Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.04□□□□□ -2.08
USPL1Q5W0Q7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.04□□□□□ -2.08
USPL1Q5W0Q7 MIR6740-201ENST00000618268 113 ntBASIC2.04□□□□□ -2.08
USPL1Q5W0Q7 MIR6516-201ENST00000630554 81 ntBASIC2.04□□□□□ -2.08
USPL1Q5W0Q7 Y_RNA.168-201ENST00000363740 102 ntBASIC2.03□□□□□ -2.08
USPL1Q5W0Q7 Y_RNA.247-201ENST00000364500 92 ntBASIC2.03□□□□□ -2.08
USPL1Q5W0Q7 RNU6-580P-201ENST00000365159 107 ntBASIC2.03□□□□□ -2.08
USPL1Q5W0Q7 RNU6-820P-201ENST00000384273 107 ntBASIC2.03□□□□□ -2.08
USPL1Q5W0Q7 MIR450A2-201ENST00000385022 100 ntBASIC2.03□□□□□ -2.08
USPL1Q5W0Q7 MIR518E-201ENST00000385252 88 ntBASIC2.03□□□□□ -2.08
USPL1Q5W0Q7 SNORA26.2-201ENST00000390922 122 ntBASIC2.03□□□□□ -2.08
USPL1Q5W0Q7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.03□□□□□ -2.08
USPL1Q5W0Q7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.03□□□□□ -2.08
USPL1Q5W0Q7 AC024614.2-201ENST00000577584 372 ntBASIC2.03□□□□□ -2.08
USPL1Q5W0Q7 MIR548Z-201ENST00000584743 97 ntBASIC2.03□□□□□ -2.08
USPL1Q5W0Q7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.03□□□□□ -2.08
USPL1Q5W0Q7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USPL1Q5W0Q7 HSBP1P2-201ENST00000299671 229 ntBASIC2.02□□□□□ -2.09
USPL1Q5W0Q7 MIR30D-201ENST00000362283 70 ntBASIC2.02□□□□□ -2.09
USPL1Q5W0Q7 RNU6-1163P-201ENST00000364516 107 ntBASIC2.02□□□□□ -2.09
USPL1Q5W0Q7 RNU6-1134P-201ENST00000365156 101 ntBASIC2.02□□□□□ -2.09
USPL1Q5W0Q7 Y_RNA.467-201ENST00000384297 102 ntBASIC2.02□□□□□ -2.09
USPL1Q5W0Q7 RNU6-1054P-201ENST00000411293 104 ntBASIC2.02□□□□□ -2.09
USPL1Q5W0Q7 AL512310.8-201ENST00000550183 120 ntBASIC2.02□□□□□ -2.09
USPL1Q5W0Q7 Y_RNA.567-201ENST00000384736 106 ntBASIC2.01□□□□□ -2.09
USPL1Q5W0Q7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
USPL1Q5W0Q7 MIR934-201ENST00000401241 83 ntBASIC2.01□□□□□ -2.09
USPL1Q5W0Q7 MIR1323-201ENST00000408090 73 ntBASIC2.01□□□□□ -2.09
USPL1Q5W0Q7 RNY4P29-201ENST00000410801 97 ntBASIC2.01□□□□□ -2.09
USPL1Q5W0Q7 MIR18B-201ENST00000454574 71 ntBASIC2.01□□□□□ -2.09
USPL1Q5W0Q7 SNORA7.1-201ENST00000363750 139 ntBASIC2□□□□□ -2.09
USPL1Q5W0Q7 Y_RNA.173-201ENST00000363776 113 ntBASIC2□□□□□ -2.09
USPL1Q5W0Q7 Y_RNA.224-201ENST00000364308 111 ntBASIC2□□□□□ -2.09
USPL1Q5W0Q7 U8.15-201ENST00000390947 134 ntBASIC2□□□□□ -2.09
USPL1Q5W0Q7 SNORA67.6-201ENST00000391093 99 ntBASIC2□□□□□ -2.09
USPL1Q5W0Q7 MTND5P40-201ENST00000559945 246 ntBASIC2□□□□□ -2.09
USPL1Q5W0Q7 RNU6-1244P-201ENST00000363614 108 ntBASIC1.99□□□□□ -2.09
USPL1Q5W0Q7 SNORD58A-201ENST00000383875 65 ntBASIC1.99□□□□□ -2.09
USPL1Q5W0Q7 RNU6-205P-201ENST00000390858 107 ntBASIC1.99□□□□□ -2.09
USPL1Q5W0Q7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.99□□□□□ -2.09
USPL1Q5W0Q7 SPINT5P-201ENST00000448174 155 ntBASIC1.99□□□□□ -2.09
USPL1Q5W0Q7 RNU6-165P-201ENST00000517170 99 ntBASIC1.99□□□□□ -2.09
USPL1Q5W0Q7 AC012676.2-201ENST00000619258 186 ntBASIC1.99□□□□□ -2.09
USPL1Q5W0Q7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
USPL1Q5W0Q7 RNU6-1125P-201ENST00000363601 107 ntBASIC1.98□□□□□ -2.09
USPL1Q5W0Q7 RNU6-480P-201ENST00000384332 107 ntBASIC1.98□□□□□ -2.09
USPL1Q5W0Q7 RNU6-162P-201ENST00000516228 103 ntBASIC1.98□□□□□ -2.09
USPL1Q5W0Q7 RNU6-762P-201ENST00000517107 102 ntBASIC1.98□□□□□ -2.09
USPL1Q5W0Q7 RNU6-86P-201ENST00000606534 107 ntBASIC1.98□□□□□ -2.09
USPL1Q5W0Q7 MIR6504-201ENST00000613520 61 ntBASIC1.98□□□□□ -2.09
USPL1Q5W0Q7 AC008163.1-202ENST00000636004 2889 ntBASIC1.98□□□□□ -2.09
USPL1Q5W0Q7 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.97□□□□□ -2.09
USPL1Q5W0Q7 MIR4421-201ENST00000578133 69 ntBASIC1.97□□□□□ -2.09
USPL1Q5W0Q7 SEPT14P17-201ENST00000617978 177 ntBASIC1.97□□□□□ -2.09
USPL1Q5W0Q7 SNORD116-22-201ENST00000384430 92 ntBASIC1.96□□□□□ -2.1
USPL1Q5W0Q7 RNU1-92P-201ENST00000517017 135 ntBASIC1.96□□□□□ -2.1
USPL1Q5W0Q7 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.96□□□□□ -2.1
USPL1Q5W0Q7 AC138749.4-201ENST00000563970 127 ntBASIC1.96□□□□□ -2.1
USPL1Q5W0Q7 AC012493.3-201ENST00000604494 112 ntBASIC1.96□□□□□ -2.1
USPL1Q5W0Q7 AC103810.7-201ENST00000607821 91 ntBASIC1.96□□□□□ -2.1
USPL1Q5W0Q7 ZNF209P-201ENST00000593450 2304 ntBASIC1.95□□□□□ -2.1
USPL1Q5W0Q7 RN7SKP12-201ENST00000516275 143 ntBASIC1.95□□□□□ -2.1
USPL1Q5W0Q7 RNU6-902P-201ENST00000517212 91 ntBASIC1.95□□□□□ -2.1
USPL1Q5W0Q7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.95□□□□□ -2.1
USPL1Q5W0Q7 Y_RNA.17-201ENST00000362433 111 ntBASIC1.94□□□□□ -2.1
USPL1Q5W0Q7 MIR517C-201ENST00000385103 95 ntBASIC1.94□□□□□ -2.1
USPL1Q5W0Q7 RPS27P16-201ENST00000425758 201 ntBASIC1.94□□□□□ -2.1
USPL1Q5W0Q7 RN7SKP88-201ENST00000516847 250 ntBASIC1.94□□□□□ -2.1
USPL1Q5W0Q7 7SK.8-201ENST00000612110 250 ntBASIC1.94□□□□□ -2.1
USPL1Q5W0Q7 7SK.11-201ENST00000615477 250 ntBASIC1.94□□□□□ -2.1
USPL1Q5W0Q7 7SK.13-201ENST00000622040 250 ntBASIC1.94□□□□□ -2.1
USPL1Q5W0Q7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
USPL1Q5W0Q7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
USPL1Q5W0Q7 RNU6-654P-201ENST00000364373 107 ntBASIC1.93□□□□□ -2.1
USPL1Q5W0Q7 RNU6-571P-201ENST00000384128 107 ntBASIC1.93□□□□□ -2.1
USPL1Q5W0Q7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
USPL1Q5W0Q7 SNORA31.24-201ENST00000517232 57 ntBASIC1.93□□□□□ -2.1
USPL1Q5W0Q7 AC062037.1-201ENST00000605302 128 ntBASIC1.93□□□□□ -2.1
USPL1Q5W0Q7 AL157834.3-201ENST00000615543 103 ntBASIC1.93□□□□□ -2.1
USPL1Q5W0Q7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
USPL1Q5W0Q7 Y_RNA.190-201ENST00000363964 101 ntBASIC1.92□□□□□ -2.1
USPL1Q5W0Q7 RNU6-53P-201ENST00000365367 106 ntBASIC1.92□□□□□ -2.1
USPL1Q5W0Q7 Y_RNA.593-201ENST00000410292 98 ntBASIC1.92□□□□□ -2.1
USPL1Q5W0Q7 SNRPGP12-201ENST00000449481 213 ntBASIC1.92□□□□□ -2.1
USPL1Q5W0Q7 snoU13.18-201ENST00000459483 104 ntBASIC1.92□□□□□ -2.1
USPL1Q5W0Q7 U6.109-201ENST00000636749 87 ntBASIC1.92□□□□□ -2.1
USPL1Q5W0Q7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
USPL1Q5W0Q7 Y_RNA.119-201ENST00000363301 96 ntBASIC1.91□□□□□ -2.1
USPL1Q5W0Q7 RNA5SP133-201ENST00000363368 119 ntBASIC1.91□□□□□ -2.1
USPL1Q5W0Q7 RNU6-675P-201ENST00000384236 104 ntBASIC1.91□□□□□ -2.1
USPL1Q5W0Q7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.91□□□□□ -2.1
USPL1Q5W0Q7 RNU1-123P-201ENST00000458950 160 ntBASIC1.91□□□□□ -2.1
USPL1Q5W0Q7 RNA5SP102-201ENST00000516865 106 ntBASIC1.91□□□□□ -2.1
USPL1Q5W0Q7 AC090897.1-201ENST00000580909 226 ntBASIC1.91□□□□□ -2.1
USPL1Q5W0Q7 SNORD113.3-201ENST00000364630 78 ntBASIC1.9□□□□□ -2.11
USPL1Q5W0Q7 Y_RNA.388-201ENST00000383919 113 ntBASIC1.9□□□□□ -2.11
USPL1Q5W0Q7 SNORA2B-201ENST00000384583 137 ntBASIC1.9□□□□□ -2.11
USPL1Q5W0Q7 RNU1-98P-201ENST00000458992 160 ntBASIC1.9□□□□□ -2.11
USPL1Q5W0Q7 RNU6-1194P-201ENST00000516208 104 ntBASIC1.9□□□□□ -2.11
USPL1Q5W0Q7 MIR4500-201ENST00000579472 76 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms