Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SNORA72.6-201ENST00000384520 129 ntBASIC0.7□□□□□ -2.3
CLDN2P57739 Y_RNA.586-201ENST00000391146 98 ntBASIC0.7□□□□□ -2.3
CLDN2P57739 MIR1263-201ENST00000408324 86 ntBASIC0.7□□□□□ -2.3
CLDN2P57739 MIR1270-201ENST00000459320 83 ntBASIC0.7□□□□□ -2.3
CLDN2P57739 AC002350.1-201ENST00000490759 375 ntBASIC0.7□□□□□ -2.3
CLDN2P57739 RNA5SP480-201ENST00000516840 109 ntBASIC0.7□□□□□ -2.3
CLDN2P57739 MIR3612-201ENST00000579753 87 ntBASIC0.7□□□□□ -2.3
CLDN2P57739 AL359881.1-201ENST00000602916 267 ntBASIC0.7□□□□□ -2.3
CLDN2P57739 RNA5SP222-201ENST00000411039 105 ntBASIC0.69□□□□□ -2.3
CLDN2P57739 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.69□□□□□ -2.3
CLDN2P57739 RNU6-235P-201ENST00000362644 107 ntBASIC0.68□□□□□ -2.3
CLDN2P57739 RNU4-58P-201ENST00000363192 141 ntBASIC0.68□□□□□ -2.3
CLDN2P57739 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
CLDN2P57739 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
CLDN2P57739 RNA5SP133-201ENST00000363368 119 ntBASIC0.67□□□□□ -2.3
CLDN2P57739 RNY1P2-201ENST00000364820 117 ntBASIC0.67□□□□□ -2.3
CLDN2P57739 SNORD58C-201ENST00000365223 64 ntBASIC0.67□□□□□ -2.3
CLDN2P57739 RNA5SP117-201ENST00000365294 118 ntBASIC0.67□□□□□ -2.3
CLDN2P57739 Y_RNA.528-201ENST00000384575 108 ntBASIC0.67□□□□□ -2.3
CLDN2P57739 MIR146A-201ENST00000385201 99 ntBASIC0.67□□□□□ -2.3
CLDN2P57739 MIRLET7F2-201ENST00000385277 83 ntBASIC0.67□□□□□ -2.3
CLDN2P57739 MIR548M-201ENST00000408260 86 ntBASIC0.67□□□□□ -2.3
CLDN2P57739 RNU6-1211P-201ENST00000459179 105 ntBASIC0.67□□□□□ -2.3
CLDN2P57739 RNU6-781P-201ENST00000516377 101 ntBASIC0.67□□□□□ -2.3
CLDN2P57739 RNU6-1061P-201ENST00000516530 99 ntBASIC0.67□□□□□ -2.3
CLDN2P57739 RNU7-6P-201ENST00000516845 62 ntBASIC0.67□□□□□ -2.3
CLDN2P57739 DEFB131E-201ENST00000532329 154 ntBASIC0.67□□□□□ -2.3
CLDN2P57739 U6.109-201ENST00000636749 87 ntBASIC0.67□□□□□ -2.3
CLDN2P57739 HSBP1P2-201ENST00000299671 229 ntBASIC0.66□□□□□ -2.3
CLDN2P57739 MIR18A-201ENST00000362310 71 ntBASIC0.66□□□□□ -2.3
CLDN2P57739 SNORD115-19-201ENST00000363098 82 ntBASIC0.66□□□□□ -2.3
CLDN2P57739 RNU6-774P-201ENST00000363238 107 ntBASIC0.66□□□□□ -2.3
CLDN2P57739 SNORD115-18-201ENST00000363293 82 ntBASIC0.66□□□□□ -2.3
CLDN2P57739 RNU6-704P-201ENST00000364162 103 ntBASIC0.66□□□□□ -2.3
CLDN2P57739 SNORD115-17-201ENST00000364612 82 ntBASIC0.66□□□□□ -2.3
CLDN2P57739 MIR206-201ENST00000384872 86 ntBASIC0.66□□□□□ -2.3
CLDN2P57739 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
CLDN2P57739 RNU7-2P-201ENST00000516096 62 ntBASIC0.66□□□□□ -2.3
CLDN2P57739 SNORA25.16-201ENST00000516741 121 ntBASIC0.66□□□□□ -2.3
CLDN2P57739 AC138749.4-201ENST00000563970 127 ntBASIC0.66□□□□□ -2.3
CLDN2P57739 AC025166.1-201ENST00000612411 163 ntBASIC0.66□□□□□ -2.3
CLDN2P57739 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.66□□□□□ -2.3
CLDN2P57739 Y_RNA.174-201ENST00000363781 105 ntBASIC0.65□□□□□ -2.31
CLDN2P57739 Y_RNA.346-201ENST00000365385 112 ntBASIC0.65□□□□□ -2.31
CLDN2P57739 RNU6-80P-201ENST00000384195 107 ntBASIC0.65□□□□□ -2.31
CLDN2P57739 AC105081.1-201ENST00000617727 106 ntBASIC0.65□□□□□ -2.31
CLDN2P57739 AC087741.2-201ENST00000619415 172 ntBASIC0.65□□□□□ -2.31
CLDN2P57739 MIR6513-201ENST00000621188 64 ntBASIC0.65□□□□□ -2.31
CLDN2P57739 Y_RNA.98-201ENST00000363109 102 ntBASIC0.64□□□□□ -2.31
CLDN2P57739 SNORD115-35-201ENST00000365122 82 ntBASIC0.64□□□□□ -2.31
CLDN2P57739 SNORA36.2-201ENST00000384004 127 ntBASIC0.64□□□□□ -2.31
CLDN2P57739 RNU6-616P-201ENST00000384353 107 ntBASIC0.64□□□□□ -2.31
CLDN2P57739 MIR7-2-201ENST00000384970 110 ntBASIC0.64□□□□□ -2.31
CLDN2P57739 MT-TI-201ENST00000387365 69 ntBASIC0.64□□□□□ -2.31
CLDN2P57739 RNU6-1321P-201ENST00000390905 107 ntBASIC0.64□□□□□ -2.31
CLDN2P57739 RNU7-48P-201ENST00000458875 63 ntBASIC0.64□□□□□ -2.31
CLDN2P57739 RNU6-772P-201ENST00000516042 105 ntBASIC0.64□□□□□ -2.31
CLDN2P57739 RNU6-531P-201ENST00000516694 104 ntBASIC0.64□□□□□ -2.31
CLDN2P57739 Y_RNA.697-201ENST00000516776 113 ntBASIC0.64□□□□□ -2.31
CLDN2P57739 RNU6-971P-201ENST00000516920 106 ntBASIC0.64□□□□□ -2.31
CLDN2P57739 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.64□□□□□ -2.31
CLDN2P57739 Y_RNA.119-201ENST00000363301 96 ntBASIC0.63□□□□□ -2.31
CLDN2P57739 Y_RNA.448-201ENST00000384185 108 ntBASIC0.63□□□□□ -2.31
CLDN2P57739 RNU6-429P-201ENST00000384582 108 ntBASIC0.63□□□□□ -2.31
CLDN2P57739 Y_RNA.536-201ENST00000384621 113 ntBASIC0.63□□□□□ -2.31
CLDN2P57739 MIR216A-201ENST00000385063 110 ntBASIC0.63□□□□□ -2.31
CLDN2P57739 MIR140-201ENST00000385282 100 ntBASIC0.63□□□□□ -2.31
CLDN2P57739 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.63□□□□□ -2.31
CLDN2P57739 RNU6-135P-201ENST00000516769 101 ntBASIC0.63□□□□□ -2.31
CLDN2P57739 MTND5P18-201ENST00000445624 1801 ntBASIC0.62□□□□□ -2.31
CLDN2P57739 Y_RNA.36-201ENST00000362602 112 ntBASIC0.62□□□□□ -2.31
CLDN2P57739 SNORD114-26-201ENST00000363543 72 ntBASIC0.62□□□□□ -2.31
CLDN2P57739 RNY4P6-201ENST00000363667 96 ntBASIC0.62□□□□□ -2.31
CLDN2P57739 RNU6-187P-201ENST00000384139 106 ntBASIC0.62□□□□□ -2.31
CLDN2P57739 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.62□□□□□ -2.31
CLDN2P57739 AL606490.4-201ENST00000423117 127 ntBASIC0.62□□□□□ -2.31
CLDN2P57739 RNU6-469P-201ENST00000516253 101 ntBASIC0.62□□□□□ -2.31
CLDN2P57739 MIR101-2-201ENST00000362195 79 ntBASIC0.61□□□□□ -2.31
CLDN2P57739 RNU6-865P-201ENST00000364772 107 ntBASIC0.61□□□□□ -2.31
CLDN2P57739 RNY1P4-201ENST00000384595 115 ntBASIC0.61□□□□□ -2.31
CLDN2P57739 RNU6-291P-201ENST00000384720 107 ntBASIC0.61□□□□□ -2.31
CLDN2P57739 RNU6-535P-201ENST00000384722 107 ntBASIC0.61□□□□□ -2.31
CLDN2P57739 MIR548D2-201ENST00000384955 97 ntBASIC0.61□□□□□ -2.31
CLDN2P57739 MIR936-201ENST00000401264 98 ntBASIC0.61□□□□□ -2.31
CLDN2P57739 AC098934.3-201ENST00000430450 190 ntBASIC0.61□□□□□ -2.31
CLDN2P57739 RNU6-1234P-201ENST00000516877 103 ntBASIC0.61□□□□□ -2.31
CLDN2P57739 RN7SL793P-201ENST00000583259 296 ntBASIC0.61□□□□□ -2.31
CLDN2P57739 uc_338.16-201ENST00000621804 95 ntBASIC0.61□□□□□ -2.31
CLDN2P57739 AP001362.1-201ENST00000625165 124 ntBASIC0.61□□□□□ -2.31
CLDN2P57739 AL157777.2-201ENST00000258070 137 ntBASIC0.6□□□□□ -2.31
CLDN2P57739 RNA5SP499-201ENST00000363982 119 ntBASIC0.6□□□□□ -2.31
CLDN2P57739 Y_RNA.328-201ENST00000365208 113 ntBASIC0.6□□□□□ -2.31
CLDN2P57739 Y_RNA.712-201ENST00000517011 92 ntBASIC0.6□□□□□ -2.31
CLDN2P57739 AC018659.1-201ENST00000551083 169 ntBASIC0.6□□□□□ -2.31
CLDN2P57739 MTND5P34-201ENST00000568888 325 ntBASIC0.6□□□□□ -2.31
CLDN2P57739 MIR6779-201ENST00000617283 64 ntBASIC0.6□□□□□ -2.31
CLDN2P57739 Y_RNA.56-201ENST00000362798 112 ntBASIC0.59□□□□□ -2.31
CLDN2P57739 MIR3678-201ENST00000578455 94 ntBASIC0.59□□□□□ -2.31
CLDN2P57739 RNA5SP347-201ENST00000362445 119 ntBASIC0.58□□□□□ -2.32
CLDN2P57739 Y_RNA.32-201ENST00000362589 110 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms