Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 Y_RNA.620-201ENST00000411009 88 ntBASIC2.18□□□□□ -2.06
VTI1AQ96AJ9 RPL30P7-201ENST00000479312 323 ntBASIC2.18□□□□□ -2.06
VTI1AQ96AJ9 RNU11-2P-201ENST00000516898 142 ntBASIC2.18□□□□□ -2.06
VTI1AQ96AJ9 AP003327.1-201ENST00000529684 127 ntBASIC2.18□□□□□ -2.06
VTI1AQ96AJ9 MIR3937-201ENST00000580135 106 ntBASIC2.18□□□□□ -2.06
VTI1AQ96AJ9 MIR4781-201ENST00000585250 76 ntBASIC2.18□□□□□ -2.06
VTI1AQ96AJ9 MIR378A-201ENST00000362177 66 ntBASIC2.17□□□□□ -2.06
VTI1AQ96AJ9 AL513043.2-201ENST00000573941 143 ntBASIC2.17□□□□□ -2.06
VTI1AQ96AJ9 AC025521.1-201ENST00000621624 286 ntBASIC2.17□□□□□ -2.06
VTI1AQ96AJ9 AP000553.5-201ENST00000641933 54 ntBASIC2.17□□□□□ -2.06
VTI1AQ96AJ9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
VTI1AQ96AJ9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.16□□□□□ -2.06
VTI1AQ96AJ9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
VTI1AQ96AJ9 MIR377-201ENST00000362145 69 ntBASIC2.16□□□□□ -2.06
VTI1AQ96AJ9 RNU6-497P-201ENST00000365316 104 ntBASIC2.16□□□□□ -2.06
VTI1AQ96AJ9 RNU6-1275P-201ENST00000391087 107 ntBASIC2.16□□□□□ -2.06
VTI1AQ96AJ9 AL512310.8-201ENST00000550183 120 ntBASIC2.16□□□□□ -2.06
VTI1AQ96AJ9 MIR5089-201ENST00000580047 84 ntBASIC2.16□□□□□ -2.06
VTI1AQ96AJ9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
VTI1AQ96AJ9 RNA5SP133-201ENST00000363368 119 ntBASIC2.15□□□□□ -2.07
VTI1AQ96AJ9 Y_RNA.219-201ENST00000364232 113 ntBASIC2.15□□□□□ -2.07
VTI1AQ96AJ9 RNU6-580P-201ENST00000365159 107 ntBASIC2.15□□□□□ -2.07
VTI1AQ96AJ9 RNA5SP190-201ENST00000365222 118 ntBASIC2.15□□□□□ -2.07
VTI1AQ96AJ9 Y_RNA.609-201ENST00000410669 89 ntBASIC2.15□□□□□ -2.07
VTI1AQ96AJ9 AC003989.2-201ENST00000440224 169 ntBASIC2.15□□□□□ -2.07
VTI1AQ96AJ9 MIR4500-201ENST00000579472 76 ntBASIC2.15□□□□□ -2.07
VTI1AQ96AJ9 MIR8081-201ENST00000611533 95 ntBASIC2.15□□□□□ -2.07
VTI1AQ96AJ9 RNU6-1065P-201ENST00000384513 106 ntBASIC2.14□□□□□ -2.07
VTI1AQ96AJ9 MT-TF-201ENST00000387314 71 ntBASIC2.14□□□□□ -2.07
VTI1AQ96AJ9 SNORA17.3-201ENST00000391159 129 ntBASIC2.14□□□□□ -2.07
VTI1AQ96AJ9 RNU4-83P-201ENST00000410863 133 ntBASIC2.14□□□□□ -2.07
VTI1AQ96AJ9 SNRPGP12-201ENST00000449481 213 ntBASIC2.14□□□□□ -2.07
VTI1AQ96AJ9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.14□□□□□ -2.07
VTI1AQ96AJ9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
VTI1AQ96AJ9 Y_RNA.119-201ENST00000363301 96 ntBASIC2.13□□□□□ -2.07
VTI1AQ96AJ9 RNU6-979P-201ENST00000383896 107 ntBASIC2.13□□□□□ -2.07
VTI1AQ96AJ9 SNORD13-201ENST00000459299 104 ntBASIC2.13□□□□□ -2.07
VTI1AQ96AJ9 MIR5588-201ENST00000581890 63 ntBASIC2.13□□□□□ -2.07
VTI1AQ96AJ9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
VTI1AQ96AJ9 Y_RNA.191-201ENST00000363972 113 ntBASIC2.12□□□□□ -2.07
VTI1AQ96AJ9 Y_RNA.226-201ENST00000364337 114 ntBASIC2.12□□□□□ -2.07
VTI1AQ96AJ9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
VTI1AQ96AJ9 SNORD78.1-201ENST00000390866 65 ntBASIC2.12□□□□□ -2.07
VTI1AQ96AJ9 SUMO2P12-201ENST00000405924 140 ntBASIC2.12□□□□□ -2.07
VTI1AQ96AJ9 RPS27P16-201ENST00000425758 201 ntBASIC2.12□□□□□ -2.07
VTI1AQ96AJ9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.12□□□□□ -2.07
VTI1AQ96AJ9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.12□□□□□ -2.07
VTI1AQ96AJ9 RNU6-1125P-201ENST00000363601 107 ntBASIC2.11□□□□□ -2.07
VTI1AQ96AJ9 RNU6-1276P-201ENST00000365372 104 ntBASIC2.11□□□□□ -2.07
VTI1AQ96AJ9 RNU6-480P-201ENST00000384332 107 ntBASIC2.11□□□□□ -2.07
VTI1AQ96AJ9 RNA5SP338-201ENST00000410495 85 ntBASIC2.11□□□□□ -2.07
VTI1AQ96AJ9 BX276092.1-201ENST00000427368 251 ntBASIC2.11□□□□□ -2.07
VTI1AQ96AJ9 snoU13.21-201ENST00000459368 105 ntBASIC2.11□□□□□ -2.07
VTI1AQ96AJ9 MIR4285-201ENST00000581001 85 ntBASIC2.11□□□□□ -2.07
VTI1AQ96AJ9 snoU13.31-201ENST00000607291 104 ntBASIC2.11□□□□□ -2.07
VTI1AQ96AJ9 AC084768.2-201ENST00000622736 221 ntBASIC2.11□□□□□ -2.07
VTI1AQ96AJ9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
VTI1AQ96AJ9 AC008163.1-202ENST00000636004 2889 ntBASIC2.1□□□□□ -2.07
VTI1AQ96AJ9 MIR337-201ENST00000362281 93 ntBASIC2.1□□□□□ -2.07
VTI1AQ96AJ9 RNU6-228P-201ENST00000362700 106 ntBASIC2.1□□□□□ -2.07
VTI1AQ96AJ9 MIR1287-201ENST00000408492 90 ntBASIC2.1□□□□□ -2.07
VTI1AQ96AJ9 AC048334.1-201ENST00000477975 159 ntBASIC2.1□□□□□ -2.07
VTI1AQ96AJ9 RNU6-850P-201ENST00000516934 103 ntBASIC2.1□□□□□ -2.07
VTI1AQ96AJ9 AL161722.3-201ENST00000605789 2983 ntBASIC2.1□□□□□ -2.07
VTI1AQ96AJ9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.1□□□□□ -2.07
VTI1AQ96AJ9 RNU6-242P-201ENST00000384359 107 ntBASIC2.09□□□□□ -2.07
VTI1AQ96AJ9 Y_RNA.588-201ENST00000391254 102 ntBASIC2.09□□□□□ -2.07
VTI1AQ96AJ9 MIR4491-201ENST00000581087 68 ntBASIC2.09□□□□□ -2.07
VTI1AQ96AJ9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.08
VTI1AQ96AJ9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VTI1AQ96AJ9 RNU6-509P-201ENST00000363519 107 ntBASIC2.08□□□□□ -2.08
VTI1AQ96AJ9 RNU6-787P-201ENST00000384032 107 ntBASIC2.08□□□□□ -2.08
VTI1AQ96AJ9 RNU6-1124P-201ENST00000384169 107 ntBASIC2.08□□□□□ -2.08
VTI1AQ96AJ9 RNU6-1054P-201ENST00000411293 104 ntBASIC2.08□□□□□ -2.08
VTI1AQ96AJ9 SNORA25.16-201ENST00000516741 121 ntBASIC2.08□□□□□ -2.08
VTI1AQ96AJ9 RNU6-902P-201ENST00000517212 91 ntBASIC2.08□□□□□ -2.08
VTI1AQ96AJ9 RNU6-633P-201ENST00000362612 103 ntBASIC2.07□□□□□ -2.08
VTI1AQ96AJ9 SNORD115-27-201ENST00000364430 82 ntBASIC2.07□□□□□ -2.08
VTI1AQ96AJ9 MIR18B-201ENST00000454574 71 ntBASIC2.07□□□□□ -2.08
VTI1AQ96AJ9 Y_RNA.685-201ENST00000516532 108 ntBASIC2.07□□□□□ -2.08
VTI1AQ96AJ9 MIR548BB-201ENST00000626714 66 ntBASIC2.07□□□□□ -2.08
VTI1AQ96AJ9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
VTI1AQ96AJ9 Y_RNA.57-201ENST00000362806 113 ntBASIC2.06□□□□□ -2.08
VTI1AQ96AJ9 RNU1-36P-201ENST00000365130 165 ntBASIC2.06□□□□□ -2.08
VTI1AQ96AJ9 RNU6-571P-201ENST00000384128 107 ntBASIC2.06□□□□□ -2.08
VTI1AQ96AJ9 SNORA75.2-201ENST00000391138 150 ntBASIC2.06□□□□□ -2.08
VTI1AQ96AJ9 SNORA75.3-201ENST00000391231 150 ntBASIC2.06□□□□□ -2.08
VTI1AQ96AJ9 SNORD93-201ENST00000408813 74 ntBASIC2.06□□□□□ -2.08
VTI1AQ96AJ9 Y_RNA.611-201ENST00000410682 108 ntBASIC2.06□□□□□ -2.08
VTI1AQ96AJ9 RNU7-171P-201ENST00000459581 62 ntBASIC2.06□□□□□ -2.08
VTI1AQ96AJ9 RNU6-531P-201ENST00000516694 104 ntBASIC2.06□□□□□ -2.08
VTI1AQ96AJ9 RNA5SP364-201ENST00000516938 78 ntBASIC2.06□□□□□ -2.08
VTI1AQ96AJ9 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.06□□□□□ -2.08
VTI1AQ96AJ9 MIR8066-201ENST00000617280 78 ntBASIC2.06□□□□□ -2.08
VTI1AQ96AJ9 AC006160.2-201ENST00000637708 154 ntBASIC2.06□□□□□ -2.08
VTI1AQ96AJ9 Y_RNA.330-201ENST00000365230 109 ntBASIC2.05□□□□□ -2.08
VTI1AQ96AJ9 Y_RNA.363-201ENST00000365529 113 ntBASIC2.05□□□□□ -2.08
VTI1AQ96AJ9 RN7SKP88-201ENST00000516847 250 ntBASIC2.05□□□□□ -2.08
VTI1AQ96AJ9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.05□□□□□ -2.08
VTI1AQ96AJ9 7SK.8-201ENST00000612110 250 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms