Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RNU6-1237P-201ENST00000384777 107 ntBASIC1.89□□□□□ -2.11
USP48Q86UV5 MIR34C-201ENST00000384831 77 ntBASIC1.89□□□□□ -2.11
USP48Q86UV5 MT-TN-201ENST00000387400 73 ntBASIC1.89□□□□□ -2.11
USP48Q86UV5 RNU6-1321P-201ENST00000390905 107 ntBASIC1.89□□□□□ -2.11
USP48Q86UV5 AC048334.1-201ENST00000477975 159 ntBASIC1.89□□□□□ -2.11
USP48Q86UV5 SNORA31.2-201ENST00000516019 134 ntBASIC1.89□□□□□ -2.11
USP48Q86UV5 RNA5SP220-201ENST00000516298 104 ntBASIC1.89□□□□□ -2.11
USP48Q86UV5 MIR4264-201ENST00000583520 66 ntBASIC1.89□□□□□ -2.11
USP48Q86UV5 U7.3-201ENST00000616123 62 ntBASIC1.89□□□□□ -2.11
USP48Q86UV5 AC105081.1-201ENST00000617727 106 ntBASIC1.89□□□□□ -2.11
USP48Q86UV5 AL512310.12-203ENST00000640543 90 ntBASIC1.89□□□□□ -2.11
USP48Q86UV5 AC109327.2-201ENST00000448339 378 ntBASIC1.88□□□□□ -2.11
USP48Q86UV5 RNU6-162P-201ENST00000516228 103 ntBASIC1.88□□□□□ -2.11
USP48Q86UV5 AC026421.1-201ENST00000519101 163 ntBASIC1.88□□□□□ -2.11
USP48Q86UV5 MIR376B-201ENST00000614515 100 ntBASIC1.88□□□□□ -2.11
USP48Q86UV5 Y_RNA.190-201ENST00000363964 101 ntBASIC1.87□□□□□ -2.11
USP48Q86UV5 RNU6-1163P-201ENST00000364516 107 ntBASIC1.87□□□□□ -2.11
USP48Q86UV5 RNA5SP173-201ENST00000364857 136 ntBASIC1.87□□□□□ -2.11
USP48Q86UV5 RNU6-53P-201ENST00000365367 106 ntBASIC1.87□□□□□ -2.11
USP48Q86UV5 MIR1323-201ENST00000408090 73 ntBASIC1.87□□□□□ -2.11
USP48Q86UV5 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.87□□□□□ -2.11
USP48Q86UV5 AC141846.1-201ENST00000568348 142 ntBASIC1.87□□□□□ -2.11
USP48Q86UV5 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.87□□□□□ -2.11
USP48Q86UV5 MIR6516-201ENST00000630554 81 ntBASIC1.87□□□□□ -2.11
USP48Q86UV5 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.87□□□□□ -2.11
USP48Q86UV5 SNORD114-10-201ENST00000363409 72 ntBASIC1.86□□□□□ -2.11
USP48Q86UV5 SNORD45B-201ENST00000364617 72 ntBASIC1.86□□□□□ -2.11
USP48Q86UV5 Y_RNA.448-201ENST00000384185 108 ntBASIC1.86□□□□□ -2.11
USP48Q86UV5 RNU6-613P-201ENST00000410412 108 ntBASIC1.86□□□□□ -2.11
USP48Q86UV5 RNA5SP480-201ENST00000516840 109 ntBASIC1.86□□□□□ -2.11
USP48Q86UV5 SEPT14P17-201ENST00000617978 177 ntBASIC1.86□□□□□ -2.11
USP48Q86UV5 MIR563-201ENST00000385080 79 ntBASIC1.85□□□□□ -2.11
USP48Q86UV5 MIR517C-201ENST00000385103 95 ntBASIC1.85□□□□□ -2.11
USP48Q86UV5 RNU6-592P-201ENST00000411333 103 ntBASIC1.85□□□□□ -2.11
USP48Q86UV5 snoU13.2-201ENST00000459201 104 ntBASIC1.85□□□□□ -2.11
USP48Q86UV5 Y_RNA.659-201ENST00000515994 113 ntBASIC1.85□□□□□ -2.11
USP48Q86UV5 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.85□□□□□ -2.11
USP48Q86UV5 MIR377-201ENST00000362145 69 ntBASIC1.84□□□□□ -2.11
USP48Q86UV5 Y_RNA.593-201ENST00000410292 98 ntBASIC1.84□□□□□ -2.11
USP48Q86UV5 RNA5SP237-201ENST00000410414 113 ntBASIC1.84□□□□□ -2.11
USP48Q86UV5 AL662814.1-201ENST00000617364 121 ntBASIC1.84□□□□□ -2.11
USP48Q86UV5 MIR6740-201ENST00000618268 113 ntBASIC1.84□□□□□ -2.11
USP48Q86UV5 AL353770.2-201ENST00000620024 78 ntBASIC1.84□□□□□ -2.11
USP48Q86UV5 MIR494-201ENST00000349529 81 ntBASIC1.83□□□□□ -2.12
USP48Q86UV5 RNU6-86P-201ENST00000606534 107 ntBASIC1.83□□□□□ -2.12
USP48Q86UV5 uc_338.6-201ENST00000613544 171 ntBASIC1.83□□□□□ -2.12
USP48Q86UV5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
USP48Q86UV5 Y_RNA.17-201ENST00000362433 111 ntBASIC1.82□□□□□ -2.12
USP48Q86UV5 SNORD38.1-201ENST00000363863 68 ntBASIC1.82□□□□□ -2.12
USP48Q86UV5 MIR588-201ENST00000384900 83 ntBASIC1.82□□□□□ -2.12
USP48Q86UV5 RNU6-205P-201ENST00000390858 107 ntBASIC1.82□□□□□ -2.12
USP48Q86UV5 SNORA31.24-201ENST00000517232 57 ntBASIC1.82□□□□□ -2.12
USP48Q86UV5 AC020891.4-201ENST00000605745 93 ntBASIC1.82□□□□□ -2.12
USP48Q86UV5 MIR30D-201ENST00000362283 70 ntBASIC1.81□□□□□ -2.12
USP48Q86UV5 MIR96-201ENST00000362288 78 ntBASIC1.81□□□□□ -2.12
USP48Q86UV5 RNU6-654P-201ENST00000364373 107 ntBASIC1.81□□□□□ -2.12
USP48Q86UV5 RNU6-949P-201ENST00000384040 107 ntBASIC1.81□□□□□ -2.12
USP48Q86UV5 MIR320A-201ENST00000385302 82 ntBASIC1.81□□□□□ -2.12
USP48Q86UV5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.81□□□□□ -2.12
USP48Q86UV5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.81□□□□□ -2.12
USP48Q86UV5 RNU7-62P-201ENST00000458856 62 ntBASIC1.81□□□□□ -2.12
USP48Q86UV5 MIR4439-201ENST00000583746 80 ntBASIC1.81□□□□□ -2.12
USP48Q86UV5 MIR1245B-201ENST00000636115 69 ntBASIC1.81□□□□□ -2.12
USP48Q86UV5 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
USP48Q86UV5 RNU6-1134P-201ENST00000365156 101 ntBASIC1.8□□□□□ -2.12
USP48Q86UV5 RNU6-813P-201ENST00000384691 107 ntBASIC1.8□□□□□ -2.12
USP48Q86UV5 AL591704.2-201ENST00000421658 181 ntBASIC1.8□□□□□ -2.12
USP48Q86UV5 RNU7-48P-201ENST00000458875 63 ntBASIC1.8□□□□□ -2.12
USP48Q86UV5 Y_RNA.705-201ENST00000516862 110 ntBASIC1.8□□□□□ -2.12
USP48Q86UV5 AC096720.1-201ENST00000604441 183 ntBASIC1.8□□□□□ -2.12
USP48Q86UV5 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.8□□□□□ -2.12
USP48Q86UV5 Y_RNA.173-201ENST00000363776 113 ntBASIC1.79□□□□□ -2.12
USP48Q86UV5 Y_RNA.330-201ENST00000365230 109 ntBASIC1.79□□□□□ -2.12
USP48Q86UV5 SNORD58A-201ENST00000383875 65 ntBASIC1.79□□□□□ -2.12
USP48Q86UV5 SNORA80D-201ENST00000384488 135 ntBASIC1.79□□□□□ -2.12
USP48Q86UV5 MIR450A2-201ENST00000385022 100 ntBASIC1.79□□□□□ -2.12
USP48Q86UV5 RNU6-910P-201ENST00000390844 107 ntBASIC1.79□□□□□ -2.12
USP48Q86UV5 U8.15-201ENST00000390947 134 ntBASIC1.79□□□□□ -2.12
USP48Q86UV5 SNORA75.2-201ENST00000391138 150 ntBASIC1.79□□□□□ -2.12
USP48Q86UV5 SNORA75.3-201ENST00000391231 150 ntBASIC1.79□□□□□ -2.12
USP48Q86UV5 RNU6-887P-201ENST00000410660 100 ntBASIC1.79□□□□□ -2.12
USP48Q86UV5 Y_RNA.98-201ENST00000363109 102 ntBASIC1.78□□□□□ -2.12
USP48Q86UV5 Y_RNA.363-201ENST00000365529 113 ntBASIC1.78□□□□□ -2.12
USP48Q86UV5 RNU6-1152P-201ENST00000384576 107 ntBASIC1.78□□□□□ -2.12
USP48Q86UV5 RNU6-447P-201ENST00000410293 104 ntBASIC1.78□□□□□ -2.12
USP48Q86UV5 RNA5SP95-201ENST00000410319 137 ntBASIC1.78□□□□□ -2.12
USP48Q86UV5 RNU6-1118P-201ENST00000410382 104 ntBASIC1.78□□□□□ -2.12
USP48Q86UV5 RNU6-1076P-201ENST00000410397 104 ntBASIC1.78□□□□□ -2.12
USP48Q86UV5 RNU6-355P-201ENST00000410427 104 ntBASIC1.78□□□□□ -2.12
USP48Q86UV5 RNU6-791P-201ENST00000410467 104 ntBASIC1.78□□□□□ -2.12
USP48Q86UV5 RNU6-705P-201ENST00000410601 104 ntBASIC1.78□□□□□ -2.12
USP48Q86UV5 RNU6-1100P-201ENST00000410691 104 ntBASIC1.78□□□□□ -2.12
USP48Q86UV5 RNU6-860P-201ENST00000410860 104 ntBASIC1.78□□□□□ -2.12
USP48Q86UV5 RNU6-1217P-201ENST00000411276 104 ntBASIC1.78□□□□□ -2.12
USP48Q86UV5 RNU6-785P-201ENST00000411324 104 ntBASIC1.78□□□□□ -2.12
USP48Q86UV5 AL354695.1-201ENST00000427935 228 ntBASIC1.78□□□□□ -2.12
USP48Q86UV5 RN7SKP12-201ENST00000516275 143 ntBASIC1.78□□□□□ -2.12
USP48Q86UV5 AC103810.7-201ENST00000607821 91 ntBASIC1.78□□□□□ -2.12
USP48Q86UV5 U6.90-201ENST00000614007 104 ntBASIC1.78□□□□□ -2.12
USP48Q86UV5 U6.70-201ENST00000620287 104 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms