Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 Y_RNA.601-201ENST00000410500 113 ntBASIC1.53□□□□□ -2.16
HERVK_113P62684 RNU7-48P-201ENST00000458875 63 ntBASIC1.53□□□□□ -2.16
HERVK_113P62684 RNU1-98P-201ENST00000458992 160 ntBASIC1.53□□□□□ -2.16
HERVK_113P62684 UBL5P1-201ENST00000507979 193 ntBASIC1.53□□□□□ -2.16
HERVK_113P62684 SNORA40.13-201ENST00000516379 120 ntBASIC1.53□□□□□ -2.16
HERVK_113P62684 AC096720.1-201ENST00000604441 183 ntBASIC1.53□□□□□ -2.16
HERVK_113P62684 MIR376B-201ENST00000614515 100 ntBASIC1.53□□□□□ -2.16
HERVK_113P62684 AL442128.1-201ENST00000615151 90 ntBASIC1.53□□□□□ -2.16
HERVK_113P62684 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
HERVK_113P62684 Y_RNA.98-201ENST00000363109 102 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 Y_RNA.348-201ENST00000365403 103 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 Y_RNA.363-201ENST00000365529 113 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 RNY4P30-201ENST00000410216 95 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 RNU6-447P-201ENST00000410293 104 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 RNU6-1118P-201ENST00000410382 104 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 RNU6-1076P-201ENST00000410397 104 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 RNU6-355P-201ENST00000410427 104 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 RNU6-791P-201ENST00000410467 104 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 RNU6-705P-201ENST00000410601 104 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 RNU6-1100P-201ENST00000410691 104 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 RNU6-860P-201ENST00000410860 104 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 RNU6-1217P-201ENST00000411276 104 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 RNU6-785P-201ENST00000411324 104 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 MRPL35P3-201ENST00000421557 364 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 RNU6-795P-201ENST00000516323 103 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 RNA5SP170-201ENST00000517150 101 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 AC068338.1-201ENST00000565567 176 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 AC023827.1-201ENST00000569247 97 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 U6.90-201ENST00000614007 104 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 U6.70-201ENST00000620287 104 ntBASIC1.52□□□□□ -2.17
HERVK_113P62684 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
HERVK_113P62684 Y_RNA.107-201ENST00000363190 121 ntBASIC1.51□□□□□ -2.17
HERVK_113P62684 Y_RNA.168-201ENST00000363740 102 ntBASIC1.51□□□□□ -2.17
HERVK_113P62684 MT-TF-201ENST00000387314 71 ntBASIC1.51□□□□□ -2.17
HERVK_113P62684 U8.15-201ENST00000390947 134 ntBASIC1.51□□□□□ -2.17
HERVK_113P62684 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.51□□□□□ -2.17
HERVK_113P62684 AL591704.2-201ENST00000421658 181 ntBASIC1.51□□□□□ -2.17
HERVK_113P62684 RNU6-1298P-201ENST00000362456 101 ntBASIC1.5□□□□□ -2.17
HERVK_113P62684 SNORD113.3-201ENST00000364630 78 ntBASIC1.5□□□□□ -2.17
HERVK_113P62684 RNU6-905P-201ENST00000384434 107 ntBASIC1.5□□□□□ -2.17
HERVK_113P62684 RPS29P23-201ENST00000458635 123 ntBASIC1.5□□□□□ -2.17
HERVK_113P62684 snoU13.21-201ENST00000459368 105 ntBASIC1.5□□□□□ -2.17
HERVK_113P62684 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.5□□□□□ -2.17
HERVK_113P62684 Y_RNA.247-201ENST00000364500 92 ntBASIC1.49□□□□□ -2.17
HERVK_113P62684 SNORD45B-201ENST00000364617 72 ntBASIC1.49□□□□□ -2.17
HERVK_113P62684 RNU6-580P-201ENST00000365159 107 ntBASIC1.49□□□□□ -2.17
HERVK_113P62684 Y_RNA.377-201ENST00000365644 108 ntBASIC1.49□□□□□ -2.17
HERVK_113P62684 SNORD93-201ENST00000408813 74 ntBASIC1.49□□□□□ -2.17
HERVK_113P62684 SNORD83.1-201ENST00000411362 77 ntBASIC1.49□□□□□ -2.17
HERVK_113P62684 RNA5SP480-201ENST00000516840 109 ntBASIC1.49□□□□□ -2.17
HERVK_113P62684 AC012531.4-201ENST00000616509 177 ntBASIC1.49□□□□□ -2.17
HERVK_113P62684 AC012676.2-201ENST00000619258 186 ntBASIC1.49□□□□□ -2.17
HERVK_113P62684 AP001362.1-201ENST00000625165 124 ntBASIC1.49□□□□□ -2.17
HERVK_113P62684 U6.109-201ENST00000636749 87 ntBASIC1.49□□□□□ -2.17
HERVK_113P62684 RNU6-170P-201ENST00000362832 104 ntBASIC1.48□□□□□ -2.17
HERVK_113P62684 Y_RNA.93-201ENST00000363066 109 ntBASIC1.48□□□□□ -2.17
HERVK_113P62684 RNU6-640P-201ENST00000363693 105 ntBASIC1.48□□□□□ -2.17
HERVK_113P62684 SNORA80D-201ENST00000384488 135 ntBASIC1.48□□□□□ -2.17
HERVK_113P62684 MIR222-201ENST00000384992 110 ntBASIC1.48□□□□□ -2.17
HERVK_113P62684 MIR18B-201ENST00000454574 71 ntBASIC1.48□□□□□ -2.17
HERVK_113P62684 SNORA70.22-201ENST00000517160 124 ntBASIC1.48□□□□□ -2.17
HERVK_113P62684 AC036111.3-201ENST00000526389 112 ntBASIC1.48□□□□□ -2.17
HERVK_113P62684 MIR548Z-201ENST00000584743 97 ntBASIC1.48□□□□□ -2.17
HERVK_113P62684 RMST_2.1-201ENST00000617263 136 ntBASIC1.48□□□□□ -2.17
HERVK_113P62684 AC091304.10-201ENST00000641554 121 ntBASIC1.48□□□□□ -2.17
HERVK_113P62684 AC023934.1-201ENST00000574529 2389 ntBASIC1.48□□□□□ -2.17
HERVK_113P62684 RNA5SP133-201ENST00000363368 119 ntBASIC1.47□□□□□ -2.17
HERVK_113P62684 SNORD38.1-201ENST00000363863 68 ntBASIC1.47□□□□□ -2.17
HERVK_113P62684 SNORD38.2-201ENST00000384470 69 ntBASIC1.47□□□□□ -2.17
HERVK_113P62684 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.47□□□□□ -2.17
HERVK_113P62684 RNU7-21P-201ENST00000459430 62 ntBASIC1.47□□□□□ -2.17
HERVK_113P62684 Y_RNA.694-201ENST00000516677 117 ntBASIC1.47□□□□□ -2.17
HERVK_113P62684 MTND5P40-201ENST00000559945 246 ntBASIC1.47□□□□□ -2.17
HERVK_113P62684 AL078603.1-201ENST00000603824 313 ntBASIC1.47□□□□□ -2.17
HERVK_113P62684 AC008163.1-202ENST00000636004 2889 ntBASIC1.46□□□□□ -2.18
HERVK_113P62684 RNU6-403P-201ENST00000363163 104 ntBASIC1.46□□□□□ -2.18
HERVK_113P62684 RNU1-93P-201ENST00000364704 169 ntBASIC1.46□□□□□ -2.18
HERVK_113P62684 RNY1P2-201ENST00000364820 117 ntBASIC1.46□□□□□ -2.18
HERVK_113P62684 RNU6-934P-201ENST00000365154 107 ntBASIC1.46□□□□□ -2.18
HERVK_113P62684 RNU6-42P-201ENST00000384165 107 ntBASIC1.46□□□□□ -2.18
HERVK_113P62684 SNORA72.6-201ENST00000384520 129 ntBASIC1.46□□□□□ -2.18
HERVK_113P62684 MIR758-201ENST00000390227 88 ntBASIC1.46□□□□□ -2.18
HERVK_113P62684 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.46□□□□□ -2.18
HERVK_113P62684 AC015818.7-201ENST00000428754 109 ntBASIC1.46□□□□□ -2.18
HERVK_113P62684 MTATP8P2-201ENST00000435212 202 ntBASIC1.46□□□□□ -2.18
HERVK_113P62684 AC087499.7-201ENST00000441958 109 ntBASIC1.46□□□□□ -2.18
HERVK_113P62684 SPINT5P-201ENST00000448174 155 ntBASIC1.46□□□□□ -2.18
HERVK_113P62684 RNU6-1006P-201ENST00000516998 103 ntBASIC1.46□□□□□ -2.18
HERVK_113P62684 AC138749.4-201ENST00000563970 127 ntBASIC1.46□□□□□ -2.18
HERVK_113P62684 MIR2052-201ENST00000636055 55 ntBASIC1.46□□□□□ -2.18
HERVK_113P62684 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
HERVK_113P62684 Y_RNA.95-201ENST00000363079 95 ntBASIC1.45□□□□□ -2.18
HERVK_113P62684 SNORD111-201ENST00000408139 94 ntBASIC1.45□□□□□ -2.18
HERVK_113P62684 MIR1257-201ENST00000408490 117 ntBASIC1.45□□□□□ -2.18
HERVK_113P62684 RNU6-994P-201ENST00000410507 111 ntBASIC1.45□□□□□ -2.18
HERVK_113P62684 AC109327.2-201ENST00000448339 378 ntBASIC1.45□□□□□ -2.18
HERVK_113P62684 RNU7-90P-201ENST00000459216 62 ntBASIC1.45□□□□□ -2.18
HERVK_113P62684 SNORD79.1-201ENST00000516069 84 ntBASIC1.45□□□□□ -2.18
HERVK_113P62684 RNA5SP220-201ENST00000516298 104 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms