Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-850P-201ENST00000516934 103 ntBASIC2.12□□□□□ -2.07
USP11P51784 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
USP11P51784 MIR8066-201ENST00000617280 78 ntBASIC2.12□□□□□ -2.07
USP11P51784 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
USP11P51784 SNORA26.9-201ENST00000391322 122 ntBASIC2.11□□□□□ -2.07
USP11P51784 SUMO2P12-201ENST00000405924 140 ntBASIC2.11□□□□□ -2.07
USP11P51784 RNA5SP458-201ENST00000516188 119 ntBASIC2.11□□□□□ -2.07
USP11P51784 SNORA25.13-201ENST00000516395 103 ntBASIC2.11□□□□□ -2.07
USP11P51784 MIR4299-201ENST00000577899 72 ntBASIC2.11□□□□□ -2.07
USP11P51784 AP000753.3-201ENST00000604083 169 ntBASIC2.11□□□□□ -2.07
USP11P51784 uc_338.6-201ENST00000613544 171 ntBASIC2.11□□□□□ -2.07
USP11P51784 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USP11P51784 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USP11P51784 RNU6-478P-201ENST00000363904 110 ntBASIC2.1□□□□□ -2.07
USP11P51784 BX276092.1-201ENST00000427368 251 ntBASIC2.1□□□□□ -2.07
USP11P51784 SNORA77B-201ENST00000578179 125 ntBASIC2.1□□□□□ -2.07
USP11P51784 U6.109-201ENST00000636749 87 ntBASIC2.1□□□□□ -2.07
USP11P51784 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
USP11P51784 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
USP11P51784 Y_RNA.57-201ENST00000362806 113 ntBASIC2.09□□□□□ -2.07
USP11P51784 Y_RNA.119-201ENST00000363301 96 ntBASIC2.09□□□□□ -2.07
USP11P51784 SNORD115-37-201ENST00000363768 82 ntBASIC2.09□□□□□ -2.07
USP11P51784 MIR583-201ENST00000384846 75 ntBASIC2.09□□□□□ -2.07
USP11P51784 SNORA40.18-201ENST00000391200 128 ntBASIC2.09□□□□□ -2.07
USP11P51784 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.09□□□□□ -2.07
USP11P51784 RNA5SP364-201ENST00000516938 78 ntBASIC2.09□□□□□ -2.07
USP11P51784 AP003716.2-201ENST00000528260 108 ntBASIC2.09□□□□□ -2.07
USP11P51784 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
USP11P51784 RNU4-32P-201ENST00000363404 141 ntBASIC2.08□□□□□ -2.08
USP11P51784 MIR1236-201ENST00000408340 102 ntBASIC2.08□□□□□ -2.08
USP11P51784 AL450471.1-201ENST00000447509 127 ntBASIC2.08□□□□□ -2.08
USP11P51784 RNU6-250P-201ENST00000516958 103 ntBASIC2.08□□□□□ -2.08
USP11P51784 AC015688.6-201ENST00000577737 104 ntBASIC2.08□□□□□ -2.08
USP11P51784 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.08□□□□□ -2.08
USP11P51784 SNORA4-201ENST00000584302 138 ntBASIC2.08□□□□□ -2.08
USP11P51784 AL512598.1-201ENST00000610158 273 ntBASIC2.08□□□□□ -2.08
USP11P51784 RNU6-624P-201ENST00000363411 107 ntBASIC2.07□□□□□ -2.08
USP11P51784 RNU6-396P-201ENST00000365369 105 ntBASIC2.07□□□□□ -2.08
USP11P51784 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
USP11P51784 RNU6-205P-201ENST00000390858 107 ntBASIC2.07□□□□□ -2.08
USP11P51784 RNU6-1165P-201ENST00000410119 107 ntBASIC2.07□□□□□ -2.08
USP11P51784 RNA5SP489-201ENST00000410986 109 ntBASIC2.07□□□□□ -2.08
USP11P51784 HMGN2P19-201ENST00000425149 265 ntBASIC2.07□□□□□ -2.08
USP11P51784 AC073261.1-201ENST00000429409 121 ntBASIC2.07□□□□□ -2.08
USP11P51784 MIR6845-201ENST00000613182 61 ntBASIC2.07□□□□□ -2.08
USP11P51784 AC008163.1-202ENST00000636004 2889 ntBASIC2.06□□□□□ -2.08
USP11P51784 SNORA16.1-201ENST00000364597 132 ntBASIC2.06□□□□□ -2.08
USP11P51784 RNU6-571P-201ENST00000384128 107 ntBASIC2.06□□□□□ -2.08
USP11P51784 MIR9-3-201ENST00000385084 90 ntBASIC2.06□□□□□ -2.08
USP11P51784 RNU6-129P-201ENST00000391022 107 ntBASIC2.06□□□□□ -2.08
USP11P51784 AC003989.2-201ENST00000440224 169 ntBASIC2.06□□□□□ -2.08
USP11P51784 snoU13.11-201ENST00000459219 104 ntBASIC2.06□□□□□ -2.08
USP11P51784 RN7SL274P-201ENST00000492268 272 ntBASIC2.06□□□□□ -2.08
USP11P51784 MIR6516-201ENST00000630554 81 ntBASIC2.06□□□□□ -2.08
USP11P51784 RNU6-315P-201ENST00000362666 107 ntBASIC2.05□□□□□ -2.08
USP11P51784 AC245517.4-201ENST00000448601 281 ntBASIC2.05□□□□□ -2.08
USP11P51784 HSPE1P24-201ENST00000450782 238 ntBASIC2.05□□□□□ -2.08
USP11P51784 Y_RNA.648-201ENST00000459455 110 ntBASIC2.05□□□□□ -2.08
USP11P51784 AC023790.1-201ENST00000482174 347 ntBASIC2.05□□□□□ -2.08
USP11P51784 MIR4264-201ENST00000583520 66 ntBASIC2.05□□□□□ -2.08
USP11P51784 AC145423.2-201ENST00000610631 239 ntBASIC2.05□□□□□ -2.08
USP11P51784 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USP11P51784 SNORD36A-201ENST00000362874 73 ntBASIC2.04□□□□□ -2.08
USP11P51784 Y_RNA.508-201ENST00000384502 114 ntBASIC2.04□□□□□ -2.08
USP11P51784 MIR1185-1-201ENST00000408598 86 ntBASIC2.04□□□□□ -2.08
USP11P51784 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.04□□□□□ -2.08
USP11P51784 MIR4713-201ENST00000582691 75 ntBASIC2.04□□□□□ -2.08
USP11P51784 GHRLOS.1-201ENST00000610995 70 ntBASIC2.04□□□□□ -2.08
USP11P51784 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.03□□□□□ -2.08
USP11P51784 Y_RNA.565-201ENST00000384719 101 ntBASIC2.03□□□□□ -2.08
USP11P51784 MIR516A2-201ENST00000384888 90 ntBASIC2.03□□□□□ -2.08
USP11P51784 MIR516A1-201ENST00000385033 90 ntBASIC2.03□□□□□ -2.08
USP11P51784 MT-TN-201ENST00000387400 73 ntBASIC2.03□□□□□ -2.08
USP11P51784 AL357312.1-201ENST00000603879 298 ntBASIC2.03□□□□□ -2.08
USP11P51784 RNU1-17P-201ENST00000363022 152 ntBASIC2.02□□□□□ -2.09
USP11P51784 RNU6-654P-201ENST00000364373 107 ntBASIC2.02□□□□□ -2.09
USP11P51784 RNU7-62P-201ENST00000458856 62 ntBASIC2.02□□□□□ -2.09
USP11P51784 RNU7-106P-201ENST00000459514 67 ntBASIC2.02□□□□□ -2.09
USP11P51784 RNU6-947P-201ENST00000516264 106 ntBASIC2.02□□□□□ -2.09
USP11P51784 MIR4419B-201ENST00000577260 68 ntBASIC2.02□□□□□ -2.09
USP11P51784 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.02□□□□□ -2.09
USP11P51784 Y_RNA.788-201ENST00000622394 112 ntBASIC2.02□□□□□ -2.09
USP11P51784 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USP11P51784 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.01□□□□□ -2.09
USP11P51784 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
USP11P51784 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
USP11P51784 RNA5SP292-201ENST00000390974 118 ntBASIC2.01□□□□□ -2.09
USP11P51784 RPL30P7-201ENST00000479312 323 ntBASIC2.01□□□□□ -2.09
USP11P51784 Y_RNA.676-201ENST00000516393 96 ntBASIC2.01□□□□□ -2.09
USP11P51784 MIR2115-201ENST00000516657 100 ntBASIC2.01□□□□□ -2.09
USP11P51784 MIR4255-201ENST00000579351 72 ntBASIC2.01□□□□□ -2.09
USP11P51784 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
USP11P51784 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
USP11P51784 Y_RNA.588-201ENST00000391254 102 ntBASIC2□□□□□ -2.09
USP11P51784 RNA5SP95-201ENST00000410319 137 ntBASIC2□□□□□ -2.09
USP11P51784 AL133373.1-201ENST00000497098 94 ntBASIC2□□□□□ -2.09
USP11P51784 RNU6-75P-201ENST00000515944 104 ntBASIC2□□□□□ -2.09
USP11P51784 RNU6-531P-201ENST00000516694 104 ntBASIC2□□□□□ -2.09
USP11P51784 SNORA25.16-201ENST00000516741 121 ntBASIC2□□□□□ -2.09
USP11P51784 MIR4491-201ENST00000581087 68 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms