Protein–RNA interactions for Protein: P35713

SOX18, Transcription factor SOX-18, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18P35713 RNU6-1065P-201ENST00000384513 106 ntBASIC2.05□□□□□ -2.08
SOX18P35713 RNU6-243P-201ENST00000391140 107 ntBASIC2.05□□□□□ -2.08
SOX18P35713 HMGN2P23-201ENST00000456759 269 ntBASIC2.05□□□□□ -2.08
SOX18P35713 snoU13.11-201ENST00000459219 104 ntBASIC2.05□□□□□ -2.08
SOX18P35713 SNORA25.13-201ENST00000516395 103 ntBASIC2.05□□□□□ -2.08
SOX18P35713 AP003716.2-201ENST00000528260 108 ntBASIC2.05□□□□□ -2.08
SOX18P35713 MIR1273D-201ENST00000577266 86 ntBASIC2.05□□□□□ -2.08
SOX18P35713 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SOX18P35713 RNA5SP99-201ENST00000364020 114 ntBASIC2.04□□□□□ -2.08
SOX18P35713 Y_RNA.508-201ENST00000384502 114 ntBASIC2.04□□□□□ -2.08
SOX18P35713 RNU6-1254P-201ENST00000391266 104 ntBASIC2.04□□□□□ -2.08
SOX18P35713 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SOX18P35713 RNU6-65P-201ENST00000516332 98 ntBASIC2.04□□□□□ -2.08
SOX18P35713 MIR4536-1-201ENST00000583537 88 ntBASIC2.04□□□□□ -2.08
SOX18P35713 AC103810.8-201ENST00000607347 118 ntBASIC2.04□□□□□ -2.08
SOX18P35713 SNORD114-1-201ENST00000362705 72 ntBASIC2.03□□□□□ -2.08
SOX18P35713 SNORD1A-201ENST00000364968 72 ntBASIC2.03□□□□□ -2.08
SOX18P35713 SNORA67.3-201ENST00000384366 140 ntBASIC2.03□□□□□ -2.08
SOX18P35713 MIR17-201ENST00000385012 84 ntBASIC2.03□□□□□ -2.08
SOX18P35713 MIR30A-201ENST00000385092 71 ntBASIC2.03□□□□□ -2.08
SOX18P35713 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.03□□□□□ -2.08
SOX18P35713 RNA5SP247-201ENST00000411181 105 ntBASIC2.03□□□□□ -2.08
SOX18P35713 RNA5SP458-201ENST00000516188 119 ntBASIC2.03□□□□□ -2.08
SOX18P35713 RNA5SP200-201ENST00000516360 103 ntBASIC2.03□□□□□ -2.08
SOX18P35713 SNORA44.1-201ENST00000517031 108 ntBASIC2.03□□□□□ -2.08
SOX18P35713 AL353997.5-201ENST00000618886 171 ntBASIC2.03□□□□□ -2.08
SOX18P35713 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
SOX18P35713 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SOX18P35713 MIR101-2-201ENST00000362195 79 ntBASIC2.02□□□□□ -2.09
SOX18P35713 RNU1-36P-201ENST00000365130 165 ntBASIC2.02□□□□□ -2.09
SOX18P35713 MIR18B-201ENST00000454574 71 ntBASIC2.02□□□□□ -2.09
SOX18P35713 AC121758.2-201ENST00000553271 193 ntBASIC2.02□□□□□ -2.09
SOX18P35713 AP000553.5-201ENST00000641933 54 ntBASIC2.02□□□□□ -2.09
SOX18P35713 AL359851.1-201ENST00000569460 4997 ntBASIC2.01□□□□□ -2.09
SOX18P35713 AC023934.1-201ENST00000574529 2389 ntBASIC2.01□□□□□ -2.09
SOX18P35713 Y_RNA.330-201ENST00000365230 109 ntBASIC2.01□□□□□ -2.09
SOX18P35713 RNU6-811P-201ENST00000384069 107 ntBASIC2.01□□□□□ -2.09
SOX18P35713 RNU6-129P-201ENST00000391022 107 ntBASIC2.01□□□□□ -2.09
SOX18P35713 RNA5SP338-201ENST00000410495 85 ntBASIC2.01□□□□□ -2.09
SOX18P35713 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.01□□□□□ -2.09
SOX18P35713 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.01□□□□□ -2.09
SOX18P35713 MIR302D-201ENST00000362275 68 ntBASIC2□□□□□ -2.09
SOX18P35713 SNORD33-201ENST00000362761 85 ntBASIC2□□□□□ -2.09
SOX18P35713 SNORD36A-201ENST00000362874 73 ntBASIC2□□□□□ -2.09
SOX18P35713 SNORA64-201ENST00000384674 134 ntBASIC2□□□□□ -2.09
SOX18P35713 SNORA48.3-201ENST00000391081 134 ntBASIC2□□□□□ -2.09
SOX18P35713 RNU6-466P-201ENST00000391224 103 ntBASIC2□□□□□ -2.09
SOX18P35713 Y_RNA.588-201ENST00000391254 102 ntBASIC2□□□□□ -2.09
SOX18P35713 MIR1257-201ENST00000408490 117 ntBASIC2□□□□□ -2.09
SOX18P35713 AL356379.1-201ENST00000414105 126 ntBASIC2□□□□□ -2.09
SOX18P35713 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2□□□□□ -2.09
SOX18P35713 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2□□□□□ -2.09
SOX18P35713 MIR4796-201ENST00000580742 81 ntBASIC2□□□□□ -2.09
SOX18P35713 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2□□□□□ -2.09
SOX18P35713 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2□□□□□ -2.09
SOX18P35713 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2□□□□□ -2.09
SOX18P35713 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.99□□□□□ -2.09
SOX18P35713 SNORD63B-201ENST00000411005 70 ntBASIC1.99□□□□□ -2.09
SOX18P35713 HMGN2P19-201ENST00000425149 265 ntBASIC1.99□□□□□ -2.09
SOX18P35713 AL450471.1-201ENST00000447509 127 ntBASIC1.99□□□□□ -2.09
SOX18P35713 RNU6-717P-201ENST00000459076 104 ntBASIC1.99□□□□□ -2.09
SOX18P35713 MIR3664-201ENST00000579074 99 ntBASIC1.99□□□□□ -2.09
SOX18P35713 MIR6840-201ENST00000611937 71 ntBASIC1.99□□□□□ -2.09
SOX18P35713 Y_RNA.283-201ENST00000364798 112 ntBASIC1.98□□□□□ -2.09
SOX18P35713 RNU6-580P-201ENST00000365159 107 ntBASIC1.98□□□□□ -2.09
SOX18P35713 SNORD83.1-201ENST00000411362 77 ntBASIC1.98□□□□□ -2.09
SOX18P35713 RNU7-185P-201ENST00000459215 60 ntBASIC1.98□□□□□ -2.09
SOX18P35713 snoU13.21-201ENST00000459368 105 ntBASIC1.98□□□□□ -2.09
SOX18P35713 RNU7-106P-201ENST00000459514 67 ntBASIC1.98□□□□□ -2.09
SOX18P35713 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.98□□□□□ -2.09
SOX18P35713 MIR6873-201ENST00000622788 63 ntBASIC1.98□□□□□ -2.09
SOX18P35713 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
SOX18P35713 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.97□□□□□ -2.09
SOX18P35713 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
SOX18P35713 RNU6-315P-201ENST00000362666 107 ntBASIC1.97□□□□□ -2.09
SOX18P35713 RNA5SP37-201ENST00000365420 130 ntBASIC1.97□□□□□ -2.09
SOX18P35713 RNA5SP292-201ENST00000390974 118 ntBASIC1.97□□□□□ -2.09
SOX18P35713 AC073261.1-201ENST00000429409 121 ntBASIC1.97□□□□□ -2.09
SOX18P35713 RPL23AP42-201ENST00000471152 471 ntBASIC1.97□□□□□ -2.09
SOX18P35713 RNU6-165P-201ENST00000517170 99 ntBASIC1.97□□□□□ -2.09
SOX18P35713 AC013244.2-201ENST00000603396 103 ntBASIC1.97□□□□□ -2.09
SOX18P35713 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SOX18P35713 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SOX18P35713 RNA5SP160-201ENST00000364866 120 ntBASIC1.96□□□□□ -2.1
SOX18P35713 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SOX18P35713 SNORD100-201ENST00000408573 76 ntBASIC1.96□□□□□ -2.1
SOX18P35713 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SOX18P35713 RNU6-478P-201ENST00000363904 110 ntBASIC1.95□□□□□ -2.1
SOX18P35713 MIR635-201ENST00000384830 98 ntBASIC1.95□□□□□ -2.1
SOX18P35713 AC015818.7-201ENST00000428754 109 ntBASIC1.95□□□□□ -2.1
SOX18P35713 AC090255.1-201ENST00000495779 349 ntBASIC1.95□□□□□ -2.1
SOX18P35713 AL512310.8-201ENST00000550183 120 ntBASIC1.95□□□□□ -2.1
SOX18P35713 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
SOX18P35713 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SOX18P35713 Y_RNA.13-201ENST00000362403 112 ntBASIC1.94□□□□□ -2.1
SOX18P35713 RNU6-1094P-201ENST00000362416 104 ntBASIC1.94□□□□□ -2.1
SOX18P35713 Y_RNA.338-201ENST00000365320 114 ntBASIC1.94□□□□□ -2.1
SOX18P35713 Y_RNA.536-201ENST00000384621 113 ntBASIC1.94□□□□□ -2.1
SOX18P35713 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SOX18P35713 MIR676-201ENST00000390702 67 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 229.1 ms