Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 MIR548J-201ENST00000408833 112 ntBASIC1.26□□□□□ -2.21
TTC3P53804 AC048334.1-201ENST00000477975 159 ntBASIC1.26□□□□□ -2.21
TTC3P53804 MIR3664-201ENST00000579074 99 ntBASIC1.26□□□□□ -2.21
TTC3P53804 MIR151B-201ENST00000584249 96 ntBASIC1.26□□□□□ -2.21
TTC3P53804 MIR376B-201ENST00000614515 100 ntBASIC1.26□□□□□ -2.21
TTC3P53804 AC105081.1-201ENST00000617727 106 ntBASIC1.26□□□□□ -2.21
TTC3P53804 MT-TF-201ENST00000387314 71 ntBASIC1.25□□□□□ -2.21
TTC3P53804 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.25□□□□□ -2.21
TTC3P53804 RNU6-158P-201ENST00000517104 100 ntBASIC1.25□□□□□ -2.21
TTC3P53804 AL020996.3-201ENST00000606617 222 ntBASIC1.25□□□□□ -2.21
TTC3P53804 AL096861.1-201ENST00000610899 123 ntBASIC1.25□□□□□ -2.21
TTC3P53804 RNU6-42P-201ENST00000384165 107 ntBASIC1.25□□□□□ -2.21
TTC3P53804 RNA5SP237-201ENST00000410414 113 ntBASIC1.25□□□□□ -2.21
TTC3P53804 RNU6-955P-201ENST00000410497 104 ntBASIC1.25□□□□□ -2.21
TTC3P53804 AC138749.4-201ENST00000563970 127 ntBASIC1.25□□□□□ -2.21
TTC3P53804 MIR4422-201ENST00000581938 83 ntBASIC1.25□□□□□ -2.21
TTC3P53804 Y_RNA.190-201ENST00000363964 101 ntBASIC1.24□□□□□ -2.21
TTC3P53804 RNU6-49P-201ENST00000384256 107 ntBASIC1.24□□□□□ -2.21
TTC3P53804 MIR150-201ENST00000385048 84 ntBASIC1.24□□□□□ -2.21
TTC3P53804 MIR563-201ENST00000385080 79 ntBASIC1.24□□□□□ -2.21
TTC3P53804 RNU6-1006P-201ENST00000516998 103 ntBASIC1.24□□□□□ -2.21
TTC3P53804 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.24□□□□□ -2.21
TTC3P53804 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.24□□□□□ -2.21
TTC3P53804 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.24□□□□□ -2.21
TTC3P53804 RNU6-580P-201ENST00000365159 107 ntBASIC1.23□□□□□ -2.21
TTC3P53804 RNU6-205P-201ENST00000390858 107 ntBASIC1.23□□□□□ -2.21
TTC3P53804 MIR8063-201ENST00000621930 81 ntBASIC1.23□□□□□ -2.21
TTC3P53804 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TTC3P53804 MIR302D-201ENST00000362275 68 ntBASIC1.23□□□□□ -2.21
TTC3P53804 SNORD113.3-201ENST00000364630 78 ntBASIC1.23□□□□□ -2.21
TTC3P53804 SNORD58A-201ENST00000383875 65 ntBASIC1.23□□□□□ -2.21
TTC3P53804 MIR450A2-201ENST00000385022 100 ntBASIC1.23□□□□□ -2.21
TTC3P53804 RNU1-78P-201ENST00000391248 165 ntBASIC1.23□□□□□ -2.21
TTC3P53804 AL161722.3-201ENST00000605789 2983 ntBASIC1.22□□□□□ -2.21
TTC3P53804 RNU4-38P-201ENST00000364472 129 ntBASIC1.22□□□□□ -2.21
TTC3P53804 RNU6-439P-201ENST00000384188 106 ntBASIC1.22□□□□□ -2.21
TTC3P53804 SNORD41-201ENST00000386967 70 ntBASIC1.22□□□□□ -2.21
TTC3P53804 MIR676-201ENST00000390702 67 ntBASIC1.22□□□□□ -2.21
TTC3P53804 RNU6-679P-201ENST00000391003 106 ntBASIC1.22□□□□□ -2.21
TTC3P53804 RNU6-972P-201ENST00000391208 107 ntBASIC1.22□□□□□ -2.21
TTC3P53804 RNA5SP480-201ENST00000516840 109 ntBASIC1.22□□□□□ -2.21
TTC3P53804 AC015688.6-201ENST00000577737 104 ntBASIC1.22□□□□□ -2.21
TTC3P53804 RNU6-90P-201ENST00000606352 106 ntBASIC1.22□□□□□ -2.21
TTC3P53804 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.22□□□□□ -2.21
TTC3P53804 MIR377-201ENST00000362145 69 ntBASIC1.22□□□□□ -2.21
TTC3P53804 RNA5SP264-201ENST00000363115 107 ntBASIC1.22□□□□□ -2.21
TTC3P53804 Y_RNA.330-201ENST00000365230 109 ntBASIC1.22□□□□□ -2.21
TTC3P53804 Y_RNA.377-201ENST00000365644 108 ntBASIC1.22□□□□□ -2.21
TTC3P53804 Y_RNA.467-201ENST00000384297 102 ntBASIC1.22□□□□□ -2.21
TTC3P53804 SNORD38.2-201ENST00000384470 69 ntBASIC1.22□□□□□ -2.21
TTC3P53804 MIR4500-201ENST00000579472 76 ntBASIC1.22□□□□□ -2.21
TTC3P53804 MIR4491-201ENST00000581087 68 ntBASIC1.22□□□□□ -2.21
TTC3P53804 MIR373-201ENST00000362273 69 ntBASIC1.21□□□□□ -2.22
TTC3P53804 RNU6-616P-201ENST00000384353 107 ntBASIC1.21□□□□□ -2.22
TTC3P53804 Y_RNA.558-201ENST00000384685 113 ntBASIC1.21□□□□□ -2.22
TTC3P53804 RNU6-887P-201ENST00000410660 100 ntBASIC1.21□□□□□ -2.22
TTC3P53804 MIR18B-201ENST00000454574 71 ntBASIC1.21□□□□□ -2.22
TTC3P53804 MIR4777-201ENST00000583710 86 ntBASIC1.21□□□□□ -2.22
TTC3P53804 MIR6734-201ENST00000621166 68 ntBASIC1.21□□□□□ -2.22
TTC3P53804 SNORD38.1-201ENST00000363863 68 ntBASIC1.2□□□□□ -2.22
TTC3P53804 RN7SKP88-201ENST00000516847 250 ntBASIC1.2□□□□□ -2.22
TTC3P53804 MTND5P40-201ENST00000559945 246 ntBASIC1.2□□□□□ -2.22
TTC3P53804 MIR4439-201ENST00000583746 80 ntBASIC1.2□□□□□ -2.22
TTC3P53804 MIR4295-201ENST00000585286 85 ntBASIC1.2□□□□□ -2.22
TTC3P53804 7SK.8-201ENST00000612110 250 ntBASIC1.2□□□□□ -2.22
TTC3P53804 7SK.11-201ENST00000615477 250 ntBASIC1.2□□□□□ -2.22
TTC3P53804 7SK.13-201ENST00000622040 250 ntBASIC1.2□□□□□ -2.22
TTC3P53804 RNU6-910P-201ENST00000390844 107 ntBASIC1.2□□□□□ -2.22
TTC3P53804 AC027119.1-201ENST00000440877 241 ntBASIC1.2□□□□□ -2.22
TTC3P53804 RNU7-62P-201ENST00000458856 62 ntBASIC1.2□□□□□ -2.22
TTC3P53804 snoU13.9-201ENST00000458927 103 ntBASIC1.2□□□□□ -2.22
TTC3P53804 AC090897.1-201ENST00000580909 226 ntBASIC1.2□□□□□ -2.22
TTC3P53804 uc_338.6-201ENST00000613544 171 ntBASIC1.2□□□□□ -2.22
TTC3P53804 MIR6788-201ENST00000618842 66 ntBASIC1.2□□□□□ -2.22
TTC3P53804 Y_RNA.168-201ENST00000363740 102 ntBASIC1.19□□□□□ -2.22
TTC3P53804 RNU6-654P-201ENST00000364373 107 ntBASIC1.19□□□□□ -2.22
TTC3P53804 RNU6-865P-201ENST00000364772 107 ntBASIC1.19□□□□□ -2.22
TTC3P53804 Y_RNA.290-201ENST00000364879 114 ntBASIC1.19□□□□□ -2.22
TTC3P53804 SNORD111-201ENST00000408139 94 ntBASIC1.19□□□□□ -2.22
TTC3P53804 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.19□□□□□ -2.22
TTC3P53804 RNU7-137P-201ENST00000516788 62 ntBASIC1.19□□□□□ -2.22
TTC3P53804 Y_RNA.705-201ENST00000516862 110 ntBASIC1.19□□□□□ -2.22
TTC3P53804 AL078603.1-201ENST00000603824 313 ntBASIC1.19□□□□□ -2.22
TTC3P53804 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.18□□□□□ -2.22
TTC3P53804 HSBP1P2-201ENST00000299671 229 ntBASIC1.18□□□□□ -2.22
TTC3P53804 SNORD116-10-201ENST00000363791 102 ntBASIC1.18□□□□□ -2.22
TTC3P53804 SNORA32-201ENST00000384072 121 ntBASIC1.18□□□□□ -2.22
TTC3P53804 Y_RNA.448-201ENST00000384185 108 ntBASIC1.18□□□□□ -2.22
TTC3P53804 RNU6-364P-201ENST00000384387 107 ntBASIC1.18□□□□□ -2.22
TTC3P53804 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.18□□□□□ -2.22
TTC3P53804 RNU6-795P-201ENST00000516323 103 ntBASIC1.18□□□□□ -2.22
TTC3P53804 SNORA72.7-201ENST00000516349 94 ntBASIC1.18□□□□□ -2.22
TTC3P53804 RNU6-844P-201ENST00000517175 102 ntBASIC1.18□□□□□ -2.22
TTC3P53804 SNORD114-27-201ENST00000363766 70 ntBASIC1.18□□□□□ -2.22
TTC3P53804 Y_RNA.247-201ENST00000364500 92 ntBASIC1.18□□□□□ -2.22
TTC3P53804 SNORD116-22-201ENST00000384430 92 ntBASIC1.18□□□□□ -2.22
TTC3P53804 RNY1P7-201ENST00000384743 110 ntBASIC1.18□□□□□ -2.22
TTC3P53804 Y_RNA.659-201ENST00000515994 113 ntBASIC1.18□□□□□ -2.22
TTC3P53804 RNU6-109P-201ENST00000516364 107 ntBASIC1.18□□□□□ -2.22
TTC3P53804 RNU6-184P-201ENST00000516514 107 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 234.2 ms