Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 AC026421.1-201ENST00000519101 163 ntBASIC1.67□□□□□ -2.14
SLC6A11P48066 AP003716.2-201ENST00000528260 108 ntBASIC1.67□□□□□ -2.14
SLC6A11P48066 7SK.8-201ENST00000612110 250 ntBASIC1.67□□□□□ -2.14
SLC6A11P48066 uc_338.6-201ENST00000613544 171 ntBASIC1.67□□□□□ -2.14
SLC6A11P48066 7SK.11-201ENST00000615477 250 ntBASIC1.67□□□□□ -2.14
SLC6A11P48066 7SK.13-201ENST00000622040 250 ntBASIC1.67□□□□□ -2.14
SLC6A11P48066 U6.109-201ENST00000636749 87 ntBASIC1.67□□□□□ -2.14
SLC6A11P48066 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SLC6A11P48066 SNORD48-201ENST00000364953 64 ntBASIC1.66□□□□□ -2.14
SLC6A11P48066 Y_RNA.330-201ENST00000365230 109 ntBASIC1.66□□□□□ -2.14
SLC6A11P48066 RNU6-813P-201ENST00000384691 107 ntBASIC1.66□□□□□ -2.14
SLC6A11P48066 RNU6-972P-201ENST00000391208 107 ntBASIC1.66□□□□□ -2.14
SLC6A11P48066 MIR934-201ENST00000401241 83 ntBASIC1.66□□□□□ -2.14
SLC6A11P48066 RNU6-613P-201ENST00000410412 108 ntBASIC1.66□□□□□ -2.14
SLC6A11P48066 RNU7-95P-201ENST00000459222 64 ntBASIC1.66□□□□□ -2.14
SLC6A11P48066 MIR4439-201ENST00000583746 80 ntBASIC1.66□□□□□ -2.14
SLC6A11P48066 RNU6-90P-201ENST00000606352 106 ntBASIC1.66□□□□□ -2.14
SLC6A11P48066 SEPT14P17-201ENST00000617978 177 ntBASIC1.66□□□□□ -2.14
SLC6A11P48066 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SLC6A11P48066 MIR30D-201ENST00000362283 70 ntBASIC1.65□□□□□ -2.15
SLC6A11P48066 Y_RNA.168-201ENST00000363740 102 ntBASIC1.65□□□□□ -2.15
SLC6A11P48066 RNU6-1163P-201ENST00000364516 107 ntBASIC1.65□□□□□ -2.15
SLC6A11P48066 SNORA2B-201ENST00000384583 137 ntBASIC1.65□□□□□ -2.15
SLC6A11P48066 SNORA26.2-201ENST00000390922 122 ntBASIC1.65□□□□□ -2.15
SLC6A11P48066 RPS27P16-201ENST00000425758 201 ntBASIC1.65□□□□□ -2.15
SLC6A11P48066 AC048334.1-201ENST00000477975 159 ntBASIC1.65□□□□□ -2.15
SLC6A11P48066 AC103810.7-201ENST00000607821 91 ntBASIC1.65□□□□□ -2.15
SLC6A11P48066 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.65□□□□□ -2.15
SLC6A11P48066 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SLC6A11P48066 MIR377-201ENST00000362145 69 ntBASIC1.64□□□□□ -2.15
SLC6A11P48066 RNA5SP133-201ENST00000363368 119 ntBASIC1.64□□□□□ -2.15
SLC6A11P48066 Y_RNA.567-201ENST00000384736 106 ntBASIC1.64□□□□□ -2.15
SLC6A11P48066 U8.15-201ENST00000390947 134 ntBASIC1.64□□□□□ -2.15
SLC6A11P48066 AC024614.2-201ENST00000577584 372 ntBASIC1.64□□□□□ -2.15
SLC6A11P48066 AC090897.1-201ENST00000580909 226 ntBASIC1.64□□□□□ -2.15
SLC6A11P48066 MIR4422-201ENST00000581938 83 ntBASIC1.64□□□□□ -2.15
SLC6A11P48066 AC012676.2-201ENST00000619258 186 ntBASIC1.64□□□□□ -2.15
SLC6A11P48066 RNY1P2-201ENST00000364820 117 ntBASIC1.63□□□□□ -2.15
SLC6A11P48066 MT-TF-201ENST00000387314 71 ntBASIC1.63□□□□□ -2.15
SLC6A11P48066 snoU13.18-201ENST00000459483 104 ntBASIC1.63□□□□□ -2.15
SLC6A11P48066 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.63□□□□□ -2.15
SLC6A11P48066 SNORA31.2-201ENST00000516019 134 ntBASIC1.63□□□□□ -2.15
SLC6A11P48066 AC138749.4-201ENST00000563970 127 ntBASIC1.63□□□□□ -2.15
SLC6A11P48066 SNORD53B-201ENST00000577887 78 ntBASIC1.63□□□□□ -2.15
SLC6A11P48066 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.63□□□□□ -2.15
SLC6A11P48066 Y_RNA.190-201ENST00000363964 101 ntBASIC1.62□□□□□ -2.15
SLC6A11P48066 RNU1-78P-201ENST00000391248 165 ntBASIC1.62□□□□□ -2.15
SLC6A11P48066 RNY4P29-201ENST00000410801 97 ntBASIC1.62□□□□□ -2.15
SLC6A11P48066 MIR3122-201ENST00000577243 73 ntBASIC1.62□□□□□ -2.15
SLC6A11P48066 MIR4500-201ENST00000579472 76 ntBASIC1.62□□□□□ -2.15
SLC6A11P48066 AL512598.1-201ENST00000610158 273 ntBASIC1.62□□□□□ -2.15
SLC6A11P48066 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SLC6A11P48066 MIR494-201ENST00000349529 81 ntBASIC1.61□□□□□ -2.15
SLC6A11P48066 RNU6-1244P-201ENST00000363614 108 ntBASIC1.61□□□□□ -2.15
SLC6A11P48066 Y_RNA.224-201ENST00000364308 111 ntBASIC1.61□□□□□ -2.15
SLC6A11P48066 MIR1323-201ENST00000408090 73 ntBASIC1.61□□□□□ -2.15
SLC6A11P48066 RNU1-98P-201ENST00000458992 160 ntBASIC1.61□□□□□ -2.15
SLC6A11P48066 MIR4285-201ENST00000581001 85 ntBASIC1.61□□□□□ -2.15
SLC6A11P48066 SNORD116-10-201ENST00000363791 102 ntBASIC1.6□□□□□ -2.15
SLC6A11P48066 SNORA72.6-201ENST00000384520 129 ntBASIC1.6□□□□□ -2.15
SLC6A11P48066 SNORD93-201ENST00000408813 74 ntBASIC1.6□□□□□ -2.15
SLC6A11P48066 AC062037.1-201ENST00000605302 128 ntBASIC1.6□□□□□ -2.15
SLC6A11P48066 BX248123.2-201ENST00000606318 124 ntBASIC1.6□□□□□ -2.15
SLC6A11P48066 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.6□□□□□ -2.15
SLC6A11P48066 Y_RNA.17-201ENST00000362433 111 ntBASIC1.59□□□□□ -2.15
SLC6A11P48066 Y_RNA.119-201ENST00000363301 96 ntBASIC1.59□□□□□ -2.15
SLC6A11P48066 MIR450A2-201ENST00000385022 100 ntBASIC1.59□□□□□ -2.15
SLC6A11P48066 SNORA67.6-201ENST00000391093 99 ntBASIC1.59□□□□□ -2.15
SLC6A11P48066 SNORA75.2-201ENST00000391138 150 ntBASIC1.59□□□□□ -2.15
SLC6A11P48066 SNORA75.3-201ENST00000391231 150 ntBASIC1.59□□□□□ -2.15
SLC6A11P48066 snoU13.21-201ENST00000459368 105 ntBASIC1.59□□□□□ -2.15
SLC6A11P48066 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
SLC6A11P48066 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SLC6A11P48066 RNU6-403P-201ENST00000363163 104 ntBASIC1.58□□□□□ -2.16
SLC6A11P48066 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
SLC6A11P48066 SNORD58A-201ENST00000383875 65 ntBASIC1.58□□□□□ -2.16
SLC6A11P48066 Y_RNA.388-201ENST00000383919 113 ntBASIC1.58□□□□□ -2.16
SLC6A11P48066 MIR489-201ENST00000384923 84 ntBASIC1.58□□□□□ -2.16
SLC6A11P48066 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SLC6A11P48066 Y_RNA.593-201ENST00000410292 98 ntBASIC1.58□□□□□ -2.16
SLC6A11P48066 RNU6-1054P-201ENST00000411293 104 ntBASIC1.58□□□□□ -2.16
SLC6A11P48066 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.58□□□□□ -2.16
SLC6A11P48066 AC023934.1-201ENST00000574529 2389 ntBASIC1.58□□□□□ -2.16
SLC6A11P48066 HSBP1P2-201ENST00000299671 229 ntBASIC1.57□□□□□ -2.16
SLC6A11P48066 Y_RNA.173-201ENST00000363776 113 ntBASIC1.57□□□□□ -2.16
SLC6A11P48066 RNU6-580P-201ENST00000365159 107 ntBASIC1.57□□□□□ -2.16
SLC6A11P48066 SNORD83.1-201ENST00000411362 77 ntBASIC1.57□□□□□ -2.16
SLC6A11P48066 BX276092.1-201ENST00000427368 251 ntBASIC1.57□□□□□ -2.16
SLC6A11P48066 MIR18B-201ENST00000454574 71 ntBASIC1.57□□□□□ -2.16
SLC6A11P48066 RN7SKP12-201ENST00000516275 143 ntBASIC1.57□□□□□ -2.16
SLC6A11P48066 RNU6-902P-201ENST00000517212 91 ntBASIC1.57□□□□□ -2.16
SLC6A11P48066 AC023827.1-201ENST00000569247 97 ntBASIC1.57□□□□□ -2.16
SLC6A11P48066 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.56□□□□□ -2.16
SLC6A11P48066 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.56□□□□□ -2.16
SLC6A11P48066 RNU6-1125P-201ENST00000363601 107 ntBASIC1.56□□□□□ -2.16
SLC6A11P48066 RNU6-53P-201ENST00000365367 106 ntBASIC1.56□□□□□ -2.16
SLC6A11P48066 RNU6-480P-201ENST00000384332 107 ntBASIC1.56□□□□□ -2.16
SLC6A11P48066 MIR181B2-201ENST00000385004 89 ntBASIC1.56□□□□□ -2.16
SLC6A11P48066 MIR517C-201ENST00000385103 95 ntBASIC1.56□□□□□ -2.16
SLC6A11P48066 MIR1257-201ENST00000408490 117 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 216.8 ms