Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 RNU6-41P-201ENST00000384741 107 ntBASIC1.25□□□□□ -2.21
PTPN7P35236 MIR1257-201ENST00000408490 117 ntBASIC1.25□□□□□ -2.21
PTPN7P35236 Y_RNA.601-201ENST00000410500 113 ntBASIC1.25□□□□□ -2.21
PTPN7P35236 AC015712.3-201ENST00000559380 164 ntBASIC1.25□□□□□ -2.21
PTPN7P35236 U6.109-201ENST00000636749 87 ntBASIC1.25□□□□□ -2.21
PTPN7P35236 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
PTPN7P35236 Y_RNA.140-201ENST00000363474 103 ntBASIC1.24□□□□□ -2.21
PTPN7P35236 Y_RNA.495-201ENST00000384435 112 ntBASIC1.24□□□□□ -2.21
PTPN7P35236 MIR125B2-201ENST00000385128 89 ntBASIC1.24□□□□□ -2.21
PTPN7P35236 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.24□□□□□ -2.21
PTPN7P35236 RNU6-109P-201ENST00000516364 107 ntBASIC1.24□□□□□ -2.21
PTPN7P35236 RNU6-184P-201ENST00000516514 107 ntBASIC1.24□□□□□ -2.21
PTPN7P35236 AC019288.1-201ENST00000557918 224 ntBASIC1.24□□□□□ -2.21
PTPN7P35236 Y_RNA.818-201ENST00000618813 71 ntBASIC1.24□□□□□ -2.21
PTPN7P35236 Y_RNA.119-201ENST00000363301 96 ntBASIC1.23□□□□□ -2.21
PTPN7P35236 SNORD38.1-201ENST00000363863 68 ntBASIC1.23□□□□□ -2.21
PTPN7P35236 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.23□□□□□ -2.21
PTPN7P35236 RNU6-994P-201ENST00000410507 111 ntBASIC1.23□□□□□ -2.21
PTPN7P35236 RPS29P28-201ENST00000446439 141 ntBASIC1.23□□□□□ -2.21
PTPN7P35236 snoU13.23-201ENST00000458863 104 ntBASIC1.23□□□□□ -2.21
PTPN7P35236 RNU7-95P-201ENST00000459222 64 ntBASIC1.23□□□□□ -2.21
PTPN7P35236 SCARNA23-201ENST00000516060 130 ntBASIC1.23□□□□□ -2.21
PTPN7P35236 RNU6-168P-201ENST00000516189 101 ntBASIC1.23□□□□□ -2.21
PTPN7P35236 SNORA25.16-201ENST00000516741 121 ntBASIC1.23□□□□□ -2.21
PTPN7P35236 MIR4676-201ENST00000583078 72 ntBASIC1.23□□□□□ -2.21
PTPN7P35236 MIR8066-201ENST00000617280 78 ntBASIC1.23□□□□□ -2.21
PTPN7P35236 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
PTPN7P35236 HSBP1P2-201ENST00000299671 229 ntBASIC1.22□□□□□ -2.21
PTPN7P35236 Y_RNA.10-201ENST00000362371 110 ntBASIC1.22□□□□□ -2.21
PTPN7P35236 SNORA25.8-201ENST00000364831 128 ntBASIC1.22□□□□□ -2.21
PTPN7P35236 RNA5SP89-201ENST00000410300 108 ntBASIC1.22□□□□□ -2.21
PTPN7P35236 RNU4-83P-201ENST00000410863 133 ntBASIC1.22□□□□□ -2.21
PTPN7P35236 AC108667.1-201ENST00000428618 249 ntBASIC1.22□□□□□ -2.21
PTPN7P35236 RNA5SP404-201ENST00000517118 132 ntBASIC1.22□□□□□ -2.21
PTPN7P35236 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.22□□□□□ -2.21
PTPN7P35236 MIR6715A-201ENST00000615929 79 ntBASIC1.22□□□□□ -2.21
PTPN7P35236 AP001318.4-201ENST00000616637 121 ntBASIC1.22□□□□□ -2.21
PTPN7P35236 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.22□□□□□ -2.21
PTPN7P35236 RNU6-403P-201ENST00000363163 104 ntBASIC1.21□□□□□ -2.22
PTPN7P35236 RNU1-124P-201ENST00000363861 145 ntBASIC1.21□□□□□ -2.22
PTPN7P35236 Y_RNA.466-201ENST00000384294 113 ntBASIC1.21□□□□□ -2.22
PTPN7P35236 Y_RNA.544-201ENST00000384650 113 ntBASIC1.21□□□□□ -2.22
PTPN7P35236 MIR1827-201ENST00000408549 66 ntBASIC1.21□□□□□ -2.22
PTPN7P35236 AC108210.2-201ENST00000503681 201 ntBASIC1.21□□□□□ -2.22
PTPN7P35236 AC090897.1-201ENST00000580909 226 ntBASIC1.21□□□□□ -2.22
PTPN7P35236 AC096720.1-201ENST00000604441 183 ntBASIC1.21□□□□□ -2.22
PTPN7P35236 AC091304.10-201ENST00000641554 121 ntBASIC1.21□□□□□ -2.22
PTPN7P35236 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
PTPN7P35236 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
PTPN7P35236 Y_RNA.348-201ENST00000365403 103 ntBASIC1.2□□□□□ -2.22
PTPN7P35236 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
PTPN7P35236 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
PTPN7P35236 MIR548G-201ENST00000408442 89 ntBASIC1.2□□□□□ -2.22
PTPN7P35236 RNU6-531P-201ENST00000516694 104 ntBASIC1.2□□□□□ -2.22
PTPN7P35236 MIR4804-201ENST00000581683 73 ntBASIC1.2□□□□□ -2.22
PTPN7P35236 SNORD92-201ENST00000585078 85 ntBASIC1.2□□□□□ -2.22
PTPN7P35236 MIR6082-201ENST00000613604 109 ntBASIC1.2□□□□□ -2.22
PTPN7P35236 AC012531.4-201ENST00000616509 177 ntBASIC1.2□□□□□ -2.22
PTPN7P35236 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
PTPN7P35236 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
PTPN7P35236 MIR1-1-201ENST00000362147 71 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 Y_RNA.13-201ENST00000362403 112 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 Y_RNA.42-201ENST00000362660 108 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 RNU6-170P-201ENST00000362832 104 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 SNORA7.1-201ENST00000363750 139 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 RNU6-1163P-201ENST00000364516 107 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 SNORD45B-201ENST00000364617 72 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 SNORD38.2-201ENST00000384470 69 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 RNU7-56P-201ENST00000458744 62 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 SNORD124-201ENST00000459577 104 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 Y_RNA.659-201ENST00000515994 113 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 RNU6-795P-201ENST00000516323 103 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 RNU6-158P-201ENST00000517104 100 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 RNU7-156P-201ENST00000517214 74 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 MIR4500-201ENST00000579472 76 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 MIR4777-201ENST00000583710 86 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 MIR548Z-201ENST00000584743 97 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 AC104984.5-201ENST00000586878 94 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 AL353997.5-201ENST00000618886 171 ntBASIC1.19□□□□□ -2.22
PTPN7P35236 Y_RNA.93-201ENST00000363066 109 ntBASIC1.18□□□□□ -2.22
PTPN7P35236 Y_RNA.95-201ENST00000363079 95 ntBASIC1.18□□□□□ -2.22
PTPN7P35236 MIR100-201ENST00000385259 80 ntBASIC1.18□□□□□ -2.22
PTPN7P35236 MIR618-201ENST00000385287 98 ntBASIC1.18□□□□□ -2.22
PTPN7P35236 MIR938-201ENST00000401216 83 ntBASIC1.18□□□□□ -2.22
PTPN7P35236 RNU6-90P-201ENST00000606352 106 ntBASIC1.18□□□□□ -2.22
PTPN7P35236 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
PTPN7P35236 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
PTPN7P35236 RNU4-58P-201ENST00000363192 141 ntBASIC1.17□□□□□ -2.22
PTPN7P35236 RNU6-640P-201ENST00000363693 105 ntBASIC1.17□□□□□ -2.22
PTPN7P35236 Y_RNA.173-201ENST00000363776 113 ntBASIC1.17□□□□□ -2.22
PTPN7P35236 RNU6-905P-201ENST00000384434 107 ntBASIC1.17□□□□□ -2.22
PTPN7P35236 SNORA72.6-201ENST00000384520 129 ntBASIC1.17□□□□□ -2.22
PTPN7P35236 MIR200A-201ENST00000384875 90 ntBASIC1.17□□□□□ -2.22
PTPN7P35236 AC004941.2-201ENST00000427009 228 ntBASIC1.17□□□□□ -2.22
PTPN7P35236 AC109327.2-201ENST00000448339 378 ntBASIC1.17□□□□□ -2.22
PTPN7P35236 SNRPGP12-201ENST00000449481 213 ntBASIC1.17□□□□□ -2.22
PTPN7P35236 AC067940.1-201ENST00000458411 300 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms