Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 MIR19B1-201ENST00000384829 87 ntBASIC1.23□□□□□ -2.21
NPTX2P47972 MIR34C-201ENST00000384831 77 ntBASIC1.23□□□□□ -2.21
NPTX2P47972 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.23□□□□□ -2.21
NPTX2P47972 AC002429.1-201ENST00000437672 148 ntBASIC1.23□□□□□ -2.21
NPTX2P47972 RNU7-48P-201ENST00000458875 63 ntBASIC1.23□□□□□ -2.21
NPTX2P47972 AC141557.1-201ENST00000540982 400 ntBASIC1.23□□□□□ -2.21
NPTX2P47972 AC133485.1-201ENST00000567176 124 ntBASIC1.23□□□□□ -2.21
NPTX2P47972 MIR4781-201ENST00000585250 76 ntBASIC1.23□□□□□ -2.21
NPTX2P47972 MIR376B-201ENST00000614515 100 ntBASIC1.23□□□□□ -2.21
NPTX2P47972 Y_RNA.4-201ENST00000362333 112 ntBASIC1.22□□□□□ -2.21
NPTX2P47972 RNY3P2-201ENST00000362918 102 ntBASIC1.22□□□□□ -2.21
NPTX2P47972 RNU6-1099P-201ENST00000363533 107 ntBASIC1.22□□□□□ -2.21
NPTX2P47972 RNU6-865P-201ENST00000364772 107 ntBASIC1.22□□□□□ -2.21
NPTX2P47972 RNU6-934P-201ENST00000365154 107 ntBASIC1.22□□□□□ -2.21
NPTX2P47972 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.22□□□□□ -2.21
NPTX2P47972 AC015818.7-201ENST00000428754 109 ntBASIC1.22□□□□□ -2.21
NPTX2P47972 AC087499.7-201ENST00000441958 109 ntBASIC1.22□□□□□ -2.21
NPTX2P47972 UBL5P1-201ENST00000507979 193 ntBASIC1.22□□□□□ -2.21
NPTX2P47972 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.22□□□□□ -2.21
NPTX2P47972 AL512310.12-203ENST00000640543 90 ntBASIC1.22□□□□□ -2.21
NPTX2P47972 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
NPTX2P47972 AC023934.1-201ENST00000574529 2389 ntBASIC1.22□□□□□ -2.21
NPTX2P47972 Y_RNA.78-201ENST00000362970 110 ntBASIC1.21□□□□□ -2.22
NPTX2P47972 RNU6-832P-201ENST00000363319 107 ntBASIC1.21□□□□□ -2.22
NPTX2P47972 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
NPTX2P47972 RNU7-185P-201ENST00000459215 60 ntBASIC1.21□□□□□ -2.22
NPTX2P47972 RNU6-904P-201ENST00000516206 101 ntBASIC1.21□□□□□ -2.22
NPTX2P47972 AC138749.4-201ENST00000563970 127 ntBASIC1.21□□□□□ -2.22
NPTX2P47972 MIR4771-2-201ENST00000577758 74 ntBASIC1.21□□□□□ -2.22
NPTX2P47972 MIR3613-201ENST00000579844 87 ntBASIC1.21□□□□□ -2.22
NPTX2P47972 MIR4771-1-201ENST00000582617 74 ntBASIC1.21□□□□□ -2.22
NPTX2P47972 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.21□□□□□ -2.22
NPTX2P47972 Y_RNA.98-201ENST00000363109 102 ntBASIC1.2□□□□□ -2.22
NPTX2P47972 RNY1P2-201ENST00000364820 117 ntBASIC1.2□□□□□ -2.22
NPTX2P47972 RNU1-36P-201ENST00000365130 165 ntBASIC1.2□□□□□ -2.22
NPTX2P47972 Y_RNA.377-201ENST00000365644 108 ntBASIC1.2□□□□□ -2.22
NPTX2P47972 RNU6-1113P-201ENST00000384348 107 ntBASIC1.2□□□□□ -2.22
NPTX2P47972 MIR590-201ENST00000385008 97 ntBASIC1.2□□□□□ -2.22
NPTX2P47972 SNORD93-201ENST00000408813 74 ntBASIC1.2□□□□□ -2.22
NPTX2P47972 RNU6-994P-201ENST00000410507 111 ntBASIC1.2□□□□□ -2.22
NPTX2P47972 OR2A41P-201ENST00000473586 105 ntBASIC1.2□□□□□ -2.22
NPTX2P47972 RNU6-1006P-201ENST00000516998 103 ntBASIC1.2□□□□□ -2.22
NPTX2P47972 MIR4295-201ENST00000585286 85 ntBASIC1.2□□□□□ -2.22
NPTX2P47972 AL442128.1-201ENST00000615151 90 ntBASIC1.2□□□□□ -2.22
NPTX2P47972 AP001362.1-201ENST00000625165 124 ntBASIC1.2□□□□□ -2.22
NPTX2P47972 U6.109-201ENST00000636749 87 ntBASIC1.2□□□□□ -2.22
NPTX2P47972 RNA5SP133-201ENST00000363368 119 ntBASIC1.19□□□□□ -2.22
NPTX2P47972 Y_RNA.247-201ENST00000364500 92 ntBASIC1.19□□□□□ -2.22
NPTX2P47972 Y_RNA.588-201ENST00000391254 102 ntBASIC1.19□□□□□ -2.22
NPTX2P47972 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
NPTX2P47972 MIR1257-201ENST00000408490 117 ntBASIC1.19□□□□□ -2.22
NPTX2P47972 RPS26P5-201ENST00000418544 335 ntBASIC1.19□□□□□ -2.22
NPTX2P47972 RNU6-537P-201ENST00000517277 103 ntBASIC1.19□□□□□ -2.22
NPTX2P47972 DEFB131E-201ENST00000532329 154 ntBASIC1.19□□□□□ -2.22
NPTX2P47972 MIR4491-201ENST00000581087 68 ntBASIC1.19□□□□□ -2.22
NPTX2P47972 AC020891.4-201ENST00000605745 93 ntBASIC1.19□□□□□ -2.22
NPTX2P47972 RNU6-369P-201ENST00000362515 102 ntBASIC1.18□□□□□ -2.22
NPTX2P47972 Y_RNA.164-201ENST00000363709 102 ntBASIC1.18□□□□□ -2.22
NPTX2P47972 RNU4-36P-201ENST00000364294 144 ntBASIC1.18□□□□□ -2.22
NPTX2P47972 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.18□□□□□ -2.22
NPTX2P47972 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
NPTX2P47972 MIR337-201ENST00000362281 93 ntBASIC1.17□□□□□ -2.22
NPTX2P47972 RNU6-32P-201ENST00000383948 107 ntBASIC1.17□□□□□ -2.22
NPTX2P47972 RNU6-13P-201ENST00000384248 107 ntBASIC1.17□□□□□ -2.22
NPTX2P47972 RNU6-12P-201ENST00000384604 107 ntBASIC1.17□□□□□ -2.22
NPTX2P47972 RNU6-41P-201ENST00000384741 107 ntBASIC1.17□□□□□ -2.22
NPTX2P47972 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
NPTX2P47972 RPS29P28-201ENST00000446439 141 ntBASIC1.17□□□□□ -2.22
NPTX2P47972 AC087343.1-201ENST00000477341 475 ntBASIC1.17□□□□□ -2.22
NPTX2P47972 SNORD114-21-201ENST00000606412 72 ntBASIC1.17□□□□□ -2.22
NPTX2P47972 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
NPTX2P47972 RNU6-403P-201ENST00000363163 104 ntBASIC1.16□□□□□ -2.22
NPTX2P47972 Y_RNA.495-201ENST00000384435 112 ntBASIC1.16□□□□□ -2.22
NPTX2P47972 MIR125B2-201ENST00000385128 89 ntBASIC1.16□□□□□ -2.22
NPTX2P47972 Y_RNA.601-201ENST00000410500 113 ntBASIC1.16□□□□□ -2.22
NPTX2P47972 RNU4-83P-201ENST00000410863 133 ntBASIC1.16□□□□□ -2.22
NPTX2P47972 RNU6-109P-201ENST00000516364 107 ntBASIC1.16□□□□□ -2.22
NPTX2P47972 RNU6-184P-201ENST00000516514 107 ntBASIC1.16□□□□□ -2.22
NPTX2P47972 SNORA25.16-201ENST00000516741 121 ntBASIC1.16□□□□□ -2.22
NPTX2P47972 MIR4676-201ENST00000583078 72 ntBASIC1.16□□□□□ -2.22
NPTX2P47972 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.16□□□□□ -2.22
NPTX2P47972 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
NPTX2P47972 Y_RNA.119-201ENST00000363301 96 ntBASIC1.15□□□□□ -2.23
NPTX2P47972 SNORD38.1-201ENST00000363863 68 ntBASIC1.15□□□□□ -2.23
NPTX2P47972 AC090897.1-201ENST00000580909 226 ntBASIC1.15□□□□□ -2.23
NPTX2P47972 Y_RNA.818-201ENST00000618813 71 ntBASIC1.15□□□□□ -2.23
NPTX2P47972 Y_RNA.10-201ENST00000362371 110 ntBASIC1.14□□□□□ -2.23
NPTX2P47972 SNORA72.6-201ENST00000384520 129 ntBASIC1.14□□□□□ -2.23
NPTX2P47972 MIR200A-201ENST00000384875 90 ntBASIC1.14□□□□□ -2.23
NPTX2P47972 Y_RNA.659-201ENST00000515994 113 ntBASIC1.14□□□□□ -2.23
NPTX2P47972 SCARNA23-201ENST00000516060 130 ntBASIC1.14□□□□□ -2.23
NPTX2P47972 RNU6-168P-201ENST00000516189 101 ntBASIC1.14□□□□□ -2.23
NPTX2P47972 RNA5SP102-201ENST00000516865 106 ntBASIC1.14□□□□□ -2.23
NPTX2P47972 AC096720.1-201ENST00000604441 183 ntBASIC1.14□□□□□ -2.23
NPTX2P47972 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
NPTX2P47972 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
NPTX2P47972 MIR1-1-201ENST00000362147 71 ntBASIC1.13□□□□□ -2.23
NPTX2P47972 SNORD114-24-201ENST00000365029 72 ntBASIC1.13□□□□□ -2.23
NPTX2P47972 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
NPTX2P47972 Y_RNA.544-201ENST00000384650 113 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms