Protein–RNA interactions for Protein: P50479

PDLIM4, PDZ and LIM domain protein 4, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4P50479 MIR4452-201ENST00000583004 71 ntBASIC1.05□□□□□ -2.24
PDLIM4P50479 Y_RNA.818-201ENST00000618813 71 ntBASIC1.05□□□□□ -2.24
PDLIM4P50479 Y_RNA.10-201ENST00000362371 110 ntBASIC1.04□□□□□ -2.24
PDLIM4P50479 Y_RNA.98-201ENST00000363109 102 ntBASIC1.04□□□□□ -2.24
PDLIM4P50479 Y_RNA.155-201ENST00000363632 101 ntBASIC1.04□□□□□ -2.24
PDLIM4P50479 SNORA51.5-201ENST00000384126 131 ntBASIC1.04□□□□□ -2.24
PDLIM4P50479 MIR577-201ENST00000385196 96 ntBASIC1.04□□□□□ -2.24
PDLIM4P50479 MIR618-201ENST00000385287 98 ntBASIC1.04□□□□□ -2.24
PDLIM4P50479 MRPL35P3-201ENST00000421557 364 ntBASIC1.04□□□□□ -2.24
PDLIM4P50479 uc_338.6-201ENST00000613544 171 ntBASIC1.04□□□□□ -2.24
PDLIM4P50479 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
PDLIM4P50479 RNU6-832P-201ENST00000363319 107 ntBASIC1.03□□□□□ -2.24
PDLIM4P50479 RNU6-756P-201ENST00000383997 107 ntBASIC1.03□□□□□ -2.24
PDLIM4P50479 RNU6-1201P-201ENST00000384227 107 ntBASIC1.03□□□□□ -2.24
PDLIM4P50479 MIR605-201ENST00000385078 83 ntBASIC1.03□□□□□ -2.24
PDLIM4P50479 RNU6-1321P-201ENST00000390905 107 ntBASIC1.03□□□□□ -2.24
PDLIM4P50479 U8.15-201ENST00000390947 134 ntBASIC1.03□□□□□ -2.24
PDLIM4P50479 Y_RNA.601-201ENST00000410500 113 ntBASIC1.03□□□□□ -2.24
PDLIM4P50479 RNU7-48P-201ENST00000458875 63 ntBASIC1.03□□□□□ -2.24
PDLIM4P50479 snoU13.18-201ENST00000459483 104 ntBASIC1.03□□□□□ -2.24
PDLIM4P50479 RNU6-1006P-201ENST00000516998 103 ntBASIC1.03□□□□□ -2.24
PDLIM4P50479 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
PDLIM4P50479 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.03□□□□□ -2.24
PDLIM4P50479 RNU4-36P-201ENST00000364294 144 ntBASIC1.02□□□□□ -2.25
PDLIM4P50479 RNU6-32P-201ENST00000383948 107 ntBASIC1.02□□□□□ -2.25
PDLIM4P50479 RNU6-13P-201ENST00000384248 107 ntBASIC1.02□□□□□ -2.25
PDLIM4P50479 RNU6-12P-201ENST00000384604 107 ntBASIC1.02□□□□□ -2.25
PDLIM4P50479 Y_RNA.544-201ENST00000384650 113 ntBASIC1.02□□□□□ -2.25
PDLIM4P50479 RNU6-41P-201ENST00000384741 107 ntBASIC1.02□□□□□ -2.25
PDLIM4P50479 MIR19B1-201ENST00000384829 87 ntBASIC1.02□□□□□ -2.25
PDLIM4P50479 MIR222-201ENST00000384992 110 ntBASIC1.02□□□□□ -2.25
PDLIM4P50479 RNU6-1307P-201ENST00000391012 103 ntBASIC1.02□□□□□ -2.25
PDLIM4P50479 RNA5SP95-201ENST00000410319 137 ntBASIC1.02□□□□□ -2.25
PDLIM4P50479 SNORA7.5-201ENST00000410672 110 ntBASIC1.02□□□□□ -2.25
PDLIM4P50479 UBL5P1-201ENST00000507979 193 ntBASIC1.02□□□□□ -2.25
PDLIM4P50479 DEFB131E-201ENST00000532329 154 ntBASIC1.02□□□□□ -2.25
PDLIM4P50479 AC141557.1-201ENST00000540982 400 ntBASIC1.02□□□□□ -2.25
PDLIM4P50479 MIR4439-201ENST00000583746 80 ntBASIC1.02□□□□□ -2.25
PDLIM4P50479 AL442128.1-201ENST00000615151 90 ntBASIC1.02□□□□□ -2.25
PDLIM4P50479 RNA5SP327-201ENST00000362494 101 ntBASIC1.01□□□□□ -2.25
PDLIM4P50479 Y_RNA.448-201ENST00000384185 108 ntBASIC1.01□□□□□ -2.25
PDLIM4P50479 Y_RNA.466-201ENST00000384294 113 ntBASIC1.01□□□□□ -2.25
PDLIM4P50479 SNORA25-201ENST00000384384 134 ntBASIC1.01□□□□□ -2.25
PDLIM4P50479 SNORA2B-201ENST00000384583 137 ntBASIC1.01□□□□□ -2.25
PDLIM4P50479 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
PDLIM4P50479 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.01□□□□□ -2.25
PDLIM4P50479 AC133485.1-201ENST00000567176 124 ntBASIC1.01□□□□□ -2.25
PDLIM4P50479 MIR4295-201ENST00000585286 85 ntBASIC1.01□□□□□ -2.25
PDLIM4P50479 AL078603.1-201ENST00000603824 313 ntBASIC1.01□□□□□ -2.25
PDLIM4P50479 MIR376B-201ENST00000614515 100 ntBASIC1.01□□□□□ -2.25
PDLIM4P50479 AC027335.2-201ENST00000624030 375 ntBASIC1.01□□□□□ -2.25
PDLIM4P50479 AP001362.1-201ENST00000625165 124 ntBASIC1.01□□□□□ -2.25
PDLIM4P50479 HSBP1P2-201ENST00000299671 229 ntBASIC1□□□□□ -2.25
PDLIM4P50479 SNORD38.1-201ENST00000363863 68 ntBASIC1□□□□□ -2.25
PDLIM4P50479 Y_RNA.495-201ENST00000384435 112 ntBASIC1□□□□□ -2.25
PDLIM4P50479 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1□□□□□ -2.25
PDLIM4P50479 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1□□□□□ -2.25
PDLIM4P50479 AC002429.1-201ENST00000437672 148 ntBASIC1□□□□□ -2.25
PDLIM4P50479 AC087343.1-201ENST00000477341 475 ntBASIC1□□□□□ -2.25
PDLIM4P50479 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1□□□□□ -2.25
PDLIM4P50479 RNU6-1194P-201ENST00000516208 104 ntBASIC1□□□□□ -2.25
PDLIM4P50479 AL512310.12-203ENST00000640543 90 ntBASIC1□□□□□ -2.25
PDLIM4P50479 MIR450A1-201ENST00000362262 91 ntBASIC0.99□□□□□ -2.25
PDLIM4P50479 Y_RNA.93-201ENST00000363066 109 ntBASIC0.99□□□□□ -2.25
PDLIM4P50479 RNU6-865P-201ENST00000364772 107 ntBASIC0.99□□□□□ -2.25
PDLIM4P50479 RNU1-36P-201ENST00000365130 165 ntBASIC0.99□□□□□ -2.25
PDLIM4P50479 MIR34C-201ENST00000384831 77 ntBASIC0.99□□□□□ -2.25
PDLIM4P50479 MIR590-201ENST00000385008 97 ntBASIC0.99□□□□□ -2.25
PDLIM4P50479 Y_RNA.588-201ENST00000391254 102 ntBASIC0.99□□□□□ -2.25
PDLIM4P50479 SCARNA23-201ENST00000516060 130 ntBASIC0.99□□□□□ -2.25
PDLIM4P50479 RNA5SP220-201ENST00000516298 104 ntBASIC0.99□□□□□ -2.25
PDLIM4P50479 AC138749.4-201ENST00000563970 127 ntBASIC0.99□□□□□ -2.25
PDLIM4P50479 AP001318.4-201ENST00000616637 121 ntBASIC0.99□□□□□ -2.25
PDLIM4P50479 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.99□□□□□ -2.25
PDLIM4P50479 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
PDLIM4P50479 RNU6-934P-201ENST00000365154 107 ntBASIC0.98□□□□□ -2.25
PDLIM4P50479 SNORD114-22-201ENST00000365423 72 ntBASIC0.98□□□□□ -2.25
PDLIM4P50479 RNU6-42P-201ENST00000384165 107 ntBASIC0.98□□□□□ -2.25
PDLIM4P50479 MIR489-201ENST00000384923 84 ntBASIC0.98□□□□□ -2.25
PDLIM4P50479 MIR1285-1-201ENST00000408593 84 ntBASIC0.98□□□□□ -2.25
PDLIM4P50479 RPS26P5-201ENST00000418544 335 ntBASIC0.98□□□□□ -2.25
PDLIM4P50479 RNU7-185P-201ENST00000459215 60 ntBASIC0.98□□□□□ -2.25
PDLIM4P50479 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
PDLIM4P50479 RNU6-168P-201ENST00000516189 101 ntBASIC0.98□□□□□ -2.25
PDLIM4P50479 AC023827.1-201ENST00000569247 97 ntBASIC0.98□□□□□ -2.25
PDLIM4P50479 MIR4491-201ENST00000581087 68 ntBASIC0.98□□□□□ -2.25
PDLIM4P50479 AC096720.1-201ENST00000604441 183 ntBASIC0.98□□□□□ -2.25
PDLIM4P50479 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.98□□□□□ -2.25
PDLIM4P50479 AC105081.1-201ENST00000617727 106 ntBASIC0.98□□□□□ -2.25
PDLIM4P50479 MIR6734-201ENST00000621166 68 ntBASIC0.98□□□□□ -2.25
PDLIM4P50479 RNU6-369P-201ENST00000362515 102 ntBASIC0.97□□□□□ -2.25
PDLIM4P50479 RNU1-124P-201ENST00000363861 145 ntBASIC0.97□□□□□ -2.25
PDLIM4P50479 SNORD45B-201ENST00000364617 72 ntBASIC0.97□□□□□ -2.25
PDLIM4P50479 Y_RNA.348-201ENST00000365403 103 ntBASIC0.97□□□□□ -2.25
PDLIM4P50479 SNORD38.2-201ENST00000384470 69 ntBASIC0.97□□□□□ -2.25
PDLIM4P50479 RPS29P28-201ENST00000446439 141 ntBASIC0.97□□□□□ -2.25
PDLIM4P50479 snoU13.21-201ENST00000459368 105 ntBASIC0.97□□□□□ -2.25
PDLIM4P50479 RNU6-765P-201ENST00000516916 99 ntBASIC0.97□□□□□ -2.25
PDLIM4P50479 MIR2052-201ENST00000636055 55 ntBASIC0.97□□□□□ -2.25
PDLIM4P50479 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 237.5 ms