Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.96□□□□□ -2.56
CCDC112Q8NEF3 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.96□□□□□ -2.56
CCDC112Q8NEF3 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.96□□□□□ -2.56
CCDC112Q8NEF3 RNU6-728P-201ENST00000365375 104 ntBASIC-0.96□□□□□ -2.56
CCDC112Q8NEF3 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.96□□□□□ -2.56
CCDC112Q8NEF3 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.96□□□□□ -2.56
CCDC112Q8NEF3 SNORD63B-201ENST00000411005 70 ntBASIC-0.96□□□□□ -2.56
CCDC112Q8NEF3 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.97□□□□□ -2.56
CCDC112Q8NEF3 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.97□□□□□ -2.56
CCDC112Q8NEF3 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.97□□□□□ -2.56
CCDC112Q8NEF3 RNU6-524P-201ENST00000384270 107 ntBASIC-0.97□□□□□ -2.56
CCDC112Q8NEF3 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.97□□□□□ -2.56
CCDC112Q8NEF3 MIR617-201ENST00000385030 97 ntBASIC-0.97□□□□□ -2.56
CCDC112Q8NEF3 AC098614.3-201ENST00000438957 440 ntBASIC-0.97□□□□□ -2.56
CCDC112Q8NEF3 MTATP6P23-201ENST00000440153 476 ntBASIC-0.97□□□□□ -2.56
CCDC112Q8NEF3 SNORD57-201ENST00000448188 72 ntBASIC-0.97□□□□□ -2.56
CCDC112Q8NEF3 SNORD116-25-201ENST00000516517 92 ntBASIC-0.97□□□□□ -2.56
CCDC112Q8NEF3 AP001328.1-201ENST00000528550 176 ntBASIC-0.97□□□□□ -2.56
CCDC112Q8NEF3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.97□□□□□ -2.56
CCDC112Q8NEF3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.97□□□□□ -2.56
CCDC112Q8NEF3 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.98□□□□□ -2.57
CCDC112Q8NEF3 RNU6-823P-201ENST00000391042 103 ntBASIC-0.98□□□□□ -2.57
CCDC112Q8NEF3 RNU6-381P-201ENST00000391259 108 ntBASIC-0.98□□□□□ -2.57
CCDC112Q8NEF3 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.98□□□□□ -2.57
CCDC112Q8NEF3 RNU7-48P-201ENST00000458875 63 ntBASIC-0.98□□□□□ -2.57
CCDC112Q8NEF3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.98□□□□□ -2.57
CCDC112Q8NEF3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.98□□□□□ -2.57
CCDC112Q8NEF3 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.99□□□□□ -2.57
CCDC112Q8NEF3 RNU6-154P-201ENST00000384306 106 ntBASIC-0.99□□□□□ -2.57
CCDC112Q8NEF3 MIR1252-201ENST00000408861 65 ntBASIC-0.99□□□□□ -2.57
CCDC112Q8NEF3 SERF1AP1-201ENST00000514575 187 ntBASIC-0.99□□□□□ -2.57
CCDC112Q8NEF3 Y_RNA.70-201ENST00000362886 110 ntBASIC-1□□□□□ -2.57
CCDC112Q8NEF3 Y_RNA.197-201ENST00000364004 102 ntBASIC-1□□□□□ -2.57
CCDC112Q8NEF3 RNA5SP331-201ENST00000364986 107 ntBASIC-1□□□□□ -2.57
CCDC112Q8NEF3 Y_RNA.568-201ENST00000384742 113 ntBASIC-1□□□□□ -2.57
CCDC112Q8NEF3 MIR206-201ENST00000384872 86 ntBASIC-1□□□□□ -2.57
CCDC112Q8NEF3 RNA5SP266-201ENST00000410273 108 ntBASIC-1□□□□□ -2.57
CCDC112Q8NEF3 SNORD2.1-201ENST00000458762 69 ntBASIC-1□□□□□ -2.57
CCDC112Q8NEF3 RNU7-106P-201ENST00000459514 67 ntBASIC-1□□□□□ -2.57
CCDC112Q8NEF3 RNU2-35P-201ENST00000516446 142 ntBASIC-1□□□□□ -2.57
CCDC112Q8NEF3 RNU5B-6P-201ENST00000516765 68 ntBASIC-1□□□□□ -2.57
CCDC112Q8NEF3 MIR4280-201ENST00000582178 76 ntBASIC-1□□□□□ -2.57
CCDC112Q8NEF3 RNU6-170P-201ENST00000362832 104 ntBASIC-1.01□□□□□ -2.57
CCDC112Q8NEF3 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.01□□□□□ -2.57
CCDC112Q8NEF3 RNU6-900P-201ENST00000384498 102 ntBASIC-1.01□□□□□ -2.57
CCDC112Q8NEF3 ELOCP20-201ENST00000422460 345 ntBASIC-1.01□□□□□ -2.57
CCDC112Q8NEF3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.01□□□□□ -2.57
CCDC112Q8NEF3 RNY1P9-201ENST00000532431 109 ntBASIC-1.01□□□□□ -2.57
CCDC112Q8NEF3 MIR4460-201ENST00000577862 86 ntBASIC-1.01□□□□□ -2.57
CCDC112Q8NEF3 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.02□□□□□ -2.57
CCDC112Q8NEF3 RNU6-770P-201ENST00000363929 105 ntBASIC-1.02□□□□□ -2.57
CCDC112Q8NEF3 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.02□□□□□ -2.57
CCDC112Q8NEF3 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.02□□□□□ -2.57
CCDC112Q8NEF3 RNU6-450P-201ENST00000364654 107 ntBASIC-1.02□□□□□ -2.57
CCDC112Q8NEF3 SNORD115-44-201ENST00000365391 82 ntBASIC-1.02□□□□□ -2.57
CCDC112Q8NEF3 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.02□□□□□ -2.57
CCDC112Q8NEF3 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.02□□□□□ -2.57
CCDC112Q8NEF3 SNORD56B-201ENST00000384713 71 ntBASIC-1.02□□□□□ -2.57
CCDC112Q8NEF3 RNU6-651P-201ENST00000411040 105 ntBASIC-1.02□□□□□ -2.57
CCDC112Q8NEF3 AC138393.2-201ENST00000414742 246 ntBASIC-1.02□□□□□ -2.57
CCDC112Q8NEF3 FGF7P4-201ENST00000509595 295 ntBASIC-1.02□□□□□ -2.57
CCDC112Q8NEF3 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.03□□□□□ -2.57
CCDC112Q8NEF3 RNU6-806P-201ENST00000365147 105 ntBASIC-1.03□□□□□ -2.57
CCDC112Q8NEF3 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.03□□□□□ -2.57
CCDC112Q8NEF3 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.03□□□□□ -2.57
CCDC112Q8NEF3 AL445193.1-201ENST00000441183 141 ntBASIC-1.03□□□□□ -2.57
CCDC112Q8NEF3 AP001362.1-201ENST00000625165 124 ntBASIC-1.03□□□□□ -2.57
CCDC112Q8NEF3 Y_RNA.26-201ENST00000362539 101 ntBASIC-1.04□□□□□ -2.58
CCDC112Q8NEF3 MIR204-201ENST00000385200 110 ntBASIC-1.04□□□□□ -2.58
CCDC112Q8NEF3 MT-TY-201ENST00000387409 66 ntBASIC-1.04□□□□□ -2.58
CCDC112Q8NEF3 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.04□□□□□ -2.58
CCDC112Q8NEF3 SNORA40.15-201ENST00000516884 107 ntBASIC-1.04□□□□□ -2.58
CCDC112Q8NEF3 AC011603.4-201ENST00000611325 277 ntBASIC-1.04□□□□□ -2.58
CCDC112Q8NEF3 AL365265.1-201ENST00000621045 234 ntBASIC-1.04□□□□□ -2.58
CCDC112Q8NEF3 MIR20A-201ENST00000362279 71 ntBASIC-1.05□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.05□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.05□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.05□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.05□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.05□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.05□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.05□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.05□□□□□ -2.58
CCDC112Q8NEF3 MIR2113-201ENST00000459007 91 ntBASIC-1.05□□□□□ -2.58
CCDC112Q8NEF3 RNA5SP236-201ENST00000516169 116 ntBASIC-1.05□□□□□ -2.58
CCDC112Q8NEF3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.05□□□□□ -2.58
CCDC112Q8NEF3 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.05□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.05□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.05□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.05□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.06□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.06□□□□□ -2.58
CCDC112Q8NEF3 RNU6-571P-201ENST00000384128 107 ntBASIC-1.06□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.579-201ENST00000390939 94 ntBASIC-1.06□□□□□ -2.58
CCDC112Q8NEF3 RNU4-69P-201ENST00000410677 143 ntBASIC-1.06□□□□□ -2.58
CCDC112Q8NEF3 AC021146.6-201ENST00000514659 117 ntBASIC-1.06□□□□□ -2.58
CCDC112Q8NEF3 AP000676.1-201ENST00000533307 52 ntBASIC-1.06□□□□□ -2.58
CCDC112Q8NEF3 MIR6851-201ENST00000617060 67 ntBASIC-1.06□□□□□ -2.58
CCDC112Q8NEF3 AC090971.5-201ENST00000621102 293 ntBASIC-1.06□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 203.8 ms