Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RNY1P2-201ENST00000364820 117 ntBASIC0.05□□□□□ -2.4
LIM2P55344 Y_RNA.307-201ENST00000365022 117 ntBASIC0.05□□□□□ -2.4
LIM2P55344 Y_RNA.362-201ENST00000365518 110 ntBASIC0.05□□□□□ -2.4
LIM2P55344 RNU6-47P-201ENST00000383866 107 ntBASIC0.05□□□□□ -2.4
LIM2P55344 SNORA32-201ENST00000384072 121 ntBASIC0.05□□□□□ -2.4
LIM2P55344 RNU6-196P-201ENST00000384315 107 ntBASIC0.05□□□□□ -2.4
LIM2P55344 MIR1197-201ENST00000408818 88 ntBASIC0.05□□□□□ -2.4
LIM2P55344 RNU2-35P-201ENST00000516446 142 ntBASIC0.05□□□□□ -2.4
LIM2P55344 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
LIM2P55344 U6.109-201ENST00000636749 87 ntBASIC0.05□□□□□ -2.4
LIM2P55344 MIR6844-201ENST00000637122 62 ntBASIC0.05□□□□□ -2.4
LIM2P55344 Y_RNA.119-201ENST00000363301 96 ntBASIC0.04□□□□□ -2.4
LIM2P55344 RNU7-121P-201ENST00000516604 62 ntBASIC0.04□□□□□ -2.4
LIM2P55344 SNORD67.1-201ENST00000516618 108 ntBASIC0.04□□□□□ -2.4
LIM2P55344 AC138869.1-201ENST00000568623 124 ntBASIC0.04□□□□□ -2.4
LIM2P55344 AC138907.4-201ENST00000570107 226 ntBASIC0.04□□□□□ -2.4
LIM2P55344 MIR548H5-201ENST00000580314 60 ntBASIC0.04□□□□□ -2.4
LIM2P55344 MIR4743-201ENST00000584576 69 ntBASIC0.04□□□□□ -2.4
LIM2P55344 AL359881.1-201ENST00000602916 267 ntBASIC0.04□□□□□ -2.4
LIM2P55344 AL109933.3-201ENST00000619095 188 ntBASIC0.04□□□□□ -2.4
LIM2P55344 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
LIM2P55344 RNU6-1318P-201ENST00000365389 103 ntBASIC0.03□□□□□ -2.4
LIM2P55344 RNU6-429P-201ENST00000384582 108 ntBASIC0.03□□□□□ -2.4
LIM2P55344 RNU6-239P-201ENST00000390990 99 ntBASIC0.03□□□□□ -2.4
LIM2P55344 Y_RNA.793-201ENST00000411222 111 ntBASIC0.03□□□□□ -2.4
LIM2P55344 Y_RNA.660-201ENST00000516002 120 ntBASIC0.03□□□□□ -2.4
LIM2P55344 RNU6-1219P-201ENST00000516143 112 ntBASIC0.03□□□□□ -2.4
LIM2P55344 AC021443.1-201ENST00000604478 211 ntBASIC0.03□□□□□ -2.4
LIM2P55344 AC072026.1-201ENST00000605023 201 ntBASIC0.03□□□□□ -2.4
LIM2P55344 RNA5SP214-201ENST00000363378 118 ntBASIC0.02□□□□□ -2.41
LIM2P55344 SNORA63.5-201ENST00000363548 123 ntBASIC0.02□□□□□ -2.41
LIM2P55344 Y_RNA.423-201ENST00000384057 113 ntBASIC0.02□□□□□ -2.41
LIM2P55344 RNU4-69P-201ENST00000410677 143 ntBASIC0.02□□□□□ -2.41
LIM2P55344 RNU6-240P-201ENST00000516098 97 ntBASIC0.02□□□□□ -2.41
LIM2P55344 RNU2-60P-201ENST00000517290 128 ntBASIC0.02□□□□□ -2.41
LIM2P55344 AC141557.1-201ENST00000540982 400 ntBASIC0.02□□□□□ -2.41
LIM2P55344 SNORD115-24-201ENST00000363528 82 ntBASIC0.01□□□□□ -2.41
LIM2P55344 RNU6-187P-201ENST00000384139 106 ntBASIC0.01□□□□□ -2.41
LIM2P55344 PCNPP3-201ENST00000393579 471 ntBASIC0.01□□□□□ -2.41
LIM2P55344 RNU6-588P-201ENST00000410281 105 ntBASIC0.01□□□□□ -2.41
LIM2P55344 RNU7-164P-201ENST00000459221 62 ntBASIC0.01□□□□□ -2.41
LIM2P55344 Y_RNA.49-201ENST00000362714 112 ntBASIC0□□□□□ -2.41
LIM2P55344 RNU4-84P-201ENST00000364200 139 ntBASIC0□□□□□ -2.41
LIM2P55344 RNU6-726P-201ENST00000364680 107 ntBASIC0□□□□□ -2.41
LIM2P55344 SNORD18B-201ENST00000365659 72 ntBASIC0□□□□□ -2.41
LIM2P55344 SNORA2A-201ENST00000383885 135 ntBASIC0□□□□□ -2.41
LIM2P55344 RNU6-463P-201ENST00000384340 107 ntBASIC0□□□□□ -2.41
LIM2P55344 Y_RNA.489-201ENST00000384410 101 ntBASIC0□□□□□ -2.41
LIM2P55344 MIR892B-201ENST00000401279 77 ntBASIC0□□□□□ -2.41
LIM2P55344 AC130289.1-201ENST00000577321 73 ntBASIC0□□□□□ -2.41
LIM2P55344 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
LIM2P55344 MIR5706-201ENST00000579841 80 ntBASIC0□□□□□ -2.41
LIM2P55344 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.01□□□□□ -2.41
LIM2P55344 RNA5SP128-201ENST00000365305 116 ntBASIC-0.01□□□□□ -2.41
LIM2P55344 MIR610-201ENST00000385139 96 ntBASIC-0.01□□□□□ -2.41
LIM2P55344 MIR760-201ENST00000390220 80 ntBASIC-0.01□□□□□ -2.41
LIM2P55344 AL603914.1-201ENST00000401964 204 ntBASIC-0.01□□□□□ -2.41
LIM2P55344 MIR1270-201ENST00000459320 83 ntBASIC-0.01□□□□□ -2.41
LIM2P55344 RNU7-123P-201ENST00000515911 60 ntBASIC-0.01□□□□□ -2.41
LIM2P55344 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.01□□□□□ -2.41
LIM2P55344 AC104408.1-201ENST00000605241 170 ntBASIC-0.01□□□□□ -2.41
LIM2P55344 AC105081.1-201ENST00000617727 106 ntBASIC-0.01□□□□□ -2.41
LIM2P55344 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
LIM2P55344 RNU6-127P-201ENST00000390897 107 ntBASIC-0.02□□□□□ -2.41
LIM2P55344 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.02□□□□□ -2.41
LIM2P55344 SNORD77B-201ENST00000391112 67 ntBASIC-0.02□□□□□ -2.41
LIM2P55344 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.02□□□□□ -2.41
LIM2P55344 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.02□□□□□ -2.41
LIM2P55344 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.02□□□□□ -2.41
LIM2P55344 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.02□□□□□ -2.41
LIM2P55344 MIR4290-201ENST00000583807 95 ntBASIC-0.02□□□□□ -2.41
LIM2P55344 RNU1-29P-201ENST00000606574 126 ntBASIC-0.02□□□□□ -2.41
LIM2P55344 U7.6-201ENST00000610841 64 ntBASIC-0.02□□□□□ -2.41
LIM2P55344 AL162376.1-201ENST00000624117 175 ntBASIC-0.02□□□□□ -2.41
LIM2P55344 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.03□□□□□ -2.41
LIM2P55344 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.03□□□□□ -2.41
LIM2P55344 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.03□□□□□ -2.41
LIM2P55344 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.03□□□□□ -2.41
LIM2P55344 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.03□□□□□ -2.41
LIM2P55344 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.03□□□□□ -2.41
LIM2P55344 RNU7-161P-201ENST00000517289 62 ntBASIC-0.03□□□□□ -2.41
LIM2P55344 AC022559.1-201ENST00000520905 205 ntBASIC-0.03□□□□□ -2.41
LIM2P55344 MIR5190-201ENST00000581537 80 ntBASIC-0.03□□□□□ -2.41
LIM2P55344 RNA5SP403-201ENST00000363598 108 ntBASIC-0.04□□□□□ -2.42
LIM2P55344 RNA5SP325-201ENST00000363756 130 ntBASIC-0.04□□□□□ -2.42
LIM2P55344 RNU6-309P-201ENST00000364573 106 ntBASIC-0.04□□□□□ -2.42
LIM2P55344 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.04□□□□□ -2.42
LIM2P55344 RNU6-449P-201ENST00000383914 107 ntBASIC-0.04□□□□□ -2.42
LIM2P55344 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.04□□□□□ -2.42
LIM2P55344 MIR206-201ENST00000384872 86 ntBASIC-0.04□□□□□ -2.42
LIM2P55344 MIR519A1-201ENST00000385257 85 ntBASIC-0.04□□□□□ -2.42
LIM2P55344 SNORD37.2-201ENST00000391075 66 ntBASIC-0.04□□□□□ -2.42
LIM2P55344 MIR548I2-201ENST00000408348 149 ntBASIC-0.04□□□□□ -2.42
LIM2P55344 RNU7-48P-201ENST00000458875 63 ntBASIC-0.04□□□□□ -2.42
LIM2P55344 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.04□□□□□ -2.42
LIM2P55344 RNU6-782P-201ENST00000516852 104 ntBASIC-0.04□□□□□ -2.42
LIM2P55344 AC141273.2-201ENST00000618989 130 ntBASIC-0.04□□□□□ -2.42
LIM2P55344 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.04□□□□□ -2.42
LIM2P55344 AC073869.9-201ENST00000641610 120 ntBASIC-0.04□□□□□ -2.42
LIM2P55344 RNA5SP257-201ENST00000363023 116 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms