Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 RNU7-48P-201ENST00000458875 63 ntBASIC-1.68□□□□□ -2.68
SKP1P63208 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.68□□□□□ -2.68
SKP1P63208 SNORA40.17-201ENST00000517256 115 ntBASIC-1.68□□□□□ -2.68
SKP1P63208 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.68□□□□□ -2.68
SKP1P63208 snoU18.1-201ENST00000629629 71 ntBASIC-1.68□□□□□ -2.68
SKP1P63208 RNU6-10P-201ENST00000384036 107 ntBASIC-1.69□□□□□ -2.68
SKP1P63208 AL606845.1-201ENST00000404881 255 ntBASIC-1.69□□□□□ -2.68
SKP1P63208 SNORA79-201ENST00000408376 140 ntBASIC-1.69□□□□□ -2.68
SKP1P63208 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.69□□□□□ -2.68
SKP1P63208 AP000770.2-201ENST00000623694 100 ntBASIC-1.69□□□□□ -2.68
SKP1P63208 SNORA25.1-201ENST00000362326 128 ntBASIC-1.7□□□□□ -2.68
SKP1P63208 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.7□□□□□ -2.68
SKP1P63208 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.7□□□□□ -2.68
SKP1P63208 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.7□□□□□ -2.68
SKP1P63208 RNU6-559P-201ENST00000516151 98 ntBASIC-1.7□□□□□ -2.68
SKP1P63208 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.7□□□□□ -2.68
SKP1P63208 MIR4306-201ENST00000583390 91 ntBASIC-1.7□□□□□ -2.68
SKP1P63208 AC037487.3-201ENST00000606668 112 ntBASIC-1.7□□□□□ -2.68
SKP1P63208 RNU6-845P-201ENST00000362578 103 ntBASIC-1.71□□□□□ -2.68
SKP1P63208 RNU6-973P-201ENST00000364690 107 ntBASIC-1.71□□□□□ -2.68
SKP1P63208 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.71□□□□□ -2.68
SKP1P63208 MIR147A-201ENST00000385079 72 ntBASIC-1.71□□□□□ -2.68
SKP1P63208 MIR616-201ENST00000385293 97 ntBASIC-1.71□□□□□ -2.68
SKP1P63208 RNU6-287P-201ENST00000516230 98 ntBASIC-1.71□□□□□ -2.68
SKP1P63208 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.71□□□□□ -2.68
SKP1P63208 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.72□□□□□ -2.68
SKP1P63208 RNU6-290P-201ENST00000365212 101 ntBASIC-1.72□□□□□ -2.68
SKP1P63208 RNU6-326P-201ENST00000365480 107 ntBASIC-1.72□□□□□ -2.68
SKP1P63208 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.72□□□□□ -2.68
SKP1P63208 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.72□□□□□ -2.68
SKP1P63208 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.72□□□□□ -2.68
SKP1P63208 RNA5SP266-201ENST00000410273 108 ntBASIC-1.72□□□□□ -2.68
SKP1P63208 MIR1270-201ENST00000459320 83 ntBASIC-1.72□□□□□ -2.68
SKP1P63208 AC113139.1-201ENST00000605049 239 ntBASIC-1.72□□□□□ -2.68
SKP1P63208 AP001362.1-201ENST00000625165 124 ntBASIC-1.72□□□□□ -2.68
SKP1P63208 MIR206-201ENST00000384872 86 ntBASIC-1.73□□□□□ -2.69
SKP1P63208 SNORD115-46-201ENST00000390982 71 ntBASIC-1.73□□□□□ -2.69
SKP1P63208 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.73□□□□□ -2.69
SKP1P63208 SNORD58B-201ENST00000607313 66 ntBASIC-1.73□□□□□ -2.69
SKP1P63208 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.73□□□□□ -2.69
SKP1P63208 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.74□□□□□ -2.69
SKP1P63208 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.74□□□□□ -2.69
SKP1P63208 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.74□□□□□ -2.69
SKP1P63208 RNU6-453P-201ENST00000516819 85 ntBASIC-1.74□□□□□ -2.69
SKP1P63208 AC007012.1-201ENST00000567192 175 ntBASIC-1.74□□□□□ -2.69
SKP1P63208 MIR8068-201ENST00000618032 68 ntBASIC-1.74□□□□□ -2.69
SKP1P63208 SNORD115-35-201ENST00000365122 82 ntBASIC-1.75□□□□□ -2.69
SKP1P63208 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.75□□□□□ -2.69
SKP1P63208 RNU6-571P-201ENST00000384128 107 ntBASIC-1.75□□□□□ -2.69
SKP1P63208 MIR624-201ENST00000385217 97 ntBASIC-1.75□□□□□ -2.69
SKP1P63208 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.75□□□□□ -2.69
SKP1P63208 MIR3165-201ENST00000579874 75 ntBASIC-1.75□□□□□ -2.69
SKP1P63208 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.76□□□□□ -2.69
SKP1P63208 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.76□□□□□ -2.69
SKP1P63208 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.76□□□□□ -2.69
SKP1P63208 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.76□□□□□ -2.69
SKP1P63208 SNORD2-201ENST00000459163 69 ntBASIC-1.76□□□□□ -2.69
SKP1P63208 MIR6854-201ENST00000614935 69 ntBASIC-1.76□□□□□ -2.69
SKP1P63208 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.76□□□□□ -2.69
SKP1P63208 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.77□□□□□ -2.69
SKP1P63208 RNA5SP192-201ENST00000364404 120 ntBASIC-1.77□□□□□ -2.69
SKP1P63208 RNU6-211P-201ENST00000384047 107 ntBASIC-1.77□□□□□ -2.69
SKP1P63208 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.77□□□□□ -2.69
SKP1P63208 RNU4-43P-201ENST00000410628 137 ntBASIC-1.77□□□□□ -2.69
SKP1P63208 RNU6-561P-201ENST00000516222 102 ntBASIC-1.77□□□□□ -2.69
SKP1P63208 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.77□□□□□ -2.69
SKP1P63208 UBE2WP1-201ENST00000362030 340 ntBASIC-1.78□□□□□ -2.69
SKP1P63208 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.78□□□□□ -2.69
SKP1P63208 RNU4-32P-201ENST00000363404 141 ntBASIC-1.78□□□□□ -2.69
SKP1P63208 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.78□□□□□ -2.69
SKP1P63208 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.78□□□□□ -2.69
SKP1P63208 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.78□□□□□ -2.69
SKP1P63208 SNORD81.2-201ENST00000365153 76 ntBASIC-1.78□□□□□ -2.69
SKP1P63208 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.78□□□□□ -2.69
SKP1P63208 MIR516A2-201ENST00000384888 90 ntBASIC-1.78□□□□□ -2.69
SKP1P63208 MIR516A1-201ENST00000385033 90 ntBASIC-1.78□□□□□ -2.69
SKP1P63208 RNY4P36-201ENST00000391116 96 ntBASIC-1.78□□□□□ -2.69
SKP1P63208 SNORD116-25-201ENST00000516517 92 ntBASIC-1.78□□□□□ -2.69
SKP1P63208 MIR3115-201ENST00000577915 68 ntBASIC-1.78□□□□□ -2.69
SKP1P63208 AC022079.1-201ENST00000621546 602 ntBASIC-1.78□□□□□ -2.69
SKP1P63208 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.79□□□□□ -2.7
SKP1P63208 RNU6-728P-201ENST00000365375 104 ntBASIC-1.79□□□□□ -2.7
SKP1P63208 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.79□□□□□ -2.7
SKP1P63208 RNU6-476P-201ENST00000384726 107 ntBASIC-1.79□□□□□ -2.7
SKP1P63208 AC104985.2-201ENST00000620598 500 ntBASIC-1.79□□□□□ -2.7
SKP1P63208 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.8□□□□□ -2.7
SKP1P63208 RNU6-905P-201ENST00000384434 107 ntBASIC-1.8□□□□□ -2.7
SKP1P63208 RNU2-35P-201ENST00000516446 142 ntBASIC-1.8□□□□□ -2.7
SKP1P63208 snoU83B.1-201ENST00000517136 88 ntBASIC-1.8□□□□□ -2.7
SKP1P63208 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.81□□□□□ -2.7
SKP1P63208 SNORD74.6-201ENST00000364796 70 ntBASIC-1.81□□□□□ -2.7
SKP1P63208 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.81□□□□□ -2.7
SKP1P63208 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.81□□□□□ -2.7
SKP1P63208 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.81□□□□□ -2.7
SKP1P63208 RNU6-720P-201ENST00000516363 108 ntBASIC-1.81□□□□□ -2.7
SKP1P63208 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.81□□□□□ -2.7
SKP1P63208 RNU6-850P-201ENST00000516934 103 ntBASIC-1.81□□□□□ -2.7
SKP1P63208 AC009779.6-201ENST00000603972 165 ntBASIC-1.81□□□□□ -2.7
SKP1P63208 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.82□□□□□ -2.7
SKP1P63208 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms