Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 MIR1302-5-201ENST00000408164 150 ntBASIC1.22□□□□□ -2.21
ATP2A3Q93084 AC096949.1-201ENST00000412047 152 ntBASIC1.22□□□□□ -2.21
ATP2A3Q93084 RNU7-79P-201ENST00000516082 62 ntBASIC1.22□□□□□ -2.21
ATP2A3Q93084 RNU7-137P-201ENST00000516788 62 ntBASIC1.22□□□□□ -2.21
ATP2A3Q93084 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.22□□□□□ -2.21
ATP2A3Q93084 AP001318.4-201ENST00000616637 121 ntBASIC1.22□□□□□ -2.21
ATP2A3Q93084 AL662814.1-201ENST00000617364 121 ntBASIC1.22□□□□□ -2.21
ATP2A3Q93084 AC105081.1-201ENST00000617727 106 ntBASIC1.22□□□□□ -2.21
ATP2A3Q93084 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.22□□□□□ -2.21
ATP2A3Q93084 RNU6-1099P-201ENST00000363533 107 ntBASIC1.21□□□□□ -2.22
ATP2A3Q93084 Y_RNA.155-201ENST00000363632 101 ntBASIC1.21□□□□□ -2.22
ATP2A3Q93084 MIR488-201ENST00000365739 83 ntBASIC1.21□□□□□ -2.22
ATP2A3Q93084 MIR563-201ENST00000385080 79 ntBASIC1.21□□□□□ -2.22
ATP2A3Q93084 SNORA75.2-201ENST00000391138 150 ntBASIC1.21□□□□□ -2.22
ATP2A3Q93084 SNORA75.3-201ENST00000391231 150 ntBASIC1.21□□□□□ -2.22
ATP2A3Q93084 MIR1912-201ENST00000410389 80 ntBASIC1.21□□□□□ -2.22
ATP2A3Q93084 RNU6-1086P-201ENST00000410930 100 ntBASIC1.21□□□□□ -2.22
ATP2A3Q93084 MRPL35P3-201ENST00000421557 364 ntBASIC1.21□□□□□ -2.22
ATP2A3Q93084 snoU13.21-201ENST00000459368 105 ntBASIC1.21□□□□□ -2.22
ATP2A3Q93084 SNORD79.1-201ENST00000516069 84 ntBASIC1.21□□□□□ -2.22
ATP2A3Q93084 RNU6-1223P-201ENST00000517124 104 ntBASIC1.21□□□□□ -2.22
ATP2A3Q93084 AC141846.1-201ENST00000568348 142 ntBASIC1.21□□□□□ -2.22
ATP2A3Q93084 FAM71BP1-201ENST00000604431 523 ntBASIC1.21□□□□□ -2.22
ATP2A3Q93084 RNU6-1201P-201ENST00000384227 107 ntBASIC1.2□□□□□ -2.22
ATP2A3Q93084 MIR34C-201ENST00000384831 77 ntBASIC1.2□□□□□ -2.22
ATP2A3Q93084 MIR588-201ENST00000384900 83 ntBASIC1.2□□□□□ -2.22
ATP2A3Q93084 MT-TN-201ENST00000387400 73 ntBASIC1.2□□□□□ -2.22
ATP2A3Q93084 RNU6-1321P-201ENST00000390905 107 ntBASIC1.2□□□□□ -2.22
ATP2A3Q93084 SNORD12-201ENST00000391002 90 ntBASIC1.2□□□□□ -2.22
ATP2A3Q93084 SNORD77B-201ENST00000391112 67 ntBASIC1.2□□□□□ -2.22
ATP2A3Q93084 RNU6-613P-201ENST00000410412 108 ntBASIC1.2□□□□□ -2.22
ATP2A3Q93084 RNU6-733P-201ENST00000410759 104 ntBASIC1.2□□□□□ -2.22
ATP2A3Q93084 snoU13.2-201ENST00000459201 104 ntBASIC1.2□□□□□ -2.22
ATP2A3Q93084 RNU7-90P-201ENST00000459216 62 ntBASIC1.2□□□□□ -2.22
ATP2A3Q93084 RNU7-21P-201ENST00000459430 62 ntBASIC1.2□□□□□ -2.22
ATP2A3Q93084 AC087343.1-201ENST00000477341 475 ntBASIC1.2□□□□□ -2.22
ATP2A3Q93084 Y_RNA.677-201ENST00000516401 85 ntBASIC1.2□□□□□ -2.22
ATP2A3Q93084 RNU6-1006P-201ENST00000516998 103 ntBASIC1.2□□□□□ -2.22
ATP2A3Q93084 RNA5SP170-201ENST00000517150 101 ntBASIC1.2□□□□□ -2.22
ATP2A3Q93084 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.2□□□□□ -2.22
ATP2A3Q93084 MIR4264-201ENST00000583520 66 ntBASIC1.2□□□□□ -2.22
ATP2A3Q93084 MIR4295-201ENST00000585286 85 ntBASIC1.2□□□□□ -2.22
ATP2A3Q93084 MIR30D-201ENST00000362283 70 ntBASIC1.19□□□□□ -2.22
ATP2A3Q93084 MIR96-201ENST00000362288 78 ntBASIC1.19□□□□□ -2.22
ATP2A3Q93084 RNU6-832P-201ENST00000363319 107 ntBASIC1.19□□□□□ -2.22
ATP2A3Q93084 Y_RNA.205-201ENST00000364128 113 ntBASIC1.19□□□□□ -2.22
ATP2A3Q93084 SNORD115-35-201ENST00000365122 82 ntBASIC1.19□□□□□ -2.22
ATP2A3Q93084 RNU6-409P-201ENST00000384114 104 ntBASIC1.19□□□□□ -2.22
ATP2A3Q93084 Y_RNA.448-201ENST00000384185 108 ntBASIC1.19□□□□□ -2.22
ATP2A3Q93084 Y_RNA.507-201ENST00000384500 99 ntBASIC1.19□□□□□ -2.22
ATP2A3Q93084 RNU7-2P-201ENST00000516096 62 ntBASIC1.19□□□□□ -2.22
ATP2A3Q93084 RNU6-795P-201ENST00000516323 103 ntBASIC1.19□□□□□ -2.22
ATP2A3Q93084 MIR4694-201ENST00000578534 80 ntBASIC1.19□□□□□ -2.22
ATP2A3Q93084 MIR376B-201ENST00000614515 100 ntBASIC1.19□□□□□ -2.22
ATP2A3Q93084 AC012531.4-201ENST00000616509 177 ntBASIC1.19□□□□□ -2.22
ATP2A3Q93084 RNU6-1313P-201ENST00000362622 102 ntBASIC1.18□□□□□ -2.22
ATP2A3Q93084 RNY3P2-201ENST00000362918 102 ntBASIC1.18□□□□□ -2.22
ATP2A3Q93084 RNU1-124P-201ENST00000363861 145 ntBASIC1.18□□□□□ -2.22
ATP2A3Q93084 RNU1-93P-201ENST00000364704 169 ntBASIC1.18□□□□□ -2.22
ATP2A3Q93084 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
ATP2A3Q93084 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.18□□□□□ -2.22
ATP2A3Q93084 RPS29P1-201ENST00000465274 159 ntBASIC1.18□□□□□ -2.22
ATP2A3Q93084 PVT1_3.1-201ENST00000620853 95 ntBASIC1.18□□□□□ -2.22
ATP2A3Q93084 AC008163.1-202ENST00000636004 2889 ntBASIC1.18□□□□□ -2.22
ATP2A3Q93084 MIR377-201ENST00000362145 69 ntBASIC1.17□□□□□ -2.22
ATP2A3Q93084 Y_RNA.78-201ENST00000362970 110 ntBASIC1.17□□□□□ -2.22
ATP2A3Q93084 SNORD114-27-201ENST00000363766 70 ntBASIC1.17□□□□□ -2.22
ATP2A3Q93084 RNU6-49P-201ENST00000384256 107 ntBASIC1.17□□□□□ -2.22
ATP2A3Q93084 SNORA2B-201ENST00000384583 137 ntBASIC1.17□□□□□ -2.22
ATP2A3Q93084 MIR520E-201ENST00000384867 87 ntBASIC1.17□□□□□ -2.22
ATP2A3Q93084 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.17□□□□□ -2.22
ATP2A3Q93084 AC015818.7-201ENST00000428754 109 ntBASIC1.17□□□□□ -2.22
ATP2A3Q93084 AC087499.7-201ENST00000441958 109 ntBASIC1.17□□□□□ -2.22
ATP2A3Q93084 RPS29P28-201ENST00000446439 141 ntBASIC1.17□□□□□ -2.22
ATP2A3Q93084 RNU7-62P-201ENST00000458856 62 ntBASIC1.17□□□□□ -2.22
ATP2A3Q93084 MIR5582-201ENST00000579697 68 ntBASIC1.17□□□□□ -2.22
ATP2A3Q93084 RNU6-949P-201ENST00000384040 107 ntBASIC1.16□□□□□ -2.22
ATP2A3Q93084 RNU6-1165P-201ENST00000410119 107 ntBASIC1.16□□□□□ -2.22
ATP2A3Q93084 AC002429.1-201ENST00000437672 148 ntBASIC1.16□□□□□ -2.22
ATP2A3Q93084 DEFB131E-201ENST00000532329 154 ntBASIC1.16□□□□□ -2.22
ATP2A3Q93084 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
ATP2A3Q93084 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
ATP2A3Q93084 RNU6-1255P-201ENST00000363434 112 ntBASIC1.15□□□□□ -2.23
ATP2A3Q93084 SNORD113.3-201ENST00000364630 78 ntBASIC1.15□□□□□ -2.23
ATP2A3Q93084 Y_RNA.374-201ENST00000365606 101 ntBASIC1.15□□□□□ -2.23
ATP2A3Q93084 RNY1P7-201ENST00000384743 110 ntBASIC1.15□□□□□ -2.23
ATP2A3Q93084 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
ATP2A3Q93084 U8.15-201ENST00000390947 134 ntBASIC1.15□□□□□ -2.23
ATP2A3Q93084 RNA5SP237-201ENST00000410414 113 ntBASIC1.15□□□□□ -2.23
ATP2A3Q93084 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.15□□□□□ -2.23
ATP2A3Q93084 MIR4777-201ENST00000583710 86 ntBASIC1.15□□□□□ -2.23
ATP2A3Q93084 MIR151B-201ENST00000584249 96 ntBASIC1.15□□□□□ -2.23
ATP2A3Q93084 AC020891.4-201ENST00000605745 93 ntBASIC1.15□□□□□ -2.23
ATP2A3Q93084 MIR4679-1-201ENST00000637619 75 ntBASIC1.15□□□□□ -2.23
ATP2A3Q93084 Y_RNA.43-201ENST00000362670 111 ntBASIC1.14□□□□□ -2.23
ATP2A3Q93084 RNU6-170P-201ENST00000362832 104 ntBASIC1.14□□□□□ -2.23
ATP2A3Q93084 Y_RNA.168-201ENST00000363740 102 ntBASIC1.14□□□□□ -2.23
ATP2A3Q93084 RNU6-1131P-201ENST00000364955 107 ntBASIC1.14□□□□□ -2.23
ATP2A3Q93084 RNU6-580P-201ENST00000365159 107 ntBASIC1.14□□□□□ -2.23
ATP2A3Q93084 Y_RNA.342-201ENST00000365352 113 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 217.8 ms