Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 SNORD45.1-201ENST00000363181 77 ntBASIC2.86□□□□□ -1.95
NKX2-3Q8TAU0 RNA5SP48-201ENST00000363969 126 ntBASIC2.86□□□□□ -1.95
NKX2-3Q8TAU0 HMGN2P35-201ENST00000412164 270 ntBASIC2.86□□□□□ -1.95
NKX2-3Q8TAU0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.86□□□□□ -1.95
NKX2-3Q8TAU0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
NKX2-3Q8TAU0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
NKX2-3Q8TAU0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NKX2-3Q8TAU0 RNU4-58P-201ENST00000363192 141 ntBASIC2.85□□□□□ -1.95
NKX2-3Q8TAU0 Y_RNA.164-201ENST00000363709 102 ntBASIC2.85□□□□□ -1.95
NKX2-3Q8TAU0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NKX2-3Q8TAU0 MIR2113-201ENST00000459007 91 ntBASIC2.85□□□□□ -1.95
NKX2-3Q8TAU0 AC026436.1-201ENST00000510537 270 ntBASIC2.85□□□□□ -1.95
NKX2-3Q8TAU0 RNU6-322P-201ENST00000516010 103 ntBASIC2.85□□□□□ -1.95
NKX2-3Q8TAU0 RNU6-977P-201ENST00000516411 103 ntBASIC2.85□□□□□ -1.95
NKX2-3Q8TAU0 RNU2-19P-201ENST00000517288 84 ntBASIC2.85□□□□□ -1.95
NKX2-3Q8TAU0 U6.81-201ENST00000612550 106 ntBASIC2.85□□□□□ -1.95
NKX2-3Q8TAU0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NKX2-3Q8TAU0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.85□□□□□ -1.95
NKX2-3Q8TAU0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NKX2-3Q8TAU0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NKX2-3Q8TAU0 MIR337-201ENST00000362281 93 ntBASIC2.84□□□□□ -1.95
NKX2-3Q8TAU0 SNORD113.1-201ENST00000363280 73 ntBASIC2.84□□□□□ -1.95
NKX2-3Q8TAU0 MT-TF-201ENST00000387314 71 ntBASIC2.84□□□□□ -1.95
NKX2-3Q8TAU0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
NKX2-3Q8TAU0 HMGN2P23-201ENST00000456759 269 ntBASIC2.84□□□□□ -1.95
NKX2-3Q8TAU0 MIR4264-201ENST00000583520 66 ntBASIC2.84□□□□□ -1.95
NKX2-3Q8TAU0 MIR6740-201ENST00000618268 113 ntBASIC2.84□□□□□ -1.95
NKX2-3Q8TAU0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NKX2-3Q8TAU0 AC016717.2-201ENST00000609089 5141 ntBASIC2.83□□□□□ -1.96
NKX2-3Q8TAU0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
NKX2-3Q8TAU0 RNU6-53P-201ENST00000365367 106 ntBASIC2.83□□□□□ -1.96
NKX2-3Q8TAU0 RNU1-138P-201ENST00000384093 164 ntBASIC2.83□□□□□ -1.96
NKX2-3Q8TAU0 RNU6-1165P-201ENST00000410119 107 ntBASIC2.83□□□□□ -1.96
NKX2-3Q8TAU0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
NKX2-3Q8TAU0 RNU6-664P-201ENST00000362381 107 ntBASIC2.82□□□□□ -1.96
NKX2-3Q8TAU0 Y_RNA.226-201ENST00000364337 114 ntBASIC2.82□□□□□ -1.96
NKX2-3Q8TAU0 RNU6-396P-201ENST00000365369 105 ntBASIC2.82□□□□□ -1.96
NKX2-3Q8TAU0 SNORA24B-201ENST00000384176 131 ntBASIC2.82□□□□□ -1.96
NKX2-3Q8TAU0 SNORA31.15-201ENST00000516771 132 ntBASIC2.82□□□□□ -1.96
NKX2-3Q8TAU0 RNU11-2P-201ENST00000516898 142 ntBASIC2.82□□□□□ -1.96
NKX2-3Q8TAU0 MIR3670-2-201ENST00000582974 65 ntBASIC2.82□□□□□ -1.96
NKX2-3Q8TAU0 MIR3670-1-201ENST00000584160 65 ntBASIC2.82□□□□□ -1.96
NKX2-3Q8TAU0 MIR3670-3-201ENST00000584855 65 ntBASIC2.82□□□□□ -1.96
NKX2-3Q8TAU0 MIR3670-4-201ENST00000612260 65 ntBASIC2.82□□□□□ -1.96
NKX2-3Q8TAU0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
NKX2-3Q8TAU0 RNU1-51P-201ENST00000365345 176 ntBASIC2.81□□□□□ -1.96
NKX2-3Q8TAU0 RNA5SP270-201ENST00000411361 118 ntBASIC2.81□□□□□ -1.96
NKX2-3Q8TAU0 RNU6-531P-201ENST00000516694 104 ntBASIC2.81□□□□□ -1.96
NKX2-3Q8TAU0 MIR5092-201ENST00000583139 88 ntBASIC2.81□□□□□ -1.96
NKX2-3Q8TAU0 RNU7-10P-201ENST00000607194 63 ntBASIC2.81□□□□□ -1.96
NKX2-3Q8TAU0 TRDV1-202ENST00000621643 102 ntBASIC2.81□□□□□ -1.96
NKX2-3Q8TAU0 RNU6-1260P-201ENST00000362944 107 ntBASIC2.8□□□□□ -1.96
NKX2-3Q8TAU0 SNORA40.6-201ENST00000391153 128 ntBASIC2.8□□□□□ -1.96
NKX2-3Q8TAU0 MIR4696-201ENST00000581431 70 ntBASIC2.8□□□□□ -1.96
NKX2-3Q8TAU0 AP000942.3-201ENST00000603702 160 ntBASIC2.8□□□□□ -1.96
NKX2-3Q8TAU0 MTRNR2L2-201ENST00000604882 87 ntBASIC2.8□□□□□ -1.96
NKX2-3Q8TAU0 U1.36-201ENST00000620684 176 ntBASIC2.8□□□□□ -1.96
NKX2-3Q8TAU0 MIR1291-201ENST00000627649 87 ntBASIC2.8□□□□□ -1.96
NKX2-3Q8TAU0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
NKX2-3Q8TAU0 Y_RNA.236-201ENST00000364427 111 ntBASIC2.79□□□□□ -1.96
NKX2-3Q8TAU0 MT-TN-201ENST00000387400 73 ntBASIC2.79□□□□□ -1.96
NKX2-3Q8TAU0 RNU6-360P-201ENST00000390944 104 ntBASIC2.79□□□□□ -1.96
NKX2-3Q8TAU0 MIR1302-7-201ENST00000408841 72 ntBASIC2.79□□□□□ -1.96
NKX2-3Q8TAU0 MIR5089-201ENST00000580047 84 ntBASIC2.79□□□□□ -1.96
NKX2-3Q8TAU0 MIR4491-201ENST00000581087 68 ntBASIC2.79□□□□□ -1.96
NKX2-3Q8TAU0 MIR3140-201ENST00000583685 90 ntBASIC2.79□□□□□ -1.96
NKX2-3Q8TAU0 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.79□□□□□ -1.96
NKX2-3Q8TAU0 MIR6873-201ENST00000622788 63 ntBASIC2.79□□□□□ -1.96
NKX2-3Q8TAU0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NKX2-3Q8TAU0 ZNF209P-201ENST00000593450 2304 ntBASIC2.79□□□□□ -1.96
NKX2-3Q8TAU0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.78□□□□□ -1.96
NKX2-3Q8TAU0 SNORD101-201ENST00000384027 73 ntBASIC2.78□□□□□ -1.96
NKX2-3Q8TAU0 RNU1-52P-201ENST00000384190 164 ntBASIC2.78□□□□□ -1.96
NKX2-3Q8TAU0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.78□□□□□ -1.96
NKX2-3Q8TAU0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
NKX2-3Q8TAU0 RNU6-824P-201ENST00000363724 104 ntBASIC2.77□□□□□ -1.97
NKX2-3Q8TAU0 Y_RNA.536-201ENST00000384621 113 ntBASIC2.77□□□□□ -1.97
NKX2-3Q8TAU0 SNORD100-201ENST00000408573 76 ntBASIC2.77□□□□□ -1.97
NKX2-3Q8TAU0 RNA5SP501-201ENST00000410990 112 ntBASIC2.77□□□□□ -1.97
NKX2-3Q8TAU0 RNU7-195P-201ENST00000458793 62 ntBASIC2.77□□□□□ -1.97
NKX2-3Q8TAU0 TRAJ51-201ENST00000504127 63 ntBASIC2.77□□□□□ -1.97
NKX2-3Q8TAU0 RNU6-752P-201ENST00000516376 102 ntBASIC2.77□□□□□ -1.97
NKX2-3Q8TAU0 MIR548H5-201ENST00000580314 60 ntBASIC2.77□□□□□ -1.97
NKX2-3Q8TAU0 AC010297.1-201ENST00000623948 149 ntBASIC2.77□□□□□ -1.97
NKX2-3Q8TAU0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NKX2-3Q8TAU0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NKX2-3Q8TAU0 RNU6-829P-201ENST00000363700 112 ntBASIC2.76□□□□□ -1.97
NKX2-3Q8TAU0 Y_RNA.588-201ENST00000391254 102 ntBASIC2.76□□□□□ -1.97
NKX2-3Q8TAU0 RPL30P7-201ENST00000479312 323 ntBASIC2.76□□□□□ -1.97
NKX2-3Q8TAU0 SNORA25.16-201ENST00000516741 121 ntBASIC2.76□□□□□ -1.97
NKX2-3Q8TAU0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
NKX2-3Q8TAU0 MIR1287-201ENST00000408492 90 ntBASIC2.75□□□□□ -1.97
NKX2-3Q8TAU0 Y_RNA.809-201ENST00000516058 95 ntBASIC2.75□□□□□ -1.97
NKX2-3Q8TAU0 SNORD111.1-201ENST00000516421 86 ntBASIC2.75□□□□□ -1.97
NKX2-3Q8TAU0 MIR4529-201ENST00000578110 78 ntBASIC2.75□□□□□ -1.97
NKX2-3Q8TAU0 AL137847.3-201ENST00000611521 109 ntBASIC2.75□□□□□ -1.97
NKX2-3Q8TAU0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NKX2-3Q8TAU0 U8.13-201ENST00000390842 128 ntBASIC2.74□□□□□ -1.97
NKX2-3Q8TAU0 RNU6-604P-201ENST00000390917 100 ntBASIC2.74□□□□□ -1.97
NKX2-3Q8TAU0 AL606490.4-201ENST00000423117 127 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 240.3 ms