Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC008163.1-202ENST00000636004 2889 ntBASIC1.53□□□□□ -2.16
VRK3Q8IV63 AC006160.2-201ENST00000637708 154 ntBASIC1.53□□□□□ -2.16
VRK3Q8IV63 RNU6-509P-201ENST00000363519 107 ntBASIC1.52□□□□□ -2.17
VRK3Q8IV63 Y_RNA.168-201ENST00000363740 102 ntBASIC1.52□□□□□ -2.17
VRK3Q8IV63 Y_RNA.338-201ENST00000365320 114 ntBASIC1.52□□□□□ -2.17
VRK3Q8IV63 Y_RNA.426-201ENST00000384068 113 ntBASIC1.52□□□□□ -2.17
VRK3Q8IV63 Y_RNA.609-201ENST00000410669 89 ntBASIC1.52□□□□□ -2.17
VRK3Q8IV63 Y_RNA.676-201ENST00000516393 96 ntBASIC1.52□□□□□ -2.17
VRK3Q8IV63 RNU11-2P-201ENST00000516898 142 ntBASIC1.52□□□□□ -2.17
VRK3Q8IV63 AC133485.1-201ENST00000567176 124 ntBASIC1.52□□□□□ -2.17
VRK3Q8IV63 MIR6740-201ENST00000618268 113 ntBASIC1.52□□□□□ -2.17
VRK3Q8IV63 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VRK3Q8IV63 Y_RNA.4-201ENST00000362333 112 ntBASIC1.51□□□□□ -2.17
VRK3Q8IV63 RNA5SP133-201ENST00000363368 119 ntBASIC1.51□□□□□ -2.17
VRK3Q8IV63 RNU6-1125P-201ENST00000363601 107 ntBASIC1.51□□□□□ -2.17
VRK3Q8IV63 RNU6-480P-201ENST00000384332 107 ntBASIC1.51□□□□□ -2.17
VRK3Q8IV63 MIR181B2-201ENST00000385004 89 ntBASIC1.51□□□□□ -2.17
VRK3Q8IV63 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
VRK3Q8IV63 RNA5SP225-201ENST00000410874 135 ntBASIC1.51□□□□□ -2.17
VRK3Q8IV63 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.51□□□□□ -2.17
VRK3Q8IV63 MIR2115-201ENST00000516657 100 ntBASIC1.51□□□□□ -2.17
VRK3Q8IV63 MTND5P40-201ENST00000559945 246 ntBASIC1.51□□□□□ -2.17
VRK3Q8IV63 AC138749.4-201ENST00000563970 127 ntBASIC1.51□□□□□ -2.17
VRK3Q8IV63 AP000753.3-201ENST00000604083 169 ntBASIC1.51□□□□□ -2.17
VRK3Q8IV63 AL645939.4-201ENST00000604495 135 ntBASIC1.51□□□□□ -2.17
VRK3Q8IV63 BX248123.2-201ENST00000606318 124 ntBASIC1.51□□□□□ -2.17
VRK3Q8IV63 MIR548BB-201ENST00000626714 66 ntBASIC1.51□□□□□ -2.17
VRK3Q8IV63 MIR6516-201ENST00000630554 81 ntBASIC1.51□□□□□ -2.17
VRK3Q8IV63 AP000648.3-201ENST00000623539 4507 ntBASIC1.5□□□□□ -2.17
VRK3Q8IV63 RNU6-580P-201ENST00000365159 107 ntBASIC1.5□□□□□ -2.17
VRK3Q8IV63 RNU6-279P-201ENST00000391297 101 ntBASIC1.5□□□□□ -2.17
VRK3Q8IV63 MIR1185-1-201ENST00000408598 86 ntBASIC1.5□□□□□ -2.17
VRK3Q8IV63 AC027119.1-201ENST00000440877 241 ntBASIC1.5□□□□□ -2.17
VRK3Q8IV63 SNRPGP12-201ENST00000449481 213 ntBASIC1.5□□□□□ -2.17
VRK3Q8IV63 RPL30P7-201ENST00000479312 323 ntBASIC1.5□□□□□ -2.17
VRK3Q8IV63 MIR4303-201ENST00000581299 66 ntBASIC1.5□□□□□ -2.17
VRK3Q8IV63 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.5□□□□□ -2.17
VRK3Q8IV63 SNORA4-201ENST00000584302 138 ntBASIC1.5□□□□□ -2.17
VRK3Q8IV63 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.5□□□□□ -2.17
VRK3Q8IV63 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
VRK3Q8IV63 MIR377-201ENST00000362145 69 ntBASIC1.49□□□□□ -2.17
VRK3Q8IV63 SNORA25.3-201ENST00000363205 127 ntBASIC1.49□□□□□ -2.17
VRK3Q8IV63 Y_RNA.191-201ENST00000363972 113 ntBASIC1.49□□□□□ -2.17
VRK3Q8IV63 Y_RNA.313-201ENST00000365095 103 ntBASIC1.49□□□□□ -2.17
VRK3Q8IV63 RNU6-1165P-201ENST00000410119 107 ntBASIC1.49□□□□□ -2.17
VRK3Q8IV63 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.49□□□□□ -2.17
VRK3Q8IV63 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VRK3Q8IV63 RNA5SP264-201ENST00000363115 107 ntBASIC1.48□□□□□ -2.17
VRK3Q8IV63 Y_RNA.164-201ENST00000363709 102 ntBASIC1.48□□□□□ -2.17
VRK3Q8IV63 RNU1-42P-201ENST00000364033 160 ntBASIC1.48□□□□□ -2.17
VRK3Q8IV63 AC090897.1-201ENST00000580909 226 ntBASIC1.48□□□□□ -2.17
VRK3Q8IV63 SNORD115-27-201ENST00000364430 82 ntBASIC1.47□□□□□ -2.17
VRK3Q8IV63 Y_RNA.437-201ENST00000384113 113 ntBASIC1.47□□□□□ -2.17
VRK3Q8IV63 MIR320A-201ENST00000385302 82 ntBASIC1.47□□□□□ -2.17
VRK3Q8IV63 MT-TF-201ENST00000387314 71 ntBASIC1.47□□□□□ -2.17
VRK3Q8IV63 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
VRK3Q8IV63 Y_RNA.607-201ENST00000410597 98 ntBASIC1.47□□□□□ -2.17
VRK3Q8IV63 Y_RNA.611-201ENST00000410682 108 ntBASIC1.47□□□□□ -2.17
VRK3Q8IV63 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.47□□□□□ -2.17
VRK3Q8IV63 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.47□□□□□ -2.17
VRK3Q8IV63 Y_RNA.119-201ENST00000363301 96 ntBASIC1.46□□□□□ -2.18
VRK3Q8IV63 SNORD1A-201ENST00000364968 72 ntBASIC1.46□□□□□ -2.18
VRK3Q8IV63 RNU6-571P-201ENST00000384128 107 ntBASIC1.46□□□□□ -2.18
VRK3Q8IV63 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.46□□□□□ -2.18
VRK3Q8IV63 RNU4-83P-201ENST00000410863 133 ntBASIC1.46□□□□□ -2.18
VRK3Q8IV63 AC087499.7-201ENST00000441958 109 ntBASIC1.46□□□□□ -2.18
VRK3Q8IV63 RNU6-850P-201ENST00000516934 103 ntBASIC1.46□□□□□ -2.18
VRK3Q8IV63 SNORD53B-201ENST00000577887 78 ntBASIC1.46□□□□□ -2.18
VRK3Q8IV63 MIR4500-201ENST00000579472 76 ntBASIC1.46□□□□□ -2.18
VRK3Q8IV63 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.46□□□□□ -2.18
VRK3Q8IV63 uc_338.6-201ENST00000613544 171 ntBASIC1.46□□□□□ -2.18
VRK3Q8IV63 MIR8066-201ENST00000617280 78 ntBASIC1.46□□□□□ -2.18
VRK3Q8IV63 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.46□□□□□ -2.18
VRK3Q8IV63 MIR517C-201ENST00000385103 95 ntBASIC1.45□□□□□ -2.18
VRK3Q8IV63 RNU6-205P-201ENST00000390858 107 ntBASIC1.45□□□□□ -2.18
VRK3Q8IV63 AL354695.1-201ENST00000427935 228 ntBASIC1.45□□□□□ -2.18
VRK3Q8IV63 AC108667.1-201ENST00000428618 249 ntBASIC1.45□□□□□ -2.18
VRK3Q8IV63 AC245517.4-201ENST00000448601 281 ntBASIC1.45□□□□□ -2.18
VRK3Q8IV63 RNU7-62P-201ENST00000458856 62 ntBASIC1.45□□□□□ -2.18
VRK3Q8IV63 snoU13.9-201ENST00000458927 103 ntBASIC1.45□□□□□ -2.18
VRK3Q8IV63 MIR3664-201ENST00000579074 99 ntBASIC1.45□□□□□ -2.18
VRK3Q8IV63 SNORD33-201ENST00000362761 85 ntBASIC1.44□□□□□ -2.18
VRK3Q8IV63 RNU6-524P-201ENST00000384270 107 ntBASIC1.44□□□□□ -2.18
VRK3Q8IV63 RNU6-24P-201ENST00000384440 107 ntBASIC1.44□□□□□ -2.18
VRK3Q8IV63 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
VRK3Q8IV63 SNORA67.5-201ENST00000391036 107 ntBASIC1.44□□□□□ -2.18
VRK3Q8IV63 SNORA67.6-201ENST00000391093 99 ntBASIC1.44□□□□□ -2.18
VRK3Q8IV63 MIR18B-201ENST00000454574 71 ntBASIC1.44□□□□□ -2.18
VRK3Q8IV63 AC005908.1-201ENST00000468701 347 ntBASIC1.44□□□□□ -2.18
VRK3Q8IV63 AC093729.1-201ENST00000513074 128 ntBASIC1.44□□□□□ -2.18
VRK3Q8IV63 RNU6-947P-201ENST00000516264 106 ntBASIC1.44□□□□□ -2.18
VRK3Q8IV63 SNORA44.1-201ENST00000517031 108 ntBASIC1.44□□□□□ -2.18
VRK3Q8IV63 AL512598.1-201ENST00000610158 273 ntBASIC1.44□□□□□ -2.18
VRK3Q8IV63 U6.109-201ENST00000636749 87 ntBASIC1.44□□□□□ -2.18
VRK3Q8IV63 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
VRK3Q8IV63 RNU6-654P-201ENST00000364373 107 ntBASIC1.43□□□□□ -2.18
VRK3Q8IV63 MIR519C-201ENST00000385053 87 ntBASIC1.43□□□□□ -2.18
VRK3Q8IV63 MIR30A-201ENST00000385092 71 ntBASIC1.43□□□□□ -2.18
VRK3Q8IV63 Y_RNA.588-201ENST00000391254 102 ntBASIC1.43□□□□□ -2.18
VRK3Q8IV63 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 317 ms