Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 MIR147A-201ENST00000385079 72 ntBASIC-1.93□□□□□ -2.72
CCDC42Q96M95 MIR616-201ENST00000385293 97 ntBASIC-1.93□□□□□ -2.72
CCDC42Q96M95 SCARNA18B-201ENST00000458806 135 ntBASIC-1.93□□□□□ -2.72
CCDC42Q96M95 MIR376A1-201ENST00000616574 68 ntBASIC-1.93□□□□□ -2.72
CCDC42Q96M95 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.94□□□□□ -2.72
CCDC42Q96M95 RNU6-476P-201ENST00000384726 107 ntBASIC-1.94□□□□□ -2.72
CCDC42Q96M95 SNORD64-201ENST00000386683 67 ntBASIC-1.94□□□□□ -2.72
CCDC42Q96M95 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.94□□□□□ -2.72
CCDC42Q96M95 AC025253.1-201ENST00000613623 543 ntBASIC-1.94□□□□□ -2.72
CCDC42Q96M95 AC022079.1-201ENST00000621546 602 ntBASIC-1.94□□□□□ -2.72
CCDC42Q96M95 SNORA25.1-201ENST00000362326 128 ntBASIC-1.95□□□□□ -2.72
CCDC42Q96M95 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.95□□□□□ -2.72
CCDC42Q96M95 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.95□□□□□ -2.72
CCDC42Q96M95 RNU6-431P-201ENST00000383874 107 ntBASIC-1.95□□□□□ -2.72
CCDC42Q96M95 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.95□□□□□ -2.72
CCDC42Q96M95 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.95□□□□□ -2.72
CCDC42Q96M95 MIR624-201ENST00000385217 97 ntBASIC-1.95□□□□□ -2.72
CCDC42Q96M95 RNU6-453P-201ENST00000516819 85 ntBASIC-1.95□□□□□ -2.72
CCDC42Q96M95 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.95□□□□□ -2.72
CCDC42Q96M95 AL606534.2-204ENST00000635008 178 ntBASIC-1.95□□□□□ -2.72
CCDC42Q96M95 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.96□□□□□ -2.72
CCDC42Q96M95 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.96□□□□□ -2.72
CCDC42Q96M95 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.96□□□□□ -2.72
CCDC42Q96M95 MIR4306-201ENST00000583390 91 ntBASIC-1.96□□□□□ -2.72
CCDC42Q96M95 RNU6-326P-201ENST00000365480 107 ntBASIC-1.97□□□□□ -2.72
CCDC42Q96M95 RNU6-472P-201ENST00000384299 107 ntBASIC-1.97□□□□□ -2.72
CCDC42Q96M95 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.97□□□□□ -2.72
CCDC42Q96M95 MIR516A2-201ENST00000384888 90 ntBASIC-1.97□□□□□ -2.72
CCDC42Q96M95 MIR516A1-201ENST00000385033 90 ntBASIC-1.97□□□□□ -2.72
CCDC42Q96M95 SNORD115-46-201ENST00000390982 71 ntBASIC-1.97□□□□□ -2.72
CCDC42Q96M95 RNU6-850P-201ENST00000516934 103 ntBASIC-1.97□□□□□ -2.72
CCDC42Q96M95 MIR8068-201ENST00000618032 68 ntBASIC-1.97□□□□□ -2.72
CCDC42Q96M95 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.98□□□□□ -2.73
CCDC42Q96M95 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.98□□□□□ -2.73
CCDC42Q96M95 RNU6-211P-201ENST00000384047 107 ntBASIC-1.98□□□□□ -2.73
CCDC42Q96M95 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.98□□□□□ -2.73
CCDC42Q96M95 RNU4-69P-201ENST00000410677 143 ntBASIC-1.98□□□□□ -2.73
CCDC42Q96M95 SNORD116-25-201ENST00000516517 92 ntBASIC-1.98□□□□□ -2.73
CCDC42Q96M95 AC037487.3-201ENST00000606668 112 ntBASIC-1.98□□□□□ -2.73
CCDC42Q96M95 SNORD58B-201ENST00000607313 66 ntBASIC-1.98□□□□□ -2.73
CCDC42Q96M95 RNU6-978P-201ENST00000364371 103 ntBASIC-1.99□□□□□ -2.73
CCDC42Q96M95 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.99□□□□□ -2.73
CCDC42Q96M95 RNU6-290P-201ENST00000365212 101 ntBASIC-1.99□□□□□ -2.73
CCDC42Q96M95 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.99□□□□□ -2.73
CCDC42Q96M95 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.99□□□□□ -2.73
CCDC42Q96M95 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.99□□□□□ -2.73
CCDC42Q96M95 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.99□□□□□ -2.73
CCDC42Q96M95 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.99□□□□□ -2.73
CCDC42Q96M95 RNU4-43P-201ENST00000410628 137 ntBASIC-1.99□□□□□ -2.73
CCDC42Q96M95 RNA5SP67-201ENST00000516422 131 ntBASIC-1.99□□□□□ -2.73
CCDC42Q96M95 RNU2-35P-201ENST00000516446 142 ntBASIC-1.99□□□□□ -2.73
CCDC42Q96M95 MIR3115-201ENST00000577915 68 ntBASIC-1.99□□□□□ -2.73
CCDC42Q96M95 RNU2-4P-201ENST00000606190 192 ntBASIC-1.99□□□□□ -2.73
CCDC42Q96M95 MIR382-201ENST00000637119 76 ntBASIC-1.99□□□□□ -2.73
CCDC42Q96M95 Y_RNA.207-201ENST00000364142 106 ntBASIC-2□□□□□ -2.73
CCDC42Q96M95 RNU1-115P-201ENST00000365329 160 ntBASIC-2□□□□□ -2.73
CCDC42Q96M95 RNU6-728P-201ENST00000365375 104 ntBASIC-2□□□□□ -2.73
CCDC42Q96M95 Y_RNA.437-201ENST00000384113 113 ntBASIC-2□□□□□ -2.73
CCDC42Q96M95 Y_RNA.445-201ENST00000384168 102 ntBASIC-2□□□□□ -2.73
CCDC42Q96M95 MTND1P29-201ENST00000448112 647 ntBASIC-2□□□□□ -2.73
CCDC42Q96M95 RNU6-561P-201ENST00000516222 102 ntBASIC-2□□□□□ -2.73
CCDC42Q96M95 RNA5SP476-201ENST00000516613 103 ntBASIC-2□□□□□ -2.73
CCDC42Q96M95 U4.5-201ENST00000617137 123 ntBASIC-2□□□□□ -2.73
CCDC42Q96M95 TRDV1-202ENST00000621643 102 ntBASIC-2□□□□□ -2.73
CCDC42Q96M95 Y_RNA.28-201ENST00000362554 111 ntBASIC-2.01□□□□□ -2.73
CCDC42Q96M95 Y_RNA.283-201ENST00000364798 112 ntBASIC-2.01□□□□□ -2.73
CCDC42Q96M95 SNORD81.2-201ENST00000365153 76 ntBASIC-2.01□□□□□ -2.73
CCDC42Q96M95 Y_RNA.571-201ENST00000384753 98 ntBASIC-2.01□□□□□ -2.73
CCDC42Q96M95 MIR216B-201ENST00000390186 82 ntBASIC-2.01□□□□□ -2.73
CCDC42Q96M95 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-2.01□□□□□ -2.73
CCDC42Q96M95 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-2.01□□□□□ -2.73
CCDC42Q96M95 SERF1AP1-201ENST00000514575 187 ntBASIC-2.01□□□□□ -2.73
CCDC42Q96M95 RNU7-2P-201ENST00000516096 62 ntBASIC-2.01□□□□□ -2.73
CCDC42Q96M95 Y_RNA.688-201ENST00000516565 95 ntBASIC-2.01□□□□□ -2.73
CCDC42Q96M95 IGHVII-40-1-201ENST00000517316 58 ntBASIC-2.01□□□□□ -2.73
CCDC42Q96M95 RNY1P9-201ENST00000532431 109 ntBASIC-2.01□□□□□ -2.73
CCDC42Q96M95 AC103591.3-201ENST00000608684 209 ntBASIC-2.01□□□□□ -2.73
CCDC42Q96M95 MIR376B-201ENST00000614515 100 ntBASIC-2.01□□□□□ -2.73
CCDC42Q96M95 UBE2WP1-201ENST00000362030 340 ntBASIC-2.02□□□□□ -2.73
CCDC42Q96M95 Y_RNA.166-201ENST00000363730 102 ntBASIC-2.02□□□□□ -2.73
CCDC42Q96M95 RNU6-559P-201ENST00000516151 98 ntBASIC-2.02□□□□□ -2.73
CCDC42Q96M95 AC087741.2-201ENST00000619415 172 ntBASIC-2.02□□□□□ -2.73
CCDC42Q96M95 RNU6-845P-201ENST00000362578 103 ntBASIC-2.03□□□□□ -2.73
CCDC42Q96M95 Y_RNA.514-201ENST00000384528 112 ntBASIC-2.03□□□□□ -2.73
CCDC42Q96M95 Y_RNA.541-201ENST00000384640 113 ntBASIC-2.03□□□□□ -2.73
CCDC42Q96M95 Y_RNA.601-201ENST00000410500 113 ntBASIC-2.03□□□□□ -2.73
CCDC42Q96M95 AL353813.1-201ENST00000440700 253 ntBASIC-2.03□□□□□ -2.73
CCDC42Q96M95 AC002553.4-201ENST00000616896 331 ntBASIC-2.03□□□□□ -2.73
CCDC42Q96M95 U6.100-201ENST00000636230 99 ntBASIC-2.03□□□□□ -2.73
CCDC42Q96M95 Y_RNA.389-201ENST00000383924 113 ntBASIC-2.04□□□□□ -2.74
CCDC42Q96M95 RNU6-905P-201ENST00000384434 107 ntBASIC-2.04□□□□□ -2.74
CCDC42Q96M95 SNORD77B-201ENST00000391112 67 ntBASIC-2.04□□□□□ -2.74
CCDC42Q96M95 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-2.04□□□□□ -2.74
CCDC42Q96M95 AC009779.6-201ENST00000603972 165 ntBASIC-2.04□□□□□ -2.74
CCDC42Q96M95 MIR548O2-201ENST00000616090 70 ntBASIC-2.04□□□□□ -2.74
CCDC42Q96M95 Y_RNA.80-201ENST00000362996 102 ntBASIC-2.05□□□□□ -2.74
CCDC42Q96M95 Y_RNA.183-201ENST00000363882 113 ntBASIC-2.05□□□□□ -2.74
CCDC42Q96M95 RNU6-690P-201ENST00000365242 106 ntBASIC-2.05□□□□□ -2.74
CCDC42Q96M95 Y_RNA.485-201ENST00000384395 102 ntBASIC-2.05□□□□□ -2.74
CCDC42Q96M95 MIR548E-201ENST00000408287 88 ntBASIC-2.05□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 346.3 ms