□□□ -2.14
CDK5RAP1Q96SZ6 MIR3134-201ENST00000579433 74 ntBASIC1.67□□□□□ -2.14
CDK5RAP1Q96SZ6 AP000753.3-201ENST00000604083 169 ntBASIC1.67□□□□□ -2.14
CDK5RAP1Q96SZ6 RNA5SP363-201ENST00000365072 115 ntBASIC1.66□□□□□ -2.14
CDK5RAP1Q96SZ6 MIR517C-201ENST00000385103 95 ntBASIC1.66□□□□□ -2.14
CDK5RAP1Q96SZ6 RNU6-1165P-201ENST00000410119 107 ntBASIC1.66□□□□□ -2.14
CDK5RAP1Q96SZ6 RNU7-106P-201ENST00000459514 67 ntBASIC1.66□□□□□ -2.14
CDK5RAP1Q96SZ6 RNU6-75P-201ENST00000515944 104 ntBASIC1.66□□□□□ -2.14
CDK5RAP1Q96SZ6 RNU6-322P-201ENST00000516010 103 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms