Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AL157834.3-201ENST00000615543 103 ntBASIC1.67□□□□□ -2.14
RUFY4Q6ZNE9 AP001362.1-201ENST00000625165 124 ntBASIC1.67□□□□□ -2.14
RUFY4Q6ZNE9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RUFY4Q6ZNE9 Y_RNA.96-201ENST00000363092 109 ntBASIC1.66□□□□□ -2.14
RUFY4Q6ZNE9 SNORD38.1-201ENST00000363863 68 ntBASIC1.66□□□□□ -2.14
RUFY4Q6ZNE9 SNORD45B-201ENST00000364617 72 ntBASIC1.66□□□□□ -2.14
RUFY4Q6ZNE9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.66□□□□□ -2.14
RUFY4Q6ZNE9 Y_RNA.363-201ENST00000365529 113 ntBASIC1.66□□□□□ -2.14
RUFY4Q6ZNE9 RNU6-910P-201ENST00000390844 107 ntBASIC1.66□□□□□ -2.14
RUFY4Q6ZNE9 MIR1276-201ENST00000408707 83 ntBASIC1.66□□□□□ -2.14
RUFY4Q6ZNE9 RNU7-90P-201ENST00000459216 62 ntBASIC1.66□□□□□ -2.14
RUFY4Q6ZNE9 SNORD79.1-201ENST00000516069 84 ntBASIC1.66□□□□□ -2.14
RUFY4Q6ZNE9 AC036111.3-201ENST00000526389 112 ntBASIC1.66□□□□□ -2.14
RUFY4Q6ZNE9 AC106800.4-201ENST00000614905 153 ntBASIC1.66□□□□□ -2.14
RUFY4Q6ZNE9 MIR489-201ENST00000384923 84 ntBASIC1.65□□□□□ -2.15
RUFY4Q6ZNE9 AL354695.1-201ENST00000427935 228 ntBASIC1.65□□□□□ -2.15
RUFY4Q6ZNE9 SNORA70.22-201ENST00000517160 124 ntBASIC1.65□□□□□ -2.15
RUFY4Q6ZNE9 AC105081.1-201ENST00000617727 106 ntBASIC1.65□□□□□ -2.15
RUFY4Q6ZNE9 Y_RNA.191-201ENST00000363972 113 ntBASIC1.64□□□□□ -2.15
RUFY4Q6ZNE9 Y_RNA.348-201ENST00000365403 103 ntBASIC1.64□□□□□ -2.15
RUFY4Q6ZNE9 U8.15-201ENST00000390947 134 ntBASIC1.64□□□□□ -2.15
RUFY4Q6ZNE9 RNU6-1307P-201ENST00000391012 103 ntBASIC1.64□□□□□ -2.15
RUFY4Q6ZNE9 RNA5SP95-201ENST00000410319 137 ntBASIC1.64□□□□□ -2.15
RUFY4Q6ZNE9 SNORA19.1-201ENST00000410656 129 ntBASIC1.64□□□□□ -2.15
RUFY4Q6ZNE9 RPS29P28-201ENST00000446439 141 ntBASIC1.64□□□□□ -2.15
RUFY4Q6ZNE9 AC023790.1-201ENST00000482174 347 ntBASIC1.64□□□□□ -2.15
RUFY4Q6ZNE9 UBL5P1-201ENST00000507979 193 ntBASIC1.64□□□□□ -2.15
RUFY4Q6ZNE9 RNU6-1006P-201ENST00000516998 103 ntBASIC1.64□□□□□ -2.15
RUFY4Q6ZNE9 MIR4421-201ENST00000578133 69 ntBASIC1.64□□□□□ -2.15
RUFY4Q6ZNE9 MIR376B-201ENST00000614515 100 ntBASIC1.64□□□□□ -2.15
RUFY4Q6ZNE9 AC008163.1-202ENST00000636004 2889 ntBASIC1.64□□□□□ -2.15
RUFY4Q6ZNE9 Y_RNA.107-201ENST00000363190 121 ntBASIC1.63□□□□□ -2.15
RUFY4Q6ZNE9 RNU6-42P-201ENST00000384165 107 ntBASIC1.63□□□□□ -2.15
RUFY4Q6ZNE9 MIR34C-201ENST00000384831 77 ntBASIC1.63□□□□□ -2.15
RUFY4Q6ZNE9 RNU6-970P-201ENST00000516312 107 ntBASIC1.63□□□□□ -2.15
RUFY4Q6ZNE9 AL078603.1-201ENST00000603824 313 ntBASIC1.63□□□□□ -2.15
RUFY4Q6ZNE9 MIR1304-201ENST00000408243 91 ntBASIC1.62□□□□□ -2.15
RUFY4Q6ZNE9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.62□□□□□ -2.15
RUFY4Q6ZNE9 uc_338.6-201ENST00000613544 171 ntBASIC1.62□□□□□ -2.15
RUFY4Q6ZNE9 MIR320A-201ENST00000385302 82 ntBASIC1.61□□□□□ -2.15
RUFY4Q6ZNE9 MTATP8P2-201ENST00000435212 202 ntBASIC1.61□□□□□ -2.15
RUFY4Q6ZNE9 RNA5SP220-201ENST00000516298 104 ntBASIC1.61□□□□□ -2.15
RUFY4Q6ZNE9 MIR4452-201ENST00000583004 71 ntBASIC1.61□□□□□ -2.15
RUFY4Q6ZNE9 AL353770.2-201ENST00000620024 78 ntBASIC1.61□□□□□ -2.15
RUFY4Q6ZNE9 HSBP1P2-201ENST00000299671 229 ntBASIC1.6□□□□□ -2.15
RUFY4Q6ZNE9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.6□□□□□ -2.15
RUFY4Q6ZNE9 AC004941.2-201ENST00000427009 228 ntBASIC1.6□□□□□ -2.15
RUFY4Q6ZNE9 RNU1-123P-201ENST00000458950 160 ntBASIC1.6□□□□□ -2.15
RUFY4Q6ZNE9 Y_RNA.659-201ENST00000515994 113 ntBASIC1.6□□□□□ -2.15
RUFY4Q6ZNE9 RNU6-109P-201ENST00000516364 107 ntBASIC1.6□□□□□ -2.15
RUFY4Q6ZNE9 RNU6-184P-201ENST00000516514 107 ntBASIC1.6□□□□□ -2.15
RUFY4Q6ZNE9 AC138749.4-201ENST00000563970 127 ntBASIC1.6□□□□□ -2.15
RUFY4Q6ZNE9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
RUFY4Q6ZNE9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
RUFY4Q6ZNE9 RNU6-170P-201ENST00000362832 104 ntBASIC1.59□□□□□ -2.15
RUFY4Q6ZNE9 Y_RNA.95-201ENST00000363079 95 ntBASIC1.59□□□□□ -2.15
RUFY4Q6ZNE9 RNU6-934P-201ENST00000365154 107 ntBASIC1.59□□□□□ -2.15
RUFY4Q6ZNE9 RNU6-905P-201ENST00000384434 107 ntBASIC1.59□□□□□ -2.15
RUFY4Q6ZNE9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RUFY4Q6ZNE9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.59□□□□□ -2.15
RUFY4Q6ZNE9 RNU6-90P-201ENST00000606352 106 ntBASIC1.59□□□□□ -2.15
RUFY4Q6ZNE9 MIR6078-201ENST00000611069 100 ntBASIC1.59□□□□□ -2.15
RUFY4Q6ZNE9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
RUFY4Q6ZNE9 RNU1-36P-201ENST00000365130 165 ntBASIC1.58□□□□□ -2.16
RUFY4Q6ZNE9 RNU6-53P-201ENST00000365367 106 ntBASIC1.58□□□□□ -2.16
RUFY4Q6ZNE9 MIR1257-201ENST00000408490 117 ntBASIC1.58□□□□□ -2.16
RUFY4Q6ZNE9 SNORD93-201ENST00000408813 74 ntBASIC1.58□□□□□ -2.16
RUFY4Q6ZNE9 RNU7-185P-201ENST00000459215 60 ntBASIC1.58□□□□□ -2.16
RUFY4Q6ZNE9 RNU6-1194P-201ENST00000516208 104 ntBASIC1.58□□□□□ -2.16
RUFY4Q6ZNE9 RNA5SP170-201ENST00000517150 101 ntBASIC1.58□□□□□ -2.16
RUFY4Q6ZNE9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
RUFY4Q6ZNE9 RNU6-640P-201ENST00000363693 105 ntBASIC1.57□□□□□ -2.16
RUFY4Q6ZNE9 SNORA25-201ENST00000384384 134 ntBASIC1.57□□□□□ -2.16
RUFY4Q6ZNE9 MIR548G-201ENST00000408442 89 ntBASIC1.57□□□□□ -2.16
RUFY4Q6ZNE9 MIR6734-201ENST00000621166 68 ntBASIC1.57□□□□□ -2.16
RUFY4Q6ZNE9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
RUFY4Q6ZNE9 RNU6-1298P-201ENST00000362456 101 ntBASIC1.56□□□□□ -2.16
RUFY4Q6ZNE9 RNA5SP133-201ENST00000363368 119 ntBASIC1.56□□□□□ -2.16
RUFY4Q6ZNE9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RUFY4Q6ZNE9 RPS26P5-201ENST00000418544 335 ntBASIC1.56□□□□□ -2.16
RUFY4Q6ZNE9 RNA5SP102-201ENST00000516865 106 ntBASIC1.56□□□□□ -2.16
RUFY4Q6ZNE9 MIR4491-201ENST00000581087 68 ntBASIC1.56□□□□□ -2.16
RUFY4Q6ZNE9 MIR7974-201ENST00000615835 79 ntBASIC1.56□□□□□ -2.16
RUFY4Q6ZNE9 U6.109-201ENST00000636749 87 ntBASIC1.56□□□□□ -2.16
RUFY4Q6ZNE9 AC023934.1-201ENST00000574529 2389 ntBASIC1.56□□□□□ -2.16
RUFY4Q6ZNE9 RNU4-58P-201ENST00000363192 141 ntBASIC1.55□□□□□ -2.16
RUFY4Q6ZNE9 Y_RNA.119-201ENST00000363301 96 ntBASIC1.55□□□□□ -2.16
RUFY4Q6ZNE9 Y_RNA.247-201ENST00000364500 92 ntBASIC1.55□□□□□ -2.16
RUFY4Q6ZNE9 SNORD26-201ENST00000384147 75 ntBASIC1.55□□□□□ -2.16
RUFY4Q6ZNE9 Y_RNA.588-201ENST00000391254 102 ntBASIC1.55□□□□□ -2.16
RUFY4Q6ZNE9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.55□□□□□ -2.16
RUFY4Q6ZNE9 MTND5P40-201ENST00000559945 246 ntBASIC1.55□□□□□ -2.16
RUFY4Q6ZNE9 AC023827.1-201ENST00000569247 97 ntBASIC1.55□□□□□ -2.16
RUFY4Q6ZNE9 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.55□□□□□ -2.16
RUFY4Q6ZNE9 AC012531.4-201ENST00000616509 177 ntBASIC1.55□□□□□ -2.16
RUFY4Q6ZNE9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.55□□□□□ -2.16
RUFY4Q6ZNE9 MIR222-201ENST00000384992 110 ntBASIC1.54□□□□□ -2.16
RUFY4Q6ZNE9 SNORD83.1-201ENST00000411362 77 ntBASIC1.54□□□□□ -2.16
RUFY4Q6ZNE9 Y_RNA.705-201ENST00000516862 110 ntBASIC1.54□□□□□ -2.16
RUFY4Q6ZNE9 MIR4777-201ENST00000583710 86 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 243.2 ms