Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC140658.3-201ENST00000567603 271 ntBASIC1.92□□□□□ -2.1
CNKSR3Q6P9H4 MIR3935-201ENST00000583472 104 ntBASIC1.92□□□□□ -2.1
CNKSR3Q6P9H4 MIR4448-201ENST00000584360 86 ntBASIC1.92□□□□□ -2.1
CNKSR3Q6P9H4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.92□□□□□ -2.1
CNKSR3Q6P9H4 AL662814.1-201ENST00000617364 121 ntBASIC1.92□□□□□ -2.1
CNKSR3Q6P9H4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.92□□□□□ -2.1
CNKSR3Q6P9H4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CNKSR3Q6P9H4 RNU6-480P-201ENST00000384332 107 ntBASIC1.91□□□□□ -2.1
CNKSR3Q6P9H4 RNU4-83P-201ENST00000410863 133 ntBASIC1.91□□□□□ -2.1
CNKSR3Q6P9H4 RNA5SP489-201ENST00000410986 109 ntBASIC1.91□□□□□ -2.1
CNKSR3Q6P9H4 AL161935.2-201ENST00000414627 60 ntBASIC1.91□□□□□ -2.1
CNKSR3Q6P9H4 JTBP1-201ENST00000441314 247 ntBASIC1.91□□□□□ -2.1
CNKSR3Q6P9H4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.91□□□□□ -2.1
CNKSR3Q6P9H4 RNU7-153P-201ENST00000516455 62 ntBASIC1.91□□□□□ -2.1
CNKSR3Q6P9H4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.91□□□□□ -2.1
CNKSR3Q6P9H4 PRELID3BP2-201ENST00000605362 201 ntBASIC1.91□□□□□ -2.1
CNKSR3Q6P9H4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CNKSR3Q6P9H4 RNU6-949P-201ENST00000384040 107 ntBASIC1.9□□□□□ -2.11
CNKSR3Q6P9H4 MIR1302-7-201ENST00000408841 72 ntBASIC1.9□□□□□ -2.11
CNKSR3Q6P9H4 RNA5SP237-201ENST00000410414 113 ntBASIC1.9□□□□□ -2.11
CNKSR3Q6P9H4 AC027119.1-201ENST00000440877 241 ntBASIC1.9□□□□□ -2.11
CNKSR3Q6P9H4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.9□□□□□ -2.11
CNKSR3Q6P9H4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
CNKSR3Q6P9H4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CNKSR3Q6P9H4 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
CNKSR3Q6P9H4 RNY1P2-201ENST00000364820 117 ntBASIC1.89□□□□□ -2.11
CNKSR3Q6P9H4 MIR499A-201ENST00000384903 122 ntBASIC1.89□□□□□ -2.11
CNKSR3Q6P9H4 SNORD41-201ENST00000386967 70 ntBASIC1.89□□□□□ -2.11
CNKSR3Q6P9H4 AC133485.1-201ENST00000567176 124 ntBASIC1.89□□□□□ -2.11
CNKSR3Q6P9H4 AC090897.1-201ENST00000580909 226 ntBASIC1.89□□□□□ -2.11
CNKSR3Q6P9H4 MIR3192-201ENST00000584920 77 ntBASIC1.89□□□□□ -2.11
CNKSR3Q6P9H4 AL512598.1-201ENST00000610158 273 ntBASIC1.89□□□□□ -2.11
CNKSR3Q6P9H4 AP000553.5-201ENST00000641933 54 ntBASIC1.89□□□□□ -2.11
CNKSR3Q6P9H4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CNKSR3Q6P9H4 RNA5SP37-201ENST00000365420 130 ntBASIC1.88□□□□□ -2.11
CNKSR3Q6P9H4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.88□□□□□ -2.11
CNKSR3Q6P9H4 RNU6-519P-201ENST00000410590 108 ntBASIC1.88□□□□□ -2.11
CNKSR3Q6P9H4 snoU13.2-201ENST00000459201 104 ntBASIC1.88□□□□□ -2.11
CNKSR3Q6P9H4 AC139453.2-201ENST00000487255 133 ntBASIC1.88□□□□□ -2.11
CNKSR3Q6P9H4 AC138749.4-201ENST00000563970 127 ntBASIC1.88□□□□□ -2.11
CNKSR3Q6P9H4 MIR3198-2-201ENST00000577868 80 ntBASIC1.88□□□□□ -2.11
CNKSR3Q6P9H4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CNKSR3Q6P9H4 Y_RNA.168-201ENST00000363740 102 ntBASIC1.87□□□□□ -2.11
CNKSR3Q6P9H4 RNU6-1229P-201ENST00000364295 107 ntBASIC1.87□□□□□ -2.11
CNKSR3Q6P9H4 snoU13.9-201ENST00000458927 103 ntBASIC1.87□□□□□ -2.11
CNKSR3Q6P9H4 RNU6-717P-201ENST00000459076 104 ntBASIC1.87□□□□□ -2.11
CNKSR3Q6P9H4 SNORD4B-201ENST00000459083 72 ntBASIC1.87□□□□□ -2.11
CNKSR3Q6P9H4 RNU7-95P-201ENST00000459222 64 ntBASIC1.87□□□□□ -2.11
CNKSR3Q6P9H4 RNU6-322P-201ENST00000516010 103 ntBASIC1.87□□□□□ -2.11
CNKSR3Q6P9H4 SNORD111.1-201ENST00000516421 86 ntBASIC1.87□□□□□ -2.11
CNKSR3Q6P9H4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.87□□□□□ -2.11
CNKSR3Q6P9H4 SNORA25.9-201ENST00000365087 128 ntBASIC1.86□□□□□ -2.11
CNKSR3Q6P9H4 MIR563-201ENST00000385080 79 ntBASIC1.86□□□□□ -2.11
CNKSR3Q6P9H4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CNKSR3Q6P9H4 SNRPGP12-201ENST00000449481 213 ntBASIC1.86□□□□□ -2.11
CNKSR3Q6P9H4 RNU7-85P-201ENST00000458851 63 ntBASIC1.86□□□□□ -2.11
CNKSR3Q6P9H4 snoU13.25-201ENST00000458945 104 ntBASIC1.86□□□□□ -2.11
CNKSR3Q6P9H4 AC008834.1-201ENST00000511612 175 ntBASIC1.86□□□□□ -2.11
CNKSR3Q6P9H4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
CNKSR3Q6P9H4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.86□□□□□ -2.11
CNKSR3Q6P9H4 AL096861.1-201ENST00000610899 123 ntBASIC1.86□□□□□ -2.11
CNKSR3Q6P9H4 MIR6740-201ENST00000618268 113 ntBASIC1.86□□□□□ -2.11
CNKSR3Q6P9H4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CNKSR3Q6P9H4 RNA5SP259-201ENST00000365541 109 ntBASIC1.85□□□□□ -2.11
CNKSR3Q6P9H4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.85□□□□□ -2.11
CNKSR3Q6P9H4 MIR588-201ENST00000384900 83 ntBASIC1.85□□□□□ -2.11
CNKSR3Q6P9H4 MIR513A1-201ENST00000385138 129 ntBASIC1.85□□□□□ -2.11
CNKSR3Q6P9H4 AC073261.1-201ENST00000429409 121 ntBASIC1.85□□□□□ -2.11
CNKSR3Q6P9H4 SNORA25.13-201ENST00000516395 103 ntBASIC1.85□□□□□ -2.11
CNKSR3Q6P9H4 MIR4500-201ENST00000579472 76 ntBASIC1.85□□□□□ -2.11
CNKSR3Q6P9H4 MIR8066-201ENST00000617280 78 ntBASIC1.85□□□□□ -2.11
CNKSR3Q6P9H4 RNU4-32P-201ENST00000363404 141 ntBASIC1.84□□□□□ -2.11
CNKSR3Q6P9H4 SNORD115-37-201ENST00000363768 82 ntBASIC1.84□□□□□ -2.11
CNKSR3Q6P9H4 RNU6-478P-201ENST00000363904 110 ntBASIC1.84□□□□□ -2.11
CNKSR3Q6P9H4 RNA5SP48-201ENST00000363969 126 ntBASIC1.84□□□□□ -2.11
CNKSR3Q6P9H4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CNKSR3Q6P9H4 AC005908.1-201ENST00000468701 347 ntBASIC1.84□□□□□ -2.11
CNKSR3Q6P9H4 RNU6-922P-201ENST00000516753 99 ntBASIC1.84□□□□□ -2.11
CNKSR3Q6P9H4 RNU6-850P-201ENST00000516934 103 ntBASIC1.84□□□□□ -2.11
CNKSR3Q6P9H4 SNORA77B-201ENST00000578179 125 ntBASIC1.84□□□□□ -2.11
CNKSR3Q6P9H4 AP000753.3-201ENST00000604083 169 ntBASIC1.84□□□□□ -2.11
CNKSR3Q6P9H4 MIR30D-201ENST00000362283 70 ntBASIC1.83□□□□□ -2.12
CNKSR3Q6P9H4 Y_RNA.57-201ENST00000362806 113 ntBASIC1.83□□□□□ -2.12
CNKSR3Q6P9H4 SNORA25.3-201ENST00000363205 127 ntBASIC1.83□□□□□ -2.12
CNKSR3Q6P9H4 MIR1236-201ENST00000408340 102 ntBASIC1.83□□□□□ -2.12
CNKSR3Q6P9H4 BX276092.1-201ENST00000427368 251 ntBASIC1.83□□□□□ -2.12
CNKSR3Q6P9H4 AL450471.1-201ENST00000447509 127 ntBASIC1.83□□□□□ -2.12
CNKSR3Q6P9H4 BX248123.2-201ENST00000606318 124 ntBASIC1.83□□□□□ -2.12
CNKSR3Q6P9H4 uc_338.6-201ENST00000613544 171 ntBASIC1.83□□□□□ -2.12
CNKSR3Q6P9H4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CNKSR3Q6P9H4 U6.109-201ENST00000636749 87 ntBASIC1.83□□□□□ -2.12
CNKSR3Q6P9H4 HSPE1P24-201ENST00000450782 238 ntBASIC1.82□□□□□ -2.12
CNKSR3Q6P9H4 MIR4419B-201ENST00000577260 68 ntBASIC1.82□□□□□ -2.12
CNKSR3Q6P9H4 SNORD53B-201ENST00000577887 78 ntBASIC1.82□□□□□ -2.12
CNKSR3Q6P9H4 AC145423.2-201ENST00000610631 239 ntBASIC1.82□□□□□ -2.12
CNKSR3Q6P9H4 MIR8063-201ENST00000621930 81 ntBASIC1.82□□□□□ -2.12
CNKSR3Q6P9H4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.81□□□□□ -2.12
CNKSR3Q6P9H4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.81□□□□□ -2.12
CNKSR3Q6P9H4 Y_RNA.119-201ENST00000363301 96 ntBASIC1.81□□□□□ -2.12
CNKSR3Q6P9H4 RNU6-624P-201ENST00000363411 107 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 225.1 ms