Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
NUP43Q8NFH3 MIR103A2-201ENST00000362154 78 ntBASIC1.76□□□□□ -2.13
NUP43Q8NFH3 RNU4-52P-201ENST00000384209 138 ntBASIC1.76□□□□□ -2.13
NUP43Q8NFH3 MIR30A-201ENST00000385092 71 ntBASIC1.76□□□□□ -2.13
NUP43Q8NFH3 U8.13-201ENST00000390842 128 ntBASIC1.76□□□□□ -2.13
NUP43Q8NFH3 SUMO2P12-201ENST00000405924 140 ntBASIC1.76□□□□□ -2.13
NUP43Q8NFH3 AC245517.4-201ENST00000448601 281 ntBASIC1.76□□□□□ -2.13
NUP43Q8NFH3 SNRPGP12-201ENST00000449481 213 ntBASIC1.76□□□□□ -2.13
NUP43Q8NFH3 RNU7-171P-201ENST00000459581 62 ntBASIC1.76□□□□□ -2.13
NUP43Q8NFH3 RNU6-165P-201ENST00000517170 99 ntBASIC1.76□□□□□ -2.13
NUP43Q8NFH3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
NUP43Q8NFH3 RNA5SP133-201ENST00000363368 119 ntBASIC1.75□□□□□ -2.13
NUP43Q8NFH3 RNU6-509P-201ENST00000363519 107 ntBASIC1.75□□□□□ -2.13
NUP43Q8NFH3 RNU6-1125P-201ENST00000363601 107 ntBASIC1.75□□□□□ -2.13
NUP43Q8NFH3 Y_RNA.191-201ENST00000363972 113 ntBASIC1.75□□□□□ -2.13
NUP43Q8NFH3 RNU6-480P-201ENST00000384332 107 ntBASIC1.75□□□□□ -2.13
NUP43Q8NFH3 RNA5SP95-201ENST00000410319 137 ntBASIC1.75□□□□□ -2.13
NUP43Q8NFH3 RNA5SP395-201ENST00000516567 118 ntBASIC1.75□□□□□ -2.13
NUP43Q8NFH3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.75□□□□□ -2.13
NUP43Q8NFH3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.75□□□□□ -2.13
NUP43Q8NFH3 MIR337-201ENST00000362281 93 ntBASIC1.74□□□□□ -2.13
NUP43Q8NFH3 RNU6-633P-201ENST00000362612 103 ntBASIC1.74□□□□□ -2.13
NUP43Q8NFH3 RNU6-580P-201ENST00000365159 107 ntBASIC1.74□□□□□ -2.13
NUP43Q8NFH3 MT-TF-201ENST00000387314 71 ntBASIC1.74□□□□□ -2.13
NUP43Q8NFH3 RNU4-83P-201ENST00000410863 133 ntBASIC1.74□□□□□ -2.13
NUP43Q8NFH3 RNA5SP489-201ENST00000410986 109 ntBASIC1.74□□□□□ -2.13
NUP43Q8NFH3 AC079140.2-201ENST00000506193 142 ntBASIC1.74□□□□□ -2.13
NUP43Q8NFH3 SNORA44.1-201ENST00000517031 108 ntBASIC1.74□□□□□ -2.13
NUP43Q8NFH3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.74□□□□□ -2.13
NUP43Q8NFH3 MIR548BB-201ENST00000626714 66 ntBASIC1.74□□□□□ -2.13
NUP43Q8NFH3 AC006160.2-201ENST00000637708 154 ntBASIC1.74□□□□□ -2.13
NUP43Q8NFH3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NUP43Q8NFH3 AC008163.1-202ENST00000636004 2889 ntBASIC1.74□□□□□ -2.13
NUP43Q8NFH3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
NUP43Q8NFH3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
NUP43Q8NFH3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
NUP43Q8NFH3 Y_RNA.119-201ENST00000363301 96 ntBASIC1.73□□□□□ -2.13
NUP43Q8NFH3 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
NUP43Q8NFH3 MIR1255A-201ENST00000408338 113 ntBASIC1.73□□□□□ -2.13
NUP43Q8NFH3 RNA5SP225-201ENST00000410874 135 ntBASIC1.73□□□□□ -2.13
NUP43Q8NFH3 MIR3664-201ENST00000579074 99 ntBASIC1.73□□□□□ -2.13
NUP43Q8NFH3 MIR4500-201ENST00000579472 76 ntBASIC1.73□□□□□ -2.13
NUP43Q8NFH3 MIR4781-201ENST00000585250 76 ntBASIC1.73□□□□□ -2.13
NUP43Q8NFH3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.73□□□□□ -2.13
NUP43Q8NFH3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
NUP43Q8NFH3 SNORD115-27-201ENST00000364430 82 ntBASIC1.72□□□□□ -2.13
NUP43Q8NFH3 Y_RNA.611-201ENST00000410682 108 ntBASIC1.72□□□□□ -2.13
NUP43Q8NFH3 AL161932.1-201ENST00000437408 146 ntBASIC1.72□□□□□ -2.13
NUP43Q8NFH3 MIR4666B-201ENST00000578142 81 ntBASIC1.72□□□□□ -2.13
NUP43Q8NFH3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
NUP43Q8NFH3 SNORD33-201ENST00000362761 85 ntBASIC1.71□□□□□ -2.14
NUP43Q8NFH3 RNU1-17P-201ENST00000363022 152 ntBASIC1.71□□□□□ -2.14
NUP43Q8NFH3 Y_RNA.426-201ENST00000384068 113 ntBASIC1.71□□□□□ -2.14
NUP43Q8NFH3 RNU6-850P-201ENST00000516934 103 ntBASIC1.71□□□□□ -2.14
NUP43Q8NFH3 AL512310.8-201ENST00000550183 120 ntBASIC1.71□□□□□ -2.14
NUP43Q8NFH3 MIR3937-201ENST00000580135 106 ntBASIC1.71□□□□□ -2.14
NUP43Q8NFH3 RNU6-571P-201ENST00000384128 107 ntBASIC1.7□□□□□ -2.14
NUP43Q8NFH3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.7□□□□□ -2.14
NUP43Q8NFH3 BX276092.1-201ENST00000427368 251 ntBASIC1.7□□□□□ -2.14
NUP43Q8NFH3 AC003989.2-201ENST00000440224 169 ntBASIC1.7□□□□□ -2.14
NUP43Q8NFH3 AC087499.7-201ENST00000441958 109 ntBASIC1.7□□□□□ -2.14
NUP43Q8NFH3 RNA5SP182-201ENST00000516064 82 ntBASIC1.7□□□□□ -2.14
NUP43Q8NFH3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.7□□□□□ -2.14
NUP43Q8NFH3 MIR4419B-201ENST00000577260 68 ntBASIC1.7□□□□□ -2.14
NUP43Q8NFH3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.7□□□□□ -2.14
NUP43Q8NFH3 snoU13.31-201ENST00000607291 104 ntBASIC1.7□□□□□ -2.14
NUP43Q8NFH3 Y_RNA.57-201ENST00000362806 113 ntBASIC1.69□□□□□ -2.14
NUP43Q8NFH3 Y_RNA.508-201ENST00000384502 114 ntBASIC1.69□□□□□ -2.14
NUP43Q8NFH3 MIR583-201ENST00000384846 75 ntBASIC1.69□□□□□ -2.14
NUP43Q8NFH3 Y_RNA.588-201ENST00000391254 102 ntBASIC1.69□□□□□ -2.14
NUP43Q8NFH3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.69□□□□□ -2.14
NUP43Q8NFH3 MIR8066-201ENST00000617280 78 ntBASIC1.69□□□□□ -2.14
NUP43Q8NFH3 Y_RNA.313-201ENST00000365095 103 ntBASIC1.68□□□□□ -2.14
NUP43Q8NFH3 MIR18B-201ENST00000454574 71 ntBASIC1.68□□□□□ -2.14
NUP43Q8NFH3 MIR4491-201ENST00000581087 68 ntBASIC1.68□□□□□ -2.14
NUP43Q8NFH3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.68□□□□□ -2.14
NUP43Q8NFH3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
NUP43Q8NFH3 Y_RNA.437-201ENST00000384113 113 ntBASIC1.67□□□□□ -2.14
NUP43Q8NFH3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
NUP43Q8NFH3 RPS27P16-201ENST00000425758 201 ntBASIC1.67□□□□□ -2.14
NUP43Q8NFH3 SNORA25.16-201ENST00000516741 121 ntBASIC1.67□□□□□ -2.14
NUP43Q8NFH3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.67□□□□□ -2.14
NUP43Q8NFH3 MIR3198-2-201ENST00000577868 80 ntBASIC1.67□□□□□ -2.14
NUP43Q8NFH3 MIR4448-201ENST00000584360 86 ntBASIC1.67□□□□□ -2.14
NUP43Q8NFH3 MIR6845-201ENST00000613182 61 ntBASIC1.67□□□□□ -2.14
NUP43Q8NFH3 uc_338.20-201ENST00000621563 178 ntBASIC1.67□□□□□ -2.14
NUP43Q8NFH3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
NUP43Q8NFH3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
NUP43Q8NFH3 Y_RNA.118-201ENST00000363300 101 ntBASIC1.66□□□□□ -2.14
NUP43Q8NFH3 RNU1-36P-201ENST00000365130 165 ntBASIC1.66□□□□□ -2.14
NUP43Q8NFH3 MIR9-3-201ENST00000385084 90 ntBASIC1.66□□□□□ -2.14
NUP43Q8NFH3 SNORA40.18-201ENST00000391200 128 ntBASIC1.66□□□□□ -2.14
NUP43Q8NFH3 Y_RNA.607-201ENST00000410597 98 ntBASIC1.66□□□□□ -2.14
NUP43Q8NFH3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.66□□□□□ -2.14
NUP43Q8NFH3 snoU13.21-201ENST00000459368 105 ntBASIC1.66□□□□□ -2.14
NUP43Q8NFH3 RNU6-531P-201ENST00000516694 104 ntBASIC1.66□□□□□ -2.14
NUP43Q8NFH3 RNU6-524P-201ENST00000384270 107 ntBASIC1.65□□□□□ -2.15
NUP43Q8NFH3 MIR499A-201ENST00000384903 122 ntBASIC1.65□□□□□ -2.15
NUP43Q8NFH3 RNU6-279P-201ENST00000391297 101 ntBASIC1.65□□□□□ -2.15
NUP43Q8NFH3 SNORD93-201ENST00000408813 74 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms