Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 MIR4714-201ENST00000580728 77 ntBASIC0.93□□□□□ -2.26
CHMP4CQ96CF2 AL359881.1-201ENST00000602916 267 ntBASIC0.93□□□□□ -2.26
CHMP4CQ96CF2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.93□□□□□ -2.26
CHMP4CQ96CF2 AC105081.1-201ENST00000617727 106 ntBASIC0.93□□□□□ -2.26
CHMP4CQ96CF2 AC096949.1-201ENST00000412047 152 ntBASIC0.92□□□□□ -2.26
CHMP4CQ96CF2 MIR1270-201ENST00000459320 83 ntBASIC0.92□□□□□ -2.26
CHMP4CQ96CF2 RNU6-971P-201ENST00000516920 106 ntBASIC0.92□□□□□ -2.26
CHMP4CQ96CF2 AP003327.1-201ENST00000529684 127 ntBASIC0.92□□□□□ -2.26
CHMP4CQ96CF2 MIR3612-201ENST00000579753 87 ntBASIC0.92□□□□□ -2.26
CHMP4CQ96CF2 U6.109-201ENST00000636749 87 ntBASIC0.92□□□□□ -2.26
CHMP4CQ96CF2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
CHMP4CQ96CF2 RNA5SP133-201ENST00000363368 119 ntBASIC0.91□□□□□ -2.26
CHMP4CQ96CF2 RNU4-45P-201ENST00000365469 141 ntBASIC0.91□□□□□ -2.26
CHMP4CQ96CF2 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
CHMP4CQ96CF2 AC004941.2-201ENST00000427009 228 ntBASIC0.91□□□□□ -2.26
CHMP4CQ96CF2 RNU6-765P-201ENST00000516916 99 ntBASIC0.91□□□□□ -2.26
CHMP4CQ96CF2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.91□□□□□ -2.26
CHMP4CQ96CF2 AC025166.1-201ENST00000612411 163 ntBASIC0.91□□□□□ -2.26
CHMP4CQ96CF2 RNU4-58P-201ENST00000363192 141 ntBASIC0.9□□□□□ -2.27
CHMP4CQ96CF2 RNU6-704P-201ENST00000364162 103 ntBASIC0.9□□□□□ -2.27
CHMP4CQ96CF2 SNORD58C-201ENST00000365223 64 ntBASIC0.9□□□□□ -2.27
CHMP4CQ96CF2 RNA5SP117-201ENST00000365294 118 ntBASIC0.9□□□□□ -2.27
CHMP4CQ96CF2 SNORA36.2-201ENST00000384004 127 ntBASIC0.9□□□□□ -2.27
CHMP4CQ96CF2 RNU6-187P-201ENST00000384139 106 ntBASIC0.9□□□□□ -2.27
CHMP4CQ96CF2 SNORA25.16-201ENST00000516741 121 ntBASIC0.9□□□□□ -2.27
CHMP4CQ96CF2 MIR5000-201ENST00000577717 103 ntBASIC0.9□□□□□ -2.27
CHMP4CQ96CF2 MIR508-201ENST00000384857 115 ntBASIC0.89□□□□□ -2.27
CHMP4CQ96CF2 AC002350.1-201ENST00000490759 375 ntBASIC0.89□□□□□ -2.27
CHMP4CQ96CF2 MIR6835-201ENST00000621552 64 ntBASIC0.89□□□□□ -2.27
CHMP4CQ96CF2 RNU6-616P-201ENST00000384353 107 ntBASIC0.88□□□□□ -2.27
CHMP4CQ96CF2 MIR598-201ENST00000384868 97 ntBASIC0.88□□□□□ -2.27
CHMP4CQ96CF2 MIR206-201ENST00000384872 86 ntBASIC0.88□□□□□ -2.27
CHMP4CQ96CF2 SNORD100-201ENST00000408573 76 ntBASIC0.88□□□□□ -2.27
CHMP4CQ96CF2 RNU6-772P-201ENST00000516042 105 ntBASIC0.88□□□□□ -2.27
CHMP4CQ96CF2 Y_RNA.697-201ENST00000516776 113 ntBASIC0.88□□□□□ -2.27
CHMP4CQ96CF2 Y_RNA.346-201ENST00000365385 112 ntBASIC0.87□□□□□ -2.27
CHMP4CQ96CF2 Y_RNA.448-201ENST00000384185 108 ntBASIC0.87□□□□□ -2.27
CHMP4CQ96CF2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.87□□□□□ -2.27
CHMP4CQ96CF2 RNU7-2P-201ENST00000516096 62 ntBASIC0.87□□□□□ -2.27
CHMP4CQ96CF2 RNU6-80P-201ENST00000384195 107 ntBASIC0.86□□□□□ -2.27
CHMP4CQ96CF2 MT-TI-201ENST00000387365 69 ntBASIC0.86□□□□□ -2.27
CHMP4CQ96CF2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
CHMP4CQ96CF2 RNU6-1321P-201ENST00000390905 107 ntBASIC0.86□□□□□ -2.27
CHMP4CQ96CF2 RNU6-1194P-201ENST00000516208 104 ntBASIC0.86□□□□□ -2.27
CHMP4CQ96CF2 RNU6-531P-201ENST00000516694 104 ntBASIC0.86□□□□□ -2.27
CHMP4CQ96CF2 AC138749.4-201ENST00000563970 127 ntBASIC0.86□□□□□ -2.27
CHMP4CQ96CF2 AC138907.6-201ENST00000568401 126 ntBASIC0.86□□□□□ -2.27
CHMP4CQ96CF2 AC087741.2-201ENST00000619415 172 ntBASIC0.86□□□□□ -2.27
CHMP4CQ96CF2 MTND5P18-201ENST00000445624 1801 ntBASIC0.85□□□□□ -2.27
CHMP4CQ96CF2 MIR101-2-201ENST00000362195 79 ntBASIC0.85□□□□□ -2.27
CHMP4CQ96CF2 MIR18A-201ENST00000362310 71 ntBASIC0.85□□□□□ -2.27
CHMP4CQ96CF2 RNU6-865P-201ENST00000364772 107 ntBASIC0.85□□□□□ -2.27
CHMP4CQ96CF2 RNY1P2-201ENST00000364820 117 ntBASIC0.85□□□□□ -2.27
CHMP4CQ96CF2 RNU7-48P-201ENST00000458875 63 ntBASIC0.85□□□□□ -2.27
CHMP4CQ96CF2 RNA5SP480-201ENST00000516840 109 ntBASIC0.85□□□□□ -2.27
CHMP4CQ96CF2 AL157777.2-201ENST00000258070 137 ntBASIC0.84□□□□□ -2.27
CHMP4CQ96CF2 SNORD115-19-201ENST00000363098 82 ntBASIC0.84□□□□□ -2.27
CHMP4CQ96CF2 Y_RNA.98-201ENST00000363109 102 ntBASIC0.84□□□□□ -2.27
CHMP4CQ96CF2 SNORD115-18-201ENST00000363293 82 ntBASIC0.84□□□□□ -2.27
CHMP4CQ96CF2 Y_RNA.119-201ENST00000363301 96 ntBASIC0.84□□□□□ -2.27
CHMP4CQ96CF2 SNORD114-26-201ENST00000363543 72 ntBASIC0.84□□□□□ -2.27
CHMP4CQ96CF2 SNORD115-17-201ENST00000364612 82 ntBASIC0.84□□□□□ -2.27
CHMP4CQ96CF2 MIRLET7F2-201ENST00000385277 83 ntBASIC0.84□□□□□ -2.27
CHMP4CQ96CF2 RNU6-469P-201ENST00000516253 101 ntBASIC0.84□□□□□ -2.27
CHMP4CQ96CF2 RNY4P6-201ENST00000363667 96 ntBASIC0.83□□□□□ -2.28
CHMP4CQ96CF2 Y_RNA.536-201ENST00000384621 113 ntBASIC0.83□□□□□ -2.28
CHMP4CQ96CF2 MIR140-201ENST00000385282 100 ntBASIC0.83□□□□□ -2.28
CHMP4CQ96CF2 RNU7-107P-201ENST00000459121 61 ntBASIC0.83□□□□□ -2.28
CHMP4CQ96CF2 PVT1_3.1-201ENST00000620853 95 ntBASIC0.83□□□□□ -2.28
CHMP4CQ96CF2 Y_RNA.174-201ENST00000363781 105 ntBASIC0.82□□□□□ -2.28
CHMP4CQ96CF2 SNORD115-35-201ENST00000365122 82 ntBASIC0.82□□□□□ -2.28
CHMP4CQ96CF2 RNU6-535P-201ENST00000384722 107 ntBASIC0.82□□□□□ -2.28
CHMP4CQ96CF2 MIR548D2-201ENST00000384955 97 ntBASIC0.82□□□□□ -2.28
CHMP4CQ96CF2 AL606490.4-201ENST00000423117 127 ntBASIC0.82□□□□□ -2.28
CHMP4CQ96CF2 TMSB4XP3-201ENST00000445144 114 ntBASIC0.82□□□□□ -2.28
CHMP4CQ96CF2 RNU6-1234P-201ENST00000516877 103 ntBASIC0.82□□□□□ -2.28
CHMP4CQ96CF2 MTND5P34-201ENST00000568888 325 ntBASIC0.82□□□□□ -2.28
CHMP4CQ96CF2 AL590095.2-201ENST00000604136 117 ntBASIC0.82□□□□□ -2.28
CHMP4CQ96CF2 AP001362.1-201ENST00000625165 124 ntBASIC0.82□□□□□ -2.28
CHMP4CQ96CF2 RNU6-735P-201ENST00000410612 107 ntBASIC0.81□□□□□ -2.28
CHMP4CQ96CF2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.81□□□□□ -2.28
CHMP4CQ96CF2 Y_RNA.328-201ENST00000365208 113 ntBASIC0.8□□□□□ -2.28
CHMP4CQ96CF2 RNU6-429P-201ENST00000384582 108 ntBASIC0.8□□□□□ -2.28
CHMP4CQ96CF2 MIR7-2-201ENST00000384970 110 ntBASIC0.8□□□□□ -2.28
CHMP4CQ96CF2 RNU6-733P-201ENST00000410759 104 ntBASIC0.8□□□□□ -2.28
CHMP4CQ96CF2 SUMO1P3-201ENST00000439961 304 ntBASIC0.8□□□□□ -2.28
CHMP4CQ96CF2 Y_RNA.71-201ENST00000362892 104 ntBASIC0.79□□□□□ -2.28
CHMP4CQ96CF2 RNY1P8-201ENST00000383970 114 ntBASIC0.79□□□□□ -2.28
CHMP4CQ96CF2 RNU6-291P-201ENST00000384720 107 ntBASIC0.79□□□□□ -2.28
CHMP4CQ96CF2 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.79□□□□□ -2.28
CHMP4CQ96CF2 Y_RNA.630-201ENST00000411370 108 ntBASIC0.79□□□□□ -2.28
CHMP4CQ96CF2 AC098934.3-201ENST00000430450 190 ntBASIC0.79□□□□□ -2.28
CHMP4CQ96CF2 Y_RNA.773-201ENST00000607168 90 ntBASIC0.79□□□□□ -2.28
CHMP4CQ96CF2 Y_RNA.218-201ENST00000364218 104 ntBASIC0.78□□□□□ -2.28
CHMP4CQ96CF2 RNU6-679P-201ENST00000391003 106 ntBASIC0.78□□□□□ -2.28
CHMP4CQ96CF2 RNU6-521P-201ENST00000516663 105 ntBASIC0.78□□□□□ -2.28
CHMP4CQ96CF2 MIR3678-201ENST00000578455 94 ntBASIC0.78□□□□□ -2.28
CHMP4CQ96CF2 MIR4500-201ENST00000579472 76 ntBASIC0.78□□□□□ -2.28
CHMP4CQ96CF2 Y_RNA.32-201ENST00000362589 110 ntBASIC0.77□□□□□ -2.29
CHMP4CQ96CF2 Y_RNA.36-201ENST00000362602 112 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 204.8 ms