Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.61□□□□□ -1.99
SH3RF1Q7Z6J0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SH3RF1Q7Z6J0 Y_RNA.36-201ENST00000362602 112 ntBASIC2.6□□□□□ -1.99
SH3RF1Q7Z6J0 SNORA67.3-201ENST00000384366 140 ntBASIC2.6□□□□□ -1.99
SH3RF1Q7Z6J0 SNORD90-201ENST00000391145 111 ntBASIC2.6□□□□□ -1.99
SH3RF1Q7Z6J0 RNU6-922P-201ENST00000516753 99 ntBASIC2.6□□□□□ -1.99
SH3RF1Q7Z6J0 MIR4264-201ENST00000583520 66 ntBASIC2.6□□□□□ -1.99
SH3RF1Q7Z6J0 SNORD92-201ENST00000585078 85 ntBASIC2.6□□□□□ -1.99
SH3RF1Q7Z6J0 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.6□□□□□ -1.99
SH3RF1Q7Z6J0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SH3RF1Q7Z6J0 RNA5SP393-201ENST00000363423 117 ntBASIC2.59□□□□□ -1.99
SH3RF1Q7Z6J0 MIR9-2-201ENST00000384838 87 ntBASIC2.59□□□□□ -1.99
SH3RF1Q7Z6J0 RNU6-1254P-201ENST00000391266 104 ntBASIC2.59□□□□□ -1.99
SH3RF1Q7Z6J0 MIR942-201ENST00000401111 86 ntBASIC2.59□□□□□ -1.99
SH3RF1Q7Z6J0 RNU7-193P-201ENST00000516723 65 ntBASIC2.59□□□□□ -1.99
SH3RF1Q7Z6J0 AC121758.2-201ENST00000553271 193 ntBASIC2.59□□□□□ -1.99
SH3RF1Q7Z6J0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.59□□□□□ -1.99
SH3RF1Q7Z6J0 MIR6766-201ENST00000622641 72 ntBASIC2.59□□□□□ -1.99
SH3RF1Q7Z6J0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.58□□□□□ -2
SH3RF1Q7Z6J0 AC080100.1-201ENST00000624239 5356 ntBASIC2.58□□□□□ -2
SH3RF1Q7Z6J0 MIR563-201ENST00000385080 79 ntBASIC2.58□□□□□ -2
SH3RF1Q7Z6J0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
SH3RF1Q7Z6J0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SH3RF1Q7Z6J0 SNORA8.1-201ENST00000384250 140 ntBASIC2.57□□□□□ -2
SH3RF1Q7Z6J0 MIR516A2-201ENST00000384888 90 ntBASIC2.57□□□□□ -2
SH3RF1Q7Z6J0 MIR516A1-201ENST00000385033 90 ntBASIC2.57□□□□□ -2
SH3RF1Q7Z6J0 MIR518E-201ENST00000385252 88 ntBASIC2.57□□□□□ -2
SH3RF1Q7Z6J0 RNU6-243P-201ENST00000391140 107 ntBASIC2.57□□□□□ -2
SH3RF1Q7Z6J0 RNU6-1165P-201ENST00000410119 107 ntBASIC2.57□□□□□ -2
SH3RF1Q7Z6J0 RNU6-141P-201ENST00000410499 105 ntBASIC2.57□□□□□ -2
SH3RF1Q7Z6J0 AC244636.1-201ENST00000421152 228 ntBASIC2.57□□□□□ -2
SH3RF1Q7Z6J0 JTBP1-201ENST00000441314 247 ntBASIC2.57□□□□□ -2
SH3RF1Q7Z6J0 RNU7-62P-201ENST00000458856 62 ntBASIC2.57□□□□□ -2
SH3RF1Q7Z6J0 MIR4446-201ENST00000578505 67 ntBASIC2.57□□□□□ -2
SH3RF1Q7Z6J0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SH3RF1Q7Z6J0 MIRLET7F1-201ENST00000362202 87 ntBASIC2.56□□□□□ -2
SH3RF1Q7Z6J0 RNU6-330P-201ENST00000363015 107 ntBASIC2.56□□□□□ -2
SH3RF1Q7Z6J0 RNU6-53P-201ENST00000365367 106 ntBASIC2.56□□□□□ -2
SH3RF1Q7Z6J0 SNORD41-201ENST00000386967 70 ntBASIC2.56□□□□□ -2
SH3RF1Q7Z6J0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.56□□□□□ -2
SH3RF1Q7Z6J0 RNU6-205P-201ENST00000390858 107 ntBASIC2.56□□□□□ -2
SH3RF1Q7Z6J0 RPL23AP42-201ENST00000471152 471 ntBASIC2.56□□□□□ -2
SH3RF1Q7Z6J0 MIR2115-201ENST00000516657 100 ntBASIC2.56□□□□□ -2
SH3RF1Q7Z6J0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.56□□□□□ -2
SH3RF1Q7Z6J0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.56□□□□□ -2
SH3RF1Q7Z6J0 MIR6740-201ENST00000618268 113 ntBASIC2.56□□□□□ -2
SH3RF1Q7Z6J0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.56□□□□□ -2
SH3RF1Q7Z6J0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
SH3RF1Q7Z6J0 RNU6-154P-201ENST00000384306 106 ntBASIC2.55□□□□□ -2
SH3RF1Q7Z6J0 MT-TF-201ENST00000387314 71 ntBASIC2.55□□□□□ -2
SH3RF1Q7Z6J0 RNU6-466P-201ENST00000391224 103 ntBASIC2.55□□□□□ -2
SH3RF1Q7Z6J0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.55□□□□□ -2
SH3RF1Q7Z6J0 SNORD23.1-201ENST00000408212 104 ntBASIC2.55□□□□□ -2
SH3RF1Q7Z6J0 snoU13.17-201ENST00000458802 104 ntBASIC2.55□□□□□ -2
SH3RF1Q7Z6J0 AC104435.1-201ENST00000483483 166 ntBASIC2.55□□□□□ -2
SH3RF1Q7Z6J0 MIR3192-201ENST00000584920 77 ntBASIC2.55□□□□□ -2
SH3RF1Q7Z6J0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SH3RF1Q7Z6J0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SH3RF1Q7Z6J0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SH3RF1Q7Z6J0 SNORA25.3-201ENST00000363205 127 ntBASIC2.54□□□□□ -2
SH3RF1Q7Z6J0 AP000942.3-201ENST00000603702 160 ntBASIC2.54□□□□□ -2
SH3RF1Q7Z6J0 GHRLOS.1-201ENST00000610995 70 ntBASIC2.54□□□□□ -2
SH3RF1Q7Z6J0 FO624990.1-201ENST00000636373 85 ntBASIC2.54□□□□□ -2
SH3RF1Q7Z6J0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
SH3RF1Q7Z6J0 Y_RNA.226-201ENST00000364337 114 ntBASIC2.53□□□□□ -2
SH3RF1Q7Z6J0 MT-TN-201ENST00000387400 73 ntBASIC2.53□□□□□ -2
SH3RF1Q7Z6J0 AC245517.4-201ENST00000448601 281 ntBASIC2.53□□□□□ -2
SH3RF1Q7Z6J0 SNORA31.11-201ENST00000516528 139 ntBASIC2.53□□□□□ -2
SH3RF1Q7Z6J0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.53□□□□□ -2
SH3RF1Q7Z6J0 Z82195.2-201ENST00000612348 18351 ntBASIC2.53□□□□□ -2
SH3RF1Q7Z6J0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SH3RF1Q7Z6J0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SH3RF1Q7Z6J0 MIR30D-201ENST00000362283 70 ntBASIC2.52□□□□□ -2.01
SH3RF1Q7Z6J0 Y_RNA.42-201ENST00000362660 108 ntBASIC2.52□□□□□ -2.01
SH3RF1Q7Z6J0 RNU6-291P-201ENST00000384720 107 ntBASIC2.52□□□□□ -2.01
SH3RF1Q7Z6J0 RNU6-630P-201ENST00000391258 106 ntBASIC2.52□□□□□ -2.01
SH3RF1Q7Z6J0 AL161935.2-201ENST00000414627 60 ntBASIC2.52□□□□□ -2.01
SH3RF1Q7Z6J0 RNU2-19P-201ENST00000517288 84 ntBASIC2.52□□□□□ -2.01
SH3RF1Q7Z6J0 MIR5002-201ENST00000584713 97 ntBASIC2.52□□□□□ -2.01
SH3RF1Q7Z6J0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SH3RF1Q7Z6J0 AL161722.3-201ENST00000605789 2983 ntBASIC2.52□□□□□ -2.01
SH3RF1Q7Z6J0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.51□□□□□ -2.01
SH3RF1Q7Z6J0 RNU6-957P-201ENST00000363652 99 ntBASIC2.51□□□□□ -2.01
SH3RF1Q7Z6J0 SNORA25.4-201ENST00000363666 124 ntBASIC2.51□□□□□ -2.01
SH3RF1Q7Z6J0 MIR221-201ENST00000385135 110 ntBASIC2.51□□□□□ -2.01
SH3RF1Q7Z6J0 U8.13-201ENST00000390842 128 ntBASIC2.51□□□□□ -2.01
SH3RF1Q7Z6J0 RNA5SP212-201ENST00000391223 107 ntBASIC2.51□□□□□ -2.01
SH3RF1Q7Z6J0 MIR1302-7-201ENST00000408841 72 ntBASIC2.51□□□□□ -2.01
SH3RF1Q7Z6J0 RNU7-106P-201ENST00000459514 67 ntBASIC2.51□□□□□ -2.01
SH3RF1Q7Z6J0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.51□□□□□ -2.01
SH3RF1Q7Z6J0 RN7SL274P-201ENST00000492268 272 ntBASIC2.51□□□□□ -2.01
SH3RF1Q7Z6J0 RNU6-947P-201ENST00000516264 106 ntBASIC2.51□□□□□ -2.01
SH3RF1Q7Z6J0 RNU6-295P-201ENST00000516901 104 ntBASIC2.51□□□□□ -2.01
SH3RF1Q7Z6J0 RNU1-17P-201ENST00000363022 152 ntBASIC2.5□□□□□ -2.01
SH3RF1Q7Z6J0 RNU4-58P-201ENST00000363192 141 ntBASIC2.5□□□□□ -2.01
SH3RF1Q7Z6J0 RNU6-340P-201ENST00000364005 107 ntBASIC2.5□□□□□ -2.01
SH3RF1Q7Z6J0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SH3RF1Q7Z6J0 Y_RNA.443-201ENST00000384135 111 ntBASIC2.49□□□□□ -2.01
SH3RF1Q7Z6J0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SH3RF1Q7Z6J0 AC055731.1-201ENST00000474387 401 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 261.2 ms