Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL512310.12-203ENST00000640543 90 ntBASIC1.15□□□□□ -2.22
SNED1Q8TER0 Y_RNA.107-201ENST00000363190 121 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 RNU6-832P-201ENST00000363319 107 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 Y_RNA.220-201ENST00000364244 109 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 SNORA18-201ENST00000384416 132 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 SNORD38B-201ENST00000384690 67 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 RNU6-1237P-201ENST00000384777 107 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 MIR618-201ENST00000385287 98 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 RNU6-602P-201ENST00000411155 105 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 RPS27P16-201ENST00000425758 201 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 MIR1270-201ENST00000459320 83 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 HAR1A.1-201ENST00000459583 118 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 RNU7-41P-201ENST00000515917 61 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 RNU6-1018P-201ENST00000516577 106 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 RNA5SP330-201ENST00000517096 96 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 CYP3A52P-201ENST00000563326 91 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 MIR4694-201ENST00000578534 80 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 MIR548AO-201ENST00000579992 96 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 SNORD38B-202ENST00000625943 69 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 MIR4251-201ENST00000635819 61 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 Z97988.1-201ENST00000637697 135 ntBASIC1.15□□□□□ -2.23
SNED1Q8TER0 SNORD73B-201ENST00000364394 72 ntBASIC1.14□□□□□ -2.23
SNED1Q8TER0 MIR488-201ENST00000365739 83 ntBASIC1.14□□□□□ -2.23
SNED1Q8TER0 RNU6-679P-201ENST00000391003 106 ntBASIC1.14□□□□□ -2.23
SNED1Q8TER0 AC015688.6-201ENST00000577737 104 ntBASIC1.14□□□□□ -2.23
SNED1Q8TER0 MIR8065-201ENST00000620577 100 ntBASIC1.14□□□□□ -2.23
SNED1Q8TER0 SNORD115-35-201ENST00000365122 82 ntBASIC1.13□□□□□ -2.23
SNED1Q8TER0 RNY1P7-201ENST00000384743 110 ntBASIC1.13□□□□□ -2.23
SNED1Q8TER0 RNU6-1086P-201ENST00000410930 100 ntBASIC1.13□□□□□ -2.23
SNED1Q8TER0 RPS29P28-201ENST00000446439 141 ntBASIC1.13□□□□□ -2.23
SNED1Q8TER0 RNU7-79P-201ENST00000516082 62 ntBASIC1.13□□□□□ -2.23
SNED1Q8TER0 RNU6-947P-201ENST00000516264 106 ntBASIC1.13□□□□□ -2.23
SNED1Q8TER0 RNU6-795P-201ENST00000516323 103 ntBASIC1.13□□□□□ -2.23
SNED1Q8TER0 RNU6-922P-201ENST00000516753 99 ntBASIC1.13□□□□□ -2.23
SNED1Q8TER0 RNU6-158P-201ENST00000517104 100 ntBASIC1.13□□□□□ -2.23
SNED1Q8TER0 AC090844.1-201ENST00000422019 156 ntBASIC1.12□□□□□ -2.23
SNED1Q8TER0 RNU7-2P-201ENST00000516096 62 ntBASIC1.12□□□□□ -2.23
SNED1Q8TER0 RNU7-35P-201ENST00000517174 62 ntBASIC1.12□□□□□ -2.23
SNED1Q8TER0 MIR4698-201ENST00000577795 80 ntBASIC1.12□□□□□ -2.23
SNED1Q8TER0 AC096720.1-201ENST00000604441 183 ntBASIC1.12□□□□□ -2.23
SNED1Q8TER0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
SNED1Q8TER0 AL442128.1-201ENST00000615151 90 ntBASIC1.12□□□□□ -2.23
SNED1Q8TER0 AC012531.4-201ENST00000616509 177 ntBASIC1.12□□□□□ -2.23
SNED1Q8TER0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
SNED1Q8TER0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
SNED1Q8TER0 RNU6-170P-201ENST00000362832 104 ntBASIC1.11□□□□□ -2.23
SNED1Q8TER0 Y_RNA.258-201ENST00000364613 105 ntBASIC1.11□□□□□ -2.23
SNED1Q8TER0 AL353813.1-201ENST00000440700 253 ntBASIC1.11□□□□□ -2.23
SNED1Q8TER0 RNU7-61P-201ENST00000515897 61 ntBASIC1.11□□□□□ -2.23
SNED1Q8TER0 Y_RNA.659-201ENST00000515994 113 ntBASIC1.11□□□□□ -2.23
SNED1Q8TER0 RNU6-844P-201ENST00000517175 102 ntBASIC1.11□□□□□ -2.23
SNED1Q8TER0 MALAT1.1-201ENST00000618249 95 ntBASIC1.11□□□□□ -2.23
SNED1Q8TER0 AL109933.3-201ENST00000619095 188 ntBASIC1.11□□□□□ -2.23
SNED1Q8TER0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
SNED1Q8TER0 SNORD45B-201ENST00000364617 72 ntBASIC1.1□□□□□ -2.23
SNED1Q8TER0 Y_RNA.342-201ENST00000365352 113 ntBASIC1.1□□□□□ -2.23
SNED1Q8TER0 RNU6-1201P-201ENST00000384227 107 ntBASIC1.1□□□□□ -2.23
SNED1Q8TER0 Y_RNA.558-201ENST00000384685 113 ntBASIC1.1□□□□□ -2.23
SNED1Q8TER0 MIR206-201ENST00000384872 86 ntBASIC1.1□□□□□ -2.23
SNED1Q8TER0 RNU6-644P-201ENST00000391155 98 ntBASIC1.1□□□□□ -2.23
SNED1Q8TER0 RNA5SP237-201ENST00000410414 113 ntBASIC1.1□□□□□ -2.23
SNED1Q8TER0 SNORD67.1-201ENST00000516618 108 ntBASIC1.1□□□□□ -2.23
SNED1Q8TER0 AC019288.1-201ENST00000557918 224 ntBASIC1.1□□□□□ -2.23
SNED1Q8TER0 MIR3192-201ENST00000584920 77 ntBASIC1.1□□□□□ -2.23
SNED1Q8TER0 AL357312.1-201ENST00000603879 298 ntBASIC1.1□□□□□ -2.23
SNED1Q8TER0 PRELID3BP2-201ENST00000605362 201 ntBASIC1.1□□□□□ -2.23
SNED1Q8TER0 GHRLOS.1-201ENST00000610995 70 ntBASIC1.1□□□□□ -2.23
SNED1Q8TER0 RNU6-1313P-201ENST00000362622 102 ntBASIC1.09□□□□□ -2.23
SNED1Q8TER0 SNORD41-201ENST00000386967 70 ntBASIC1.09□□□□□ -2.23
SNED1Q8TER0 MIR1302-4-201ENST00000408701 150 ntBASIC1.09□□□□□ -2.23
SNED1Q8TER0 AC244023.1-201ENST00000426884 112 ntBASIC1.09□□□□□ -2.23
SNED1Q8TER0 AC004941.2-201ENST00000427009 228 ntBASIC1.09□□□□□ -2.23
SNED1Q8TER0 SNORD111.1-201ENST00000516421 86 ntBASIC1.09□□□□□ -2.23
SNED1Q8TER0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.09□□□□□ -2.23
SNED1Q8TER0 MIR548Z-201ENST00000584743 97 ntBASIC1.09□□□□□ -2.23
SNED1Q8TER0 AC242498.1-201ENST00000604134 111 ntBASIC1.09□□□□□ -2.23
SNED1Q8TER0 AC105081.1-201ENST00000617727 106 ntBASIC1.09□□□□□ -2.23
SNED1Q8TER0 Y_RNA.377-201ENST00000365644 108 ntBASIC1.08□□□□□ -2.24
SNED1Q8TER0 SNORA26.2-201ENST00000390922 122 ntBASIC1.08□□□□□ -2.24
SNED1Q8TER0 UBL5P1-201ENST00000507979 193 ntBASIC1.08□□□□□ -2.24
SNED1Q8TER0 RNU6-162P-201ENST00000516228 103 ntBASIC1.08□□□□□ -2.24
SNED1Q8TER0 RNA5SP121-201ENST00000516537 101 ntBASIC1.08□□□□□ -2.24
SNED1Q8TER0 AC103810.9-201ENST00000606688 112 ntBASIC1.08□□□□□ -2.24
SNED1Q8TER0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.08□□□□□ -2.24
SNED1Q8TER0 AC091304.10-201ENST00000641554 121 ntBASIC1.08□□□□□ -2.24
SNED1Q8TER0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SNED1Q8TER0 Y_RNA.95-201ENST00000363079 95 ntBASIC1.07□□□□□ -2.24
SNED1Q8TER0 SNORA25.3-201ENST00000363205 127 ntBASIC1.07□□□□□ -2.24
SNED1Q8TER0 SNORD114-10-201ENST00000363409 72 ntBASIC1.07□□□□□ -2.24
SNED1Q8TER0 RNA5SP48-201ENST00000363969 126 ntBASIC1.07□□□□□ -2.24
SNED1Q8TER0 RNU6-865P-201ENST00000364772 107 ntBASIC1.07□□□□□ -2.24
SNED1Q8TER0 RNY1P13-201ENST00000365030 105 ntBASIC1.07□□□□□ -2.24
SNED1Q8TER0 RNU6-396P-201ENST00000365369 105 ntBASIC1.07□□□□□ -2.24
SNED1Q8TER0 Y_RNA.448-201ENST00000384185 108 ntBASIC1.07□□□□□ -2.24
SNED1Q8TER0 Y_RNA.467-201ENST00000384297 102 ntBASIC1.07□□□□□ -2.24
SNED1Q8TER0 AC096949.1-201ENST00000412047 152 ntBASIC1.07□□□□□ -2.24
SNED1Q8TER0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.07□□□□□ -2.24
SNED1Q8TER0 MRPL35P3-201ENST00000421557 364 ntBASIC1.07□□□□□ -2.24
SNED1Q8TER0 RPL39P39-201ENST00000455840 151 ntBASIC1.07□□□□□ -2.24
SNED1Q8TER0 AL133373.1-201ENST00000497098 94 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 213.3 ms