Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 MIR1257-201ENST00000408490 117 ntBASIC1.28□□□□□ -2.2
CLRN1P58418 AC002429.1-201ENST00000437672 148 ntBASIC1.28□□□□□ -2.2
CLRN1P58418 RNU6-795P-201ENST00000516323 103 ntBASIC1.28□□□□□ -2.2
CLRN1P58418 RNU7-40P-201ENST00000516397 64 ntBASIC1.28□□□□□ -2.2
CLRN1P58418 MIR4771-2-201ENST00000577758 74 ntBASIC1.28□□□□□ -2.2
CLRN1P58418 MIR4491-201ENST00000581087 68 ntBASIC1.28□□□□□ -2.2
CLRN1P58418 MIR4771-1-201ENST00000582617 74 ntBASIC1.28□□□□□ -2.2
CLRN1P58418 AC091304.10-201ENST00000641554 121 ntBASIC1.28□□□□□ -2.2
CLRN1P58418 Y_RNA.338-201ENST00000365320 114 ntBASIC1.27□□□□□ -2.21
CLRN1P58418 RNU6-994P-201ENST00000410507 111 ntBASIC1.27□□□□□ -2.21
CLRN1P58418 RPS26P5-201ENST00000418544 335 ntBASIC1.27□□□□□ -2.21
CLRN1P58418 MIR4781-201ENST00000585250 76 ntBASIC1.27□□□□□ -2.21
CLRN1P58418 AL645939.4-201ENST00000604495 135 ntBASIC1.27□□□□□ -2.21
CLRN1P58418 AC020891.4-201ENST00000605745 93 ntBASIC1.27□□□□□ -2.21
CLRN1P58418 AC012531.4-201ENST00000616509 177 ntBASIC1.27□□□□□ -2.21
CLRN1P58418 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CLRN1P58418 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.27□□□□□ -2.21
CLRN1P58418 RNU6-170P-201ENST00000362832 104 ntBASIC1.26□□□□□ -2.21
CLRN1P58418 Y_RNA.93-201ENST00000363066 109 ntBASIC1.26□□□□□ -2.21
CLRN1P58418 RNU6-403P-201ENST00000363163 104 ntBASIC1.26□□□□□ -2.21
CLRN1P58418 Y_RNA.119-201ENST00000363301 96 ntBASIC1.26□□□□□ -2.21
CLRN1P58418 SNORD45B-201ENST00000364617 72 ntBASIC1.26□□□□□ -2.21
CLRN1P58418 SNORD26-201ENST00000384147 75 ntBASIC1.26□□□□□ -2.21
CLRN1P58418 RNU6-905P-201ENST00000384434 107 ntBASIC1.26□□□□□ -2.21
CLRN1P58418 SNORA40.13-201ENST00000516379 120 ntBASIC1.26□□□□□ -2.21
CLRN1P58418 RNU1-92P-201ENST00000517017 135 ntBASIC1.26□□□□□ -2.21
CLRN1P58418 AC090897.1-201ENST00000580909 226 ntBASIC1.26□□□□□ -2.21
CLRN1P58418 MIR548Z-201ENST00000584743 97 ntBASIC1.26□□□□□ -2.21
CLRN1P58418 MIR378A-201ENST00000362177 66 ntBASIC1.25□□□□□ -2.21
CLRN1P58418 Y_RNA.107-201ENST00000363190 121 ntBASIC1.25□□□□□ -2.21
CLRN1P58418 RNU6-640P-201ENST00000363693 105 ntBASIC1.25□□□□□ -2.21
CLRN1P58418 SNORD38.2-201ENST00000384470 69 ntBASIC1.25□□□□□ -2.21
CLRN1P58418 SNORA72.6-201ENST00000384520 129 ntBASIC1.25□□□□□ -2.21
CLRN1P58418 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CLRN1P58418 RNU4-83P-201ENST00000410863 133 ntBASIC1.25□□□□□ -2.21
CLRN1P58418 SPINT5P-201ENST00000448174 155 ntBASIC1.25□□□□□ -2.21
CLRN1P58418 SNORA25.16-201ENST00000516741 121 ntBASIC1.25□□□□□ -2.21
CLRN1P58418 MIR4500-201ENST00000579472 76 ntBASIC1.25□□□□□ -2.21
CLRN1P58418 RNU6-1298P-201ENST00000362456 101 ntBASIC1.24□□□□□ -2.21
CLRN1P58418 Y_RNA.95-201ENST00000363079 95 ntBASIC1.24□□□□□ -2.21
CLRN1P58418 MIR548G-201ENST00000408442 89 ntBASIC1.24□□□□□ -2.21
CLRN1P58418 MTATP8P2-201ENST00000435212 202 ntBASIC1.24□□□□□ -2.21
CLRN1P58418 AC109327.2-201ENST00000448339 378 ntBASIC1.24□□□□□ -2.21
CLRN1P58418 RNU6-531P-201ENST00000516694 104 ntBASIC1.24□□□□□ -2.21
CLRN1P58418 MTND5P40-201ENST00000559945 246 ntBASIC1.24□□□□□ -2.21
CLRN1P58418 MIR4777-201ENST00000583710 86 ntBASIC1.24□□□□□ -2.21
CLRN1P58418 RNU6-90P-201ENST00000606352 106 ntBASIC1.24□□□□□ -2.21
CLRN1P58418 AC027335.2-201ENST00000624030 375 ntBASIC1.24□□□□□ -2.21
CLRN1P58418 MIR337-201ENST00000362281 93 ntBASIC1.23□□□□□ -2.21
CLRN1P58418 Y_RNA.466-201ENST00000384294 113 ntBASIC1.23□□□□□ -2.21
CLRN1P58418 Y_RNA.467-201ENST00000384297 102 ntBASIC1.23□□□□□ -2.21
CLRN1P58418 MIR125B2-201ENST00000385128 89 ntBASIC1.23□□□□□ -2.21
CLRN1P58418 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.23□□□□□ -2.21
CLRN1P58418 AC004941.2-201ENST00000427009 228 ntBASIC1.23□□□□□ -2.21
CLRN1P58418 AC108667.1-201ENST00000428618 249 ntBASIC1.23□□□□□ -2.21
CLRN1P58418 RNU6-158P-201ENST00000517104 100 ntBASIC1.23□□□□□ -2.21
CLRN1P58418 AC019288.1-201ENST00000557918 224 ntBASIC1.23□□□□□ -2.21
CLRN1P58418 MIR4303-201ENST00000581299 66 ntBASIC1.23□□□□□ -2.21
CLRN1P58418 MIR4676-201ENST00000583078 72 ntBASIC1.23□□□□□ -2.21
CLRN1P58418 AL512598.1-201ENST00000610158 273 ntBASIC1.23□□□□□ -2.21
CLRN1P58418 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.23□□□□□ -2.21
CLRN1P58418 ZNF209P-201ENST00000593450 2304 ntBASIC1.23□□□□□ -2.21
CLRN1P58418 RNU6-369P-201ENST00000362515 102 ntBASIC1.22□□□□□ -2.21
CLRN1P58418 RNU6-1163P-201ENST00000364516 107 ntBASIC1.22□□□□□ -2.21
CLRN1P58418 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CLRN1P58418 AL603825.1-201ENST00000438481 80 ntBASIC1.22□□□□□ -2.21
CLRN1P58418 RPS29P23-201ENST00000458635 123 ntBASIC1.22□□□□□ -2.21
CLRN1P58418 RNA5SP61-201ENST00000516453 100 ntBASIC1.22□□□□□ -2.21
CLRN1P58418 MIR2052-201ENST00000636055 55 ntBASIC1.22□□□□□ -2.21
CLRN1P58418 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CLRN1P58418 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CLRN1P58418 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CLRN1P58418 HSBP1P2-201ENST00000299671 229 ntBASIC1.21□□□□□ -2.22
CLRN1P58418 MIR26B-201ENST00000362251 77 ntBASIC1.21□□□□□ -2.22
CLRN1P58418 Y_RNA.13-201ENST00000362403 112 ntBASIC1.21□□□□□ -2.22
CLRN1P58418 RNU6-53P-201ENST00000365367 106 ntBASIC1.21□□□□□ -2.22
CLRN1P58418 MIR100-201ENST00000385259 80 ntBASIC1.21□□□□□ -2.22
CLRN1P58418 RNU6-644P-201ENST00000391155 98 ntBASIC1.21□□□□□ -2.22
CLRN1P58418 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.21□□□□□ -2.22
CLRN1P58418 RNU6-1053P-201ENST00000515930 101 ntBASIC1.21□□□□□ -2.22
CLRN1P58418 RNU7-156P-201ENST00000517214 74 ntBASIC1.21□□□□□ -2.22
CLRN1P58418 RNU6-86P-201ENST00000606534 107 ntBASIC1.21□□□□□ -2.22
CLRN1P58418 MIR1-1-201ENST00000362147 71 ntBASIC1.2□□□□□ -2.22
CLRN1P58418 RNU4-58P-201ENST00000363192 141 ntBASIC1.2□□□□□ -2.22
CLRN1P58418 Y_RNA.567-201ENST00000384736 106 ntBASIC1.2□□□□□ -2.22
CLRN1P58418 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.2□□□□□ -2.22
CLRN1P58418 RNY4P30-201ENST00000410216 95 ntBASIC1.2□□□□□ -2.22
CLRN1P58418 BX276092.1-201ENST00000427368 251 ntBASIC1.2□□□□□ -2.22
CLRN1P58418 AC067940.1-201ENST00000458411 300 ntBASIC1.2□□□□□ -2.22
CLRN1P58418 RNU7-61P-201ENST00000515897 61 ntBASIC1.2□□□□□ -2.22
CLRN1P58418 RNU6-977P-201ENST00000516411 103 ntBASIC1.2□□□□□ -2.22
CLRN1P58418 Y_RNA.694-201ENST00000516677 117 ntBASIC1.2□□□□□ -2.22
CLRN1P58418 RNA5SP170-201ENST00000517150 101 ntBASIC1.2□□□□□ -2.22
CLRN1P58418 MIR4439-201ENST00000583746 80 ntBASIC1.2□□□□□ -2.22
CLRN1P58418 MIR6082-201ENST00000613604 109 ntBASIC1.2□□□□□ -2.22
CLRN1P58418 MIR8066-201ENST00000617280 78 ntBASIC1.2□□□□□ -2.22
CLRN1P58418 Y_RNA.173-201ENST00000363776 113 ntBASIC1.19□□□□□ -2.22
CLRN1P58418 MIR19B1-201ENST00000384829 87 ntBASIC1.19□□□□□ -2.22
CLRN1P58418 MIR938-201ENST00000401216 83 ntBASIC1.19□□□□□ -2.22
CLRN1P58418 MIR4498-201ENST00000577599 66 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 238.6 ms