Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 SNORA2B-201ENST00000384583 137 ntBASIC1.5□□□□□ -2.17
CLK3P49761 MIR181B2-201ENST00000385004 89 ntBASIC1.5□□□□□ -2.17
CLK3P49761 MIR563-201ENST00000385080 79 ntBASIC1.5□□□□□ -2.17
CLK3P49761 MIR1302-7-201ENST00000408841 72 ntBASIC1.5□□□□□ -2.17
CLK3P49761 RNU6-613P-201ENST00000410412 108 ntBASIC1.5□□□□□ -2.17
CLK3P49761 Y_RNA.607-201ENST00000410597 98 ntBASIC1.5□□□□□ -2.17
CLK3P49761 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.5□□□□□ -2.17
CLK3P49761 RNU6-902P-201ENST00000517212 91 ntBASIC1.5□□□□□ -2.17
CLK3P49761 MIR4255-201ENST00000579351 72 ntBASIC1.5□□□□□ -2.17
CLK3P49761 AC104984.5-201ENST00000586878 94 ntBASIC1.5□□□□□ -2.17
CLK3P49761 AP000942.3-201ENST00000603702 160 ntBASIC1.5□□□□□ -2.17
CLK3P49761 GHRLOS.1-201ENST00000610995 70 ntBASIC1.5□□□□□ -2.17
CLK3P49761 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.5□□□□□ -2.17
CLK3P49761 MIR588-201ENST00000384900 83 ntBASIC1.49□□□□□ -2.17
CLK3P49761 SNORD53B-201ENST00000577887 78 ntBASIC1.49□□□□□ -2.17
CLK3P49761 MIR4264-201ENST00000583520 66 ntBASIC1.49□□□□□ -2.17
CLK3P49761 AP000753.3-201ENST00000604083 169 ntBASIC1.49□□□□□ -2.17
CLK3P49761 Y_RNA.244-201ENST00000364484 109 ntBASIC1.48□□□□□ -2.17
CLK3P49761 RNA5SP190-201ENST00000365222 118 ntBASIC1.48□□□□□ -2.17
CLK3P49761 MT-TN-201ENST00000387400 73 ntBASIC1.48□□□□□ -2.17
CLK3P49761 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.48□□□□□ -2.17
CLK3P49761 AL591806.2-201ENST00000433122 173 ntBASIC1.48□□□□□ -2.17
CLK3P49761 AC023790.1-201ENST00000482174 347 ntBASIC1.48□□□□□ -2.17
CLK3P49761 AC020891.4-201ENST00000605745 93 ntBASIC1.48□□□□□ -2.17
CLK3P49761 Y_RNA.168-201ENST00000363740 102 ntBASIC1.47□□□□□ -2.17
CLK3P49761 RNU6-24P-201ENST00000384440 107 ntBASIC1.47□□□□□ -2.17
CLK3P49761 RPS27P16-201ENST00000425758 201 ntBASIC1.47□□□□□ -2.17
CLK3P49761 RPL30P7-201ENST00000479312 323 ntBASIC1.47□□□□□ -2.17
CLK3P49761 AC108210.2-201ENST00000503681 201 ntBASIC1.47□□□□□ -2.17
CLK3P49761 RNU6-857P-201ENST00000515893 110 ntBASIC1.47□□□□□ -2.17
CLK3P49761 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.47□□□□□ -2.17
CLK3P49761 SNORA4-201ENST00000584302 138 ntBASIC1.47□□□□□ -2.17
CLK3P49761 BX248123.2-201ENST00000606318 124 ntBASIC1.47□□□□□ -2.17
CLK3P49761 RNA5SP133-201ENST00000363368 119 ntBASIC1.46□□□□□ -2.18
CLK3P49761 MIR517C-201ENST00000385103 95 ntBASIC1.46□□□□□ -2.18
CLK3P49761 MIR320A-201ENST00000385302 82 ntBASIC1.46□□□□□ -2.18
CLK3P49761 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.46□□□□□ -2.18
CLK3P49761 SNORA67.5-201ENST00000391036 107 ntBASIC1.46□□□□□ -2.18
CLK3P49761 SNRPGP12-201ENST00000449481 213 ntBASIC1.46□□□□□ -2.18
CLK3P49761 snoU13.23-201ENST00000458863 104 ntBASIC1.46□□□□□ -2.18
CLK3P49761 MIR2115-201ENST00000516657 100 ntBASIC1.46□□□□□ -2.18
CLK3P49761 RNU11-2P-201ENST00000516898 142 ntBASIC1.46□□□□□ -2.18
CLK3P49761 AC138749.4-201ENST00000563970 127 ntBASIC1.46□□□□□ -2.18
CLK3P49761 AC090897.1-201ENST00000580909 226 ntBASIC1.46□□□□□ -2.18
CLK3P49761 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.46□□□□□ -2.18
CLK3P49761 MIR6715A-201ENST00000615929 79 ntBASIC1.46□□□□□ -2.18
CLK3P49761 MIR8066-201ENST00000617280 78 ntBASIC1.46□□□□□ -2.18
CLK3P49761 MIR6740-201ENST00000618268 113 ntBASIC1.46□□□□□ -2.18
CLK3P49761 MIR30D-201ENST00000362283 70 ntBASIC1.45□□□□□ -2.18
CLK3P49761 SNORA25.3-201ENST00000363205 127 ntBASIC1.45□□□□□ -2.18
CLK3P49761 SNORD115-27-201ENST00000364430 82 ntBASIC1.45□□□□□ -2.18
CLK3P49761 RNU6-652P-201ENST00000365488 107 ntBASIC1.45□□□□□ -2.18
CLK3P49761 MIR519C-201ENST00000385053 87 ntBASIC1.45□□□□□ -2.18
CLK3P49761 RNU6-1165P-201ENST00000410119 107 ntBASIC1.45□□□□□ -2.18
CLK3P49761 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
CLK3P49761 AL133373.1-201ENST00000497098 94 ntBASIC1.45□□□□□ -2.18
CLK3P49761 AP003716.2-201ENST00000528260 108 ntBASIC1.45□□□□□ -2.18
CLK3P49761 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.45□□□□□ -2.18
CLK3P49761 AL512310.8-201ENST00000550183 120 ntBASIC1.45□□□□□ -2.18
CLK3P49761 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CLK3P49761 AC008163.1-202ENST00000636004 2889 ntBASIC1.45□□□□□ -2.18
CLK3P49761 MIR377-201ENST00000362145 69 ntBASIC1.44□□□□□ -2.18
CLK3P49761 RNU6-571P-201ENST00000384128 107 ntBASIC1.44□□□□□ -2.18
CLK3P49761 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CLK3P49761 SNORA67.6-201ENST00000391093 99 ntBASIC1.44□□□□□ -2.18
CLK3P49761 RNU6-519P-201ENST00000410590 108 ntBASIC1.44□□□□□ -2.18
CLK3P49761 snoU13.25-201ENST00000458945 104 ntBASIC1.44□□□□□ -2.18
CLK3P49761 AC093729.1-201ENST00000513074 128 ntBASIC1.44□□□□□ -2.18
CLK3P49761 AC019288.1-201ENST00000557918 224 ntBASIC1.44□□□□□ -2.18
CLK3P49761 MIR3664-201ENST00000579074 99 ntBASIC1.44□□□□□ -2.18
CLK3P49761 MIR4500-201ENST00000579472 76 ntBASIC1.44□□□□□ -2.18
CLK3P49761 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CLK3P49761 Y_RNA.316-201ENST00000365118 111 ntBASIC1.43□□□□□ -2.18
CLK3P49761 RNU6-524P-201ENST00000384270 107 ntBASIC1.43□□□□□ -2.18
CLK3P49761 MT-TF-201ENST00000387314 71 ntBASIC1.43□□□□□ -2.18
CLK3P49761 RNU7-62P-201ENST00000458856 62 ntBASIC1.43□□□□□ -2.18
CLK3P49761 RNU6-850P-201ENST00000516934 103 ntBASIC1.43□□□□□ -2.18
CLK3P49761 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.43□□□□□ -2.18
CLK3P49761 AC015712.3-201ENST00000559380 164 ntBASIC1.43□□□□□ -2.18
CLK3P49761 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.43□□□□□ -2.18
CLK3P49761 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
CLK3P49761 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.43□□□□□ -2.18
CLK3P49761 U6.109-201ENST00000636749 87 ntBASIC1.43□□□□□ -2.18
CLK3P49761 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CLK3P49761 Y_RNA.57-201ENST00000362806 113 ntBASIC1.42□□□□□ -2.18
CLK3P49761 Y_RNA.119-201ENST00000363301 96 ntBASIC1.42□□□□□ -2.18
CLK3P49761 SNORD115-37-201ENST00000363768 82 ntBASIC1.42□□□□□ -2.18
CLK3P49761 Y_RNA.221-201ENST00000364248 96 ntBASIC1.42□□□□□ -2.18
CLK3P49761 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CLK3P49761 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CLK3P49761 RNU6-205P-201ENST00000390858 107 ntBASIC1.42□□□□□ -2.18
CLK3P49761 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.42□□□□□ -2.18
CLK3P49761 AC087499.7-201ENST00000441958 109 ntBASIC1.42□□□□□ -2.18
CLK3P49761 SNORD13-201ENST00000459299 104 ntBASIC1.42□□□□□ -2.18
CLK3P49761 RNU6-947P-201ENST00000516264 106 ntBASIC1.42□□□□□ -2.18
CLK3P49761 AL512598.1-201ENST00000610158 273 ntBASIC1.42□□□□□ -2.18
CLK3P49761 AL353997.5-201ENST00000618886 171 ntBASIC1.42□□□□□ -2.18
CLK3P49761 MIR6516-201ENST00000630554 81 ntBASIC1.42□□□□□ -2.18
CLK3P49761 RNA5SP264-201ENST00000363115 107 ntBASIC1.41□□□□□ -2.18
CLK3P49761 RNU6-1296P-201ENST00000383879 107 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms