Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.63□□□□□ -2.51
EIF3EP60228 MIR548P-201ENST00000408336 84 ntBASIC-0.63□□□□□ -2.51
EIF3EP60228 RNA5SP285-201ENST00000516619 119 ntBASIC-0.63□□□□□ -2.51
EIF3EP60228 MIR4645-201ENST00000583158 77 ntBASIC-0.63□□□□□ -2.51
EIF3EP60228 RNA5SP205-201ENST00000364653 136 ntBASIC-0.64□□□□□ -2.51
EIF3EP60228 RNU6-643P-201ENST00000384018 107 ntBASIC-0.64□□□□□ -2.51
EIF3EP60228 RNU6-284P-201ENST00000411105 106 ntBASIC-0.64□□□□□ -2.51
EIF3EP60228 MIR4500-201ENST00000579472 76 ntBASIC-0.64□□□□□ -2.51
EIF3EP60228 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.65□□□□□ -2.51
EIF3EP60228 SNORD114-11-201ENST00000363738 75 ntBASIC-0.65□□□□□ -2.51
EIF3EP60228 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.65□□□□□ -2.51
EIF3EP60228 MIR548I2-201ENST00000408348 149 ntBASIC-0.65□□□□□ -2.51
EIF3EP60228 MIR4643-201ENST00000577473 78 ntBASIC-0.65□□□□□ -2.51
EIF3EP60228 MIR4801-201ENST00000582704 82 ntBASIC-0.65□□□□□ -2.51
EIF3EP60228 MIR4263-201ENST00000584745 83 ntBASIC-0.65□□□□□ -2.51
EIF3EP60228 RN7SL660P-201ENST00000614852 299 ntBASIC-0.65□□□□□ -2.51
EIF3EP60228 uc_338.36-201ENST00000622331 158 ntBASIC-0.65□□□□□ -2.51
EIF3EP60228 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.66□□□□□ -2.52
EIF3EP60228 RNU6-923P-201ENST00000364753 107 ntBASIC-0.66□□□□□ -2.52
EIF3EP60228 RNU6-690P-201ENST00000365242 106 ntBASIC-0.66□□□□□ -2.52
EIF3EP60228 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.66□□□□□ -2.52
EIF3EP60228 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.66□□□□□ -2.52
EIF3EP60228 RNU6-985P-201ENST00000410182 104 ntBASIC-0.66□□□□□ -2.52
EIF3EP60228 RNU7-48P-201ENST00000458875 63 ntBASIC-0.66□□□□□ -2.52
EIF3EP60228 RNU7-74P-201ENST00000459104 62 ntBASIC-0.66□□□□□ -2.52
EIF3EP60228 MIR6759-201ENST00000638110 65 ntBASIC-0.66□□□□□ -2.52
EIF3EP60228 RNU1-141P-201ENST00000364623 158 ntBASIC-0.67□□□□□ -2.52
EIF3EP60228 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.67□□□□□ -2.52
EIF3EP60228 MIR206-201ENST00000384872 86 ntBASIC-0.67□□□□□ -2.52
EIF3EP60228 RNU7-13P-201ENST00000516413 62 ntBASIC-0.67□□□□□ -2.52
EIF3EP60228 MTND5P40-201ENST00000559945 246 ntBASIC-0.67□□□□□ -2.52
EIF3EP60228 AC011603.4-201ENST00000611325 277 ntBASIC-0.67□□□□□ -2.52
EIF3EP60228 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.67□□□□□ -2.52
EIF3EP60228 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.68□□□□□ -2.52
EIF3EP60228 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.68□□□□□ -2.52
EIF3EP60228 SNORA32.3-201ENST00000384772 121 ntBASIC-0.68□□□□□ -2.52
EIF3EP60228 RNU4-69P-201ENST00000410677 143 ntBASIC-0.68□□□□□ -2.52
EIF3EP60228 MIR4432-201ENST00000581823 84 ntBASIC-0.68□□□□□ -2.52
EIF3EP60228 MIR3171-201ENST00000584270 74 ntBASIC-0.68□□□□□ -2.52
EIF3EP60228 RNU2-4P-201ENST00000606190 192 ntBASIC-0.68□□□□□ -2.52
EIF3EP60228 MIR8064-201ENST00000612863 90 ntBASIC-0.68□□□□□ -2.52
EIF3EP60228 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.69□□□□□ -2.52
EIF3EP60228 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.69□□□□□ -2.52
EIF3EP60228 U8.6-201ENST00000364939 135 ntBASIC-0.69□□□□□ -2.52
EIF3EP60228 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.69□□□□□ -2.52
EIF3EP60228 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.69□□□□□ -2.52
EIF3EP60228 SNORD63B-201ENST00000411005 70 ntBASIC-0.69□□□□□ -2.52
EIF3EP60228 RNU7-195P-201ENST00000458793 62 ntBASIC-0.69□□□□□ -2.52
EIF3EP60228 AC114755.3-201ENST00000481111 251 ntBASIC-0.69□□□□□ -2.52
EIF3EP60228 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.69□□□□□ -2.52
EIF3EP60228 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.69□□□□□ -2.52
EIF3EP60228 AC020661.2-201ENST00000560114 134 ntBASIC-0.69□□□□□ -2.52
EIF3EP60228 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.7□□□□□ -2.52
EIF3EP60228 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.7□□□□□ -2.52
EIF3EP60228 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.7□□□□□ -2.52
EIF3EP60228 MIR7-2-201ENST00000384970 110 ntBASIC-0.7□□□□□ -2.52
EIF3EP60228 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.7□□□□□ -2.52
EIF3EP60228 RNY3P16-201ENST00000516338 101 ntBASIC-0.7□□□□□ -2.52
EIF3EP60228 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.7□□□□□ -2.52
EIF3EP60228 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.7□□□□□ -2.52
EIF3EP60228 MIR548AZ-201ENST00000616567 95 ntBASIC-0.7□□□□□ -2.52
EIF3EP60228 AL391099.1-201ENST00000624635 187 ntBASIC-0.7□□□□□ -2.52
EIF3EP60228 AP001362.1-201ENST00000625165 124 ntBASIC-0.7□□□□□ -2.52
EIF3EP60228 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.71□□□□□ -2.52
EIF3EP60228 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.71□□□□□ -2.52
EIF3EP60228 RNU6-713P-201ENST00000384761 107 ntBASIC-0.71□□□□□ -2.52
EIF3EP60228 MT-TW-201ENST00000387382 68 ntBASIC-0.71□□□□□ -2.52
EIF3EP60228 AL603914.1-201ENST00000401964 204 ntBASIC-0.71□□□□□ -2.52
EIF3EP60228 AC093423.1-201ENST00000440817 142 ntBASIC-0.71□□□□□ -2.52
EIF3EP60228 RNU6-170P-201ENST00000362832 104 ntBASIC-0.72□□□□□ -2.52
EIF3EP60228 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.72□□□□□ -2.52
EIF3EP60228 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.72□□□□□ -2.52
EIF3EP60228 RNU6-480P-201ENST00000384332 107 ntBASIC-0.72□□□□□ -2.52
EIF3EP60228 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.72□□□□□ -2.52
EIF3EP60228 RNU6-240P-201ENST00000516098 97 ntBASIC-0.72□□□□□ -2.52
EIF3EP60228 RNU7-188P-201ENST00000517063 64 ntBASIC-0.72□□□□□ -2.52
EIF3EP60228 AC138907.4-201ENST00000570107 226 ntBASIC-0.72□□□□□ -2.52
EIF3EP60228 MIR4802-201ENST00000581881 80 ntBASIC-0.72□□□□□ -2.52
EIF3EP60228 AP001180.6-201ENST00000584918 159 ntBASIC-0.72□□□□□ -2.52
EIF3EP60228 AC021443.1-201ENST00000604478 211 ntBASIC-0.72□□□□□ -2.52
EIF3EP60228 AC069503.3-201ENST00000618674 145 ntBASIC-0.72□□□□□ -2.52
EIF3EP60228 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.72□□□□□ -2.53
EIF3EP60228 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.73□□□□□ -2.53
EIF3EP60228 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.73□□□□□ -2.53
EIF3EP60228 RNU6-524P-201ENST00000384270 107 ntBASIC-0.73□□□□□ -2.53
EIF3EP60228 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.73□□□□□ -2.53
EIF3EP60228 MIR181B2-201ENST00000385004 89 ntBASIC-0.73□□□□□ -2.53
EIF3EP60228 RNU7-164P-201ENST00000459221 62 ntBASIC-0.73□□□□□ -2.53
EIF3EP60228 RNU7-123P-201ENST00000515911 60 ntBASIC-0.73□□□□□ -2.53
EIF3EP60228 MIR548AG2-201ENST00000581228 64 ntBASIC-0.73□□□□□ -2.53
EIF3EP60228 MIR4473-201ENST00000583731 91 ntBASIC-0.73□□□□□ -2.53
EIF3EP60228 RNU6-275P-201ENST00000364910 107 ntBASIC-0.74□□□□□ -2.53
EIF3EP60228 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.74□□□□□ -2.53
EIF3EP60228 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.74□□□□□ -2.53
EIF3EP60228 MIR519E-201ENST00000385075 84 ntBASIC-0.74□□□□□ -2.53
EIF3EP60228 RNU6-493P-201ENST00000391321 108 ntBASIC-0.74□□□□□ -2.53
EIF3EP60228 RNU7-2P-201ENST00000516096 62 ntBASIC-0.74□□□□□ -2.53
EIF3EP60228 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.74□□□□□ -2.53
EIF3EP60228 MIR8062-201ENST00000621515 85 ntBASIC-0.74□□□□□ -2.53
EIF3EP60228 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms