Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 RNU6-497P-201ENST00000365316 104 ntBASIC1.67□□□□□ -2.14
ZSWIM3Q96MP5 SNORD38.2-201ENST00000384470 69 ntBASIC1.67□□□□□ -2.14
ZSWIM3Q96MP5 MT-TF-201ENST00000387314 71 ntBASIC1.67□□□□□ -2.14
ZSWIM3Q96MP5 MIR1287-201ENST00000408492 90 ntBASIC1.67□□□□□ -2.14
ZSWIM3Q96MP5 AC133485.1-201ENST00000567176 124 ntBASIC1.67□□□□□ -2.14
ZSWIM3Q96MP5 SNORA4-201ENST00000584302 138 ntBASIC1.67□□□□□ -2.14
ZSWIM3Q96MP5 RNU6-90P-201ENST00000606352 106 ntBASIC1.67□□□□□ -2.14
ZSWIM3Q96MP5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 MIR494-201ENST00000349529 81 ntBASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 MIR103A2-201ENST00000362154 78 ntBASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 Y_RNA.190-201ENST00000363964 101 ntBASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 Y_RNA.567-201ENST00000384736 106 ntBASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 RNU6-1165P-201ENST00000410119 107 ntBASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 RNU6-592P-201ENST00000411333 103 ntBASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 RNU7-62P-201ENST00000458856 62 ntBASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 AC079140.2-201ENST00000506193 142 ntBASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 AC008834.1-201ENST00000511612 175 ntBASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 AC138749.4-201ENST00000563970 127 ntBASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 SNORD53B-201ENST00000577887 78 ntBASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 RNU6-86P-201ENST00000606534 107 ntBASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 uc_338.6-201ENST00000613544 171 ntBASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 MIR8070-201ENST00000616510 88 ntBASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
ZSWIM3Q96MP5 RNA5SP173-201ENST00000364857 136 ntBASIC1.65□□□□□ -2.15
ZSWIM3Q96MP5 MIR3664-201ENST00000579074 99 ntBASIC1.65□□□□□ -2.15
ZSWIM3Q96MP5 BX248123.2-201ENST00000606318 124 ntBASIC1.65□□□□□ -2.15
ZSWIM3Q96MP5 AC012676.2-201ENST00000619258 186 ntBASIC1.65□□□□□ -2.15
ZSWIM3Q96MP5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
ZSWIM3Q96MP5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.65□□□□□ -2.15
ZSWIM3Q96MP5 SNORD116-22-201ENST00000384430 92 ntBASIC1.64□□□□□ -2.15
ZSWIM3Q96MP5 SNORA2B-201ENST00000384583 137 ntBASIC1.64□□□□□ -2.15
ZSWIM3Q96MP5 RNU6-205P-201ENST00000390858 107 ntBASIC1.64□□□□□ -2.15
ZSWIM3Q96MP5 MIR1323-201ENST00000408090 73 ntBASIC1.64□□□□□ -2.15
ZSWIM3Q96MP5 SNRPGP12-201ENST00000449481 213 ntBASIC1.64□□□□□ -2.15
ZSWIM3Q96MP5 AC019176.1-201ENST00000518519 225 ntBASIC1.64□□□□□ -2.15
ZSWIM3Q96MP5 AL512310.8-201ENST00000550183 120 ntBASIC1.64□□□□□ -2.15
ZSWIM3Q96MP5 MIR4285-201ENST00000581001 85 ntBASIC1.64□□□□□ -2.15
ZSWIM3Q96MP5 AC020891.4-201ENST00000605745 93 ntBASIC1.64□□□□□ -2.15
ZSWIM3Q96MP5 MIR337-201ENST00000362281 93 ntBASIC1.63□□□□□ -2.15
ZSWIM3Q96MP5 RNA5SP133-201ENST00000363368 119 ntBASIC1.63□□□□□ -2.15
ZSWIM3Q96MP5 RNU6-654P-201ENST00000364373 107 ntBASIC1.63□□□□□ -2.15
ZSWIM3Q96MP5 RNU6-1065P-201ENST00000384513 106 ntBASIC1.63□□□□□ -2.15
ZSWIM3Q96MP5 Y_RNA.620-201ENST00000411009 88 ntBASIC1.63□□□□□ -2.15
ZSWIM3Q96MP5 AC245517.4-201ENST00000448601 281 ntBASIC1.63□□□□□ -2.15
ZSWIM3Q96MP5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.63□□□□□ -2.15
ZSWIM3Q96MP5 RNU6-947P-201ENST00000516264 106 ntBASIC1.63□□□□□ -2.15
ZSWIM3Q96MP5 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.63□□□□□ -2.15
ZSWIM3Q96MP5 RNU6-1275P-201ENST00000391087 107 ntBASIC1.62□□□□□ -2.15
ZSWIM3Q96MP5 SNORA67.6-201ENST00000391093 99 ntBASIC1.62□□□□□ -2.15
ZSWIM3Q96MP5 RNU6-402P-201ENST00000410678 103 ntBASIC1.62□□□□□ -2.15
ZSWIM3Q96MP5 RNU6-1054P-201ENST00000411293 104 ntBASIC1.62□□□□□ -2.15
ZSWIM3Q96MP5 RPS27P16-201ENST00000425758 201 ntBASIC1.62□□□□□ -2.15
ZSWIM3Q96MP5 SPINT5P-201ENST00000448174 155 ntBASIC1.62□□□□□ -2.15
ZSWIM3Q96MP5 AP003327.1-201ENST00000529684 127 ntBASIC1.62□□□□□ -2.15
ZSWIM3Q96MP5 MIR4668-201ENST00000582284 70 ntBASIC1.62□□□□□ -2.15
ZSWIM3Q96MP5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.62□□□□□ -2.15
ZSWIM3Q96MP5 Y_RNA.219-201ENST00000364232 113 ntBASIC1.61□□□□□ -2.15
ZSWIM3Q96MP5 MIR934-201ENST00000401241 83 ntBASIC1.61□□□□□ -2.15
ZSWIM3Q96MP5 MIR3937-201ENST00000580135 106 ntBASIC1.61□□□□□ -2.15
ZSWIM3Q96MP5 AC090897.1-201ENST00000580909 226 ntBASIC1.61□□□□□ -2.15
ZSWIM3Q96MP5 MIR1245B-201ENST00000636115 69 ntBASIC1.61□□□□□ -2.15
ZSWIM3Q96MP5 RNY1P1-201ENST00000364372 112 ntBASIC1.6□□□□□ -2.15
ZSWIM3Q96MP5 Y_RNA.327-201ENST00000365201 102 ntBASIC1.6□□□□□ -2.15
ZSWIM3Q96MP5 RNU6-571P-201ENST00000384128 107 ntBASIC1.6□□□□□ -2.15
ZSWIM3Q96MP5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
ZSWIM3Q96MP5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.6□□□□□ -2.15
ZSWIM3Q96MP5 AC022137.1-201ENST00000483735 151 ntBASIC1.6□□□□□ -2.15
ZSWIM3Q96MP5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.6□□□□□ -2.15
ZSWIM3Q96MP5 AL513043.2-201ENST00000573941 143 ntBASIC1.6□□□□□ -2.15
ZSWIM3Q96MP5 U6.109-201ENST00000636749 87 ntBASIC1.6□□□□□ -2.15
ZSWIM3Q96MP5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.6□□□□□ -2.15
ZSWIM3Q96MP5 MIR18B-201ENST00000454574 71 ntBASIC1.59□□□□□ -2.15
ZSWIM3Q96MP5 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
ZSWIM3Q96MP5 RNU6-267P-201ENST00000516714 103 ntBASIC1.59□□□□□ -2.15
ZSWIM3Q96MP5 MTND5P40-201ENST00000559945 246 ntBASIC1.59□□□□□ -2.15
ZSWIM3Q96MP5 MIR4422-201ENST00000581938 83 ntBASIC1.59□□□□□ -2.15
ZSWIM3Q96MP5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.59□□□□□ -2.15
ZSWIM3Q96MP5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.59□□□□□ -2.16
ZSWIM3Q96MP5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
ZSWIM3Q96MP5 Y_RNA.73-201ENST00000362910 113 ntBASIC1.58□□□□□ -2.16
ZSWIM3Q96MP5 RNU6-1125P-201ENST00000363601 107 ntBASIC1.58□□□□□ -2.16
ZSWIM3Q96MP5 SNORA7.1-201ENST00000363750 139 ntBASIC1.58□□□□□ -2.16
ZSWIM3Q96MP5 RNU6-979P-201ENST00000383896 107 ntBASIC1.58□□□□□ -2.16
ZSWIM3Q96MP5 RNU6-573P-201ENST00000383938 106 ntBASIC1.58□□□□□ -2.16
ZSWIM3Q96MP5 RNU6-480P-201ENST00000384332 107 ntBASIC1.58□□□□□ -2.16
ZSWIM3Q96MP5 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
ZSWIM3Q96MP5 MIR499A-201ENST00000384903 122 ntBASIC1.58□□□□□ -2.16
ZSWIM3Q96MP5 MIR181B2-201ENST00000385004 89 ntBASIC1.58□□□□□ -2.16
ZSWIM3Q96MP5 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
ZSWIM3Q96MP5 RNU1-78P-201ENST00000391248 165 ntBASIC1.58□□□□□ -2.16
ZSWIM3Q96MP5 RNA5SP95-201ENST00000410319 137 ntBASIC1.58□□□□□ -2.16
ZSWIM3Q96MP5 RNA5SP363-201ENST00000365072 115 ntBASIC1.57□□□□□ -2.16
ZSWIM3Q96MP5 Y_RNA.588-201ENST00000391254 102 ntBASIC1.57□□□□□ -2.16
ZSWIM3Q96MP5 MIR5588-201ENST00000581890 63 ntBASIC1.57□□□□□ -2.16
ZSWIM3Q96MP5 IGLL4P-201ENST00000614590 133 ntBASIC1.57□□□□□ -2.16
ZSWIM3Q96MP5 AC025521.1-201ENST00000621624 286 ntBASIC1.57□□□□□ -2.16
ZSWIM3Q96MP5 ZNF209P-201ENST00000593450 2304 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms