Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 MIR103A2-201ENST00000362154 78 ntBASIC2.17□□□□□ -2.06
IFT43Q96FT9 SNORD33-201ENST00000362761 85 ntBASIC2.17□□□□□ -2.06
IFT43Q96FT9 AC079140.2-201ENST00000506193 142 ntBASIC2.17□□□□□ -2.06
IFT43Q96FT9 uc_338.20-201ENST00000621563 178 ntBASIC2.17□□□□□ -2.06
IFT43Q96FT9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
IFT43Q96FT9 MIR377-201ENST00000362145 69 ntBASIC2.16□□□□□ -2.06
IFT43Q96FT9 Y_RNA.648-201ENST00000459455 110 ntBASIC2.16□□□□□ -2.06
IFT43Q96FT9 MIR4712-201ENST00000583750 82 ntBASIC2.16□□□□□ -2.06
IFT43Q96FT9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
IFT43Q96FT9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
IFT43Q96FT9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
IFT43Q96FT9 SNORA67.3-201ENST00000384366 140 ntBASIC2.15□□□□□ -2.07
IFT43Q96FT9 SNORA64-201ENST00000384674 134 ntBASIC2.15□□□□□ -2.07
IFT43Q96FT9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.15□□□□□ -2.07
IFT43Q96FT9 BX276092.1-201ENST00000427368 251 ntBASIC2.15□□□□□ -2.07
IFT43Q96FT9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.15□□□□□ -2.07
IFT43Q96FT9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
IFT43Q96FT9 RNU4-32P-201ENST00000363404 141 ntBASIC2.14□□□□□ -2.07
IFT43Q96FT9 RNU6-1065P-201ENST00000384513 106 ntBASIC2.14□□□□□ -2.07
IFT43Q96FT9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
IFT43Q96FT9 AC245517.4-201ENST00000448601 281 ntBASIC2.14□□□□□ -2.07
IFT43Q96FT9 AC019176.1-201ENST00000518519 225 ntBASIC2.14□□□□□ -2.07
IFT43Q96FT9 MIR1289-2-201ENST00000408360 111 ntBASIC2.13□□□□□ -2.07
IFT43Q96FT9 SNORA25.13-201ENST00000516395 103 ntBASIC2.13□□□□□ -2.07
IFT43Q96FT9 RNU7-153P-201ENST00000516455 62 ntBASIC2.13□□□□□ -2.07
IFT43Q96FT9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.13□□□□□ -2.07
IFT43Q96FT9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.13□□□□□ -2.07
IFT43Q96FT9 AL627230.6-201ENST00000611129 280 ntBASIC2.13□□□□□ -2.07
IFT43Q96FT9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
IFT43Q96FT9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
IFT43Q96FT9 AL359851.1-201ENST00000569460 4997 ntBASIC2.12□□□□□ -2.07
IFT43Q96FT9 RNU6-315P-201ENST00000362666 107 ntBASIC2.12□□□□□ -2.07
IFT43Q96FT9 RNU6-654P-201ENST00000364373 107 ntBASIC2.12□□□□□ -2.07
IFT43Q96FT9 RNU6-580P-201ENST00000365159 107 ntBASIC2.12□□□□□ -2.07
IFT43Q96FT9 SNORA72.6-201ENST00000384520 129 ntBASIC2.12□□□□□ -2.07
IFT43Q96FT9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
IFT43Q96FT9 RNU7-85P-201ENST00000458851 63 ntBASIC2.12□□□□□ -2.07
IFT43Q96FT9 RPL23AP42-201ENST00000471152 471 ntBASIC2.12□□□□□ -2.07
IFT43Q96FT9 AC015712.3-201ENST00000559380 164 ntBASIC2.12□□□□□ -2.07
IFT43Q96FT9 MIR3664-201ENST00000579074 99 ntBASIC2.12□□□□□ -2.07
IFT43Q96FT9 MIR3937-201ENST00000580135 106 ntBASIC2.12□□□□□ -2.07
IFT43Q96FT9 MIR4769-201ENST00000584126 77 ntBASIC2.12□□□□□ -2.07
IFT43Q96FT9 uc_338.6-201ENST00000613544 171 ntBASIC2.12□□□□□ -2.07
IFT43Q96FT9 RNU6-53P-201ENST00000365367 106 ntBASIC2.11□□□□□ -2.07
IFT43Q96FT9 AL591806.2-201ENST00000433122 173 ntBASIC2.11□□□□□ -2.07
IFT43Q96FT9 MIR18B-201ENST00000454574 71 ntBASIC2.11□□□□□ -2.07
IFT43Q96FT9 AC025033.1-201ENST00000463883 194 ntBASIC2.11□□□□□ -2.07
IFT43Q96FT9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
IFT43Q96FT9 RNU4-58P-201ENST00000363192 141 ntBASIC2.1□□□□□ -2.07
IFT43Q96FT9 RNA5SP160-201ENST00000364866 120 ntBASIC2.1□□□□□ -2.07
IFT43Q96FT9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
IFT43Q96FT9 RNU6-129P-201ENST00000391022 107 ntBASIC2.1□□□□□ -2.07
IFT43Q96FT9 RNU6-1254P-201ENST00000391266 104 ntBASIC2.1□□□□□ -2.07
IFT43Q96FT9 RNA5SP95-201ENST00000410319 137 ntBASIC2.1□□□□□ -2.07
IFT43Q96FT9 AC073261.1-201ENST00000429409 121 ntBASIC2.1□□□□□ -2.07
IFT43Q96FT9 RNU1-40P-201ENST00000516816 164 ntBASIC2.1□□□□□ -2.07
IFT43Q96FT9 RNU1-97P-201ENST00000516872 164 ntBASIC2.1□□□□□ -2.07
IFT43Q96FT9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.1□□□□□ -2.07
IFT43Q96FT9 AC012493.3-201ENST00000604494 112 ntBASIC2.1□□□□□ -2.07
IFT43Q96FT9 SNORD36A-201ENST00000362874 73 ntBASIC2.09□□□□□ -2.07
IFT43Q96FT9 Y_RNA.508-201ENST00000384502 114 ntBASIC2.09□□□□□ -2.07
IFT43Q96FT9 RNU6-482P-201ENST00000391068 107 ntBASIC2.09□□□□□ -2.07
IFT43Q96FT9 RNU6-243P-201ENST00000391140 107 ntBASIC2.09□□□□□ -2.07
IFT43Q96FT9 AL356379.1-201ENST00000414105 126 ntBASIC2.09□□□□□ -2.07
IFT43Q96FT9 RNA5SP233-201ENST00000459153 113 ntBASIC2.09□□□□□ -2.07
IFT43Q96FT9 AC023790.1-201ENST00000482174 347 ntBASIC2.09□□□□□ -2.07
IFT43Q96FT9 AC108210.2-201ENST00000503681 201 ntBASIC2.09□□□□□ -2.07
IFT43Q96FT9 MIR4491-201ENST00000581087 68 ntBASIC2.09□□□□□ -2.07
IFT43Q96FT9 RNU6-624P-201ENST00000363411 107 ntBASIC2.08□□□□□ -2.08
IFT43Q96FT9 MIR516A2-201ENST00000384888 90 ntBASIC2.08□□□□□ -2.08
IFT43Q96FT9 MIR516A1-201ENST00000385033 90 ntBASIC2.08□□□□□ -2.08
IFT43Q96FT9 SUMO2P12-201ENST00000405924 140 ntBASIC2.08□□□□□ -2.08
IFT43Q96FT9 SNORD93-201ENST00000408813 74 ntBASIC2.08□□□□□ -2.08
IFT43Q96FT9 snoU13.11-201ENST00000459219 104 ntBASIC2.08□□□□□ -2.08
IFT43Q96FT9 RNU6-165P-201ENST00000517170 99 ntBASIC2.08□□□□□ -2.08
IFT43Q96FT9 MIR4536-1-201ENST00000583537 88 ntBASIC2.08□□□□□ -2.08
IFT43Q96FT9 AL161722.3-201ENST00000605789 2983 ntBASIC2.07□□□□□ -2.08
IFT43Q96FT9 RNU6-65P-201ENST00000516332 98 ntBASIC2.07□□□□□ -2.08
IFT43Q96FT9 RNU6-531P-201ENST00000516694 104 ntBASIC2.07□□□□□ -2.08
IFT43Q96FT9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.07□□□□□ -2.08
IFT43Q96FT9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.06□□□□□ -2.08
IFT43Q96FT9 HMGN2P19-201ENST00000425149 265 ntBASIC2.06□□□□□ -2.08
IFT43Q96FT9 RNA5SP364-201ENST00000516938 78 ntBASIC2.06□□□□□ -2.08
IFT43Q96FT9 AL512310.8-201ENST00000550183 120 ntBASIC2.06□□□□□ -2.08
IFT43Q96FT9 MIR3198-2-201ENST00000577868 80 ntBASIC2.06□□□□□ -2.08
IFT43Q96FT9 Y_RNA.783-201ENST00000613546 102 ntBASIC2.06□□□□□ -2.08
IFT43Q96FT9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
IFT43Q96FT9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
IFT43Q96FT9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
IFT43Q96FT9 RNU1-36P-201ENST00000365130 165 ntBASIC2.05□□□□□ -2.08
IFT43Q96FT9 RNU6-811P-201ENST00000384069 107 ntBASIC2.05□□□□□ -2.08
IFT43Q96FT9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
IFT43Q96FT9 U8.13-201ENST00000390842 128 ntBASIC2.05□□□□□ -2.08
IFT43Q96FT9 Y_RNA.588-201ENST00000391254 102 ntBASIC2.05□□□□□ -2.08
IFT43Q96FT9 SNORA26.9-201ENST00000391322 122 ntBASIC2.05□□□□□ -2.08
IFT43Q96FT9 RNA5SP182-201ENST00000516064 82 ntBASIC2.05□□□□□ -2.08
IFT43Q96FT9 RNU6-1194P-201ENST00000516208 104 ntBASIC2.05□□□□□ -2.08
IFT43Q96FT9 SNORA25.16-201ENST00000516741 121 ntBASIC2.05□□□□□ -2.08
IFT43Q96FT9 MIR4796-201ENST00000580742 81 ntBASIC2.05□□□□□ -2.08
IFT43Q96FT9 AC145423.2-201ENST00000610631 239 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms