Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.02□□□□□ -2.09
LIG1P18858 snoU13.9-201ENST00000458927 103 ntBASIC2.01□□□□□ -2.09
LIG1P18858 RNU6-947P-201ENST00000516264 106 ntBASIC2.01□□□□□ -2.09
LIG1P18858 RNU6-548P-201ENST00000517083 115 ntBASIC2.01□□□□□ -2.09
LIG1P18858 AC020891.4-201ENST00000605745 93 ntBASIC2.01□□□□□ -2.09
LIG1P18858 AC084768.2-201ENST00000622736 221 ntBASIC2.01□□□□□ -2.09
LIG1P18858 MIR548BB-201ENST00000626714 66 ntBASIC2.01□□□□□ -2.09
LIG1P18858 MIR377-201ENST00000362145 69 ntBASIC2□□□□□ -2.09
LIG1P18858 Y_RNA.4-201ENST00000362333 112 ntBASIC2□□□□□ -2.09
LIG1P18858 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2□□□□□ -2.09
LIG1P18858 RNU6-1165P-201ENST00000410119 107 ntBASIC2□□□□□ -2.09
LIG1P18858 RPL30P7-201ENST00000479312 323 ntBASIC2□□□□□ -2.09
LIG1P18858 RNA5SP182-201ENST00000516064 82 ntBASIC2□□□□□ -2.09
LIG1P18858 AC025521.1-201ENST00000621624 286 ntBASIC2□□□□□ -2.09
LIG1P18858 MIR6516-201ENST00000630554 81 ntBASIC2□□□□□ -2.09
LIG1P18858 AC006160.2-201ENST00000637708 154 ntBASIC2□□□□□ -2.09
LIG1P18858 AC008163.1-202ENST00000636004 2889 ntBASIC1.99□□□□□ -2.09
LIG1P18858 RNA5SP133-201ENST00000363368 119 ntBASIC1.99□□□□□ -2.09
LIG1P18858 SNORD1A-201ENST00000364968 72 ntBASIC1.99□□□□□ -2.09
LIG1P18858 RNA5SP363-201ENST00000365072 115 ntBASIC1.99□□□□□ -2.09
LIG1P18858 RNU6-997P-201ENST00000384725 107 ntBASIC1.99□□□□□ -2.09
LIG1P18858 MT-TF-201ENST00000387314 71 ntBASIC1.99□□□□□ -2.09
LIG1P18858 MIR1185-1-201ENST00000408598 86 ntBASIC1.99□□□□□ -2.09
LIG1P18858 Y_RNA.611-201ENST00000410682 108 ntBASIC1.99□□□□□ -2.09
LIG1P18858 SNRPGP12-201ENST00000449481 213 ntBASIC1.99□□□□□ -2.09
LIG1P18858 RNU7-62P-201ENST00000458856 62 ntBASIC1.99□□□□□ -2.09
LIG1P18858 AC005908.1-201ENST00000468701 347 ntBASIC1.99□□□□□ -2.09
LIG1P18858 AC090897.1-201ENST00000580909 226 ntBASIC1.99□□□□□ -2.09
LIG1P18858 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LIG1P18858 RNA5SP264-201ENST00000363115 107 ntBASIC1.98□□□□□ -2.09
LIG1P18858 Y_RNA.191-201ENST00000363972 113 ntBASIC1.98□□□□□ -2.09
LIG1P18858 RNA5SP99-201ENST00000364020 114 ntBASIC1.98□□□□□ -2.09
LIG1P18858 RNU6-205P-201ENST00000390858 107 ntBASIC1.98□□□□□ -2.09
LIG1P18858 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.98□□□□□ -2.09
LIG1P18858 AC015712.3-201ENST00000559380 164 ntBASIC1.98□□□□□ -2.09
LIG1P18858 MIR8066-201ENST00000617280 78 ntBASIC1.98□□□□□ -2.09
LIG1P18858 MIR8063-201ENST00000621930 81 ntBASIC1.98□□□□□ -2.09
LIG1P18858 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.98□□□□□ -2.09
LIG1P18858 SNORD33-201ENST00000362761 85 ntBASIC1.97□□□□□ -2.09
LIG1P18858 RNU6-580P-201ENST00000365159 107 ntBASIC1.97□□□□□ -2.09
LIG1P18858 RNU6-571P-201ENST00000384128 107 ntBASIC1.97□□□□□ -2.09
LIG1P18858 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.97□□□□□ -2.09
LIG1P18858 RNU6-482P-201ENST00000391068 107 ntBASIC1.97□□□□□ -2.09
LIG1P18858 Y_RNA.607-201ENST00000410597 98 ntBASIC1.97□□□□□ -2.09
LIG1P18858 RNA5SP225-201ENST00000410874 135 ntBASIC1.97□□□□□ -2.09
LIG1P18858 MIR4500-201ENST00000579472 76 ntBASIC1.97□□□□□ -2.09
LIG1P18858 MIR4422-201ENST00000581938 83 ntBASIC1.97□□□□□ -2.09
LIG1P18858 U6.109-201ENST00000636749 87 ntBASIC1.97□□□□□ -2.09
LIG1P18858 MIR103A2-201ENST00000362154 78 ntBASIC1.96□□□□□ -2.1
LIG1P18858 Y_RNA.437-201ENST00000384113 113 ntBASIC1.96□□□□□ -2.1
LIG1P18858 RNU6-279P-201ENST00000391297 101 ntBASIC1.96□□□□□ -2.1
LIG1P18858 SNORA25.15-201ENST00000516487 89 ntBASIC1.96□□□□□ -2.1
LIG1P18858 Y_RNA.119-201ENST00000363301 96 ntBASIC1.95□□□□□ -2.1
LIG1P18858 Y_RNA.313-201ENST00000365095 103 ntBASIC1.95□□□□□ -2.1
LIG1P18858 SNORA26.9-201ENST00000391322 122 ntBASIC1.95□□□□□ -2.1
LIG1P18858 AC245517.4-201ENST00000448601 281 ntBASIC1.95□□□□□ -2.1
LIG1P18858 AC079140.2-201ENST00000506193 142 ntBASIC1.95□□□□□ -2.1
LIG1P18858 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.95□□□□□ -2.1
LIG1P18858 uc_338.6-201ENST00000613544 171 ntBASIC1.95□□□□□ -2.1
LIG1P18858 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
LIG1P18858 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LIG1P18858 RNU4-83P-201ENST00000410863 133 ntBASIC1.94□□□□□ -2.1
LIG1P18858 RNU6-850P-201ENST00000516934 103 ntBASIC1.94□□□□□ -2.1
LIG1P18858 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.94□□□□□ -2.1
LIG1P18858 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
LIG1P18858 SNORD115-27-201ENST00000364430 82 ntBASIC1.93□□□□□ -2.1
LIG1P18858 MIR519C-201ENST00000385053 87 ntBASIC1.93□□□□□ -2.1
LIG1P18858 MIR18B-201ENST00000454574 71 ntBASIC1.93□□□□□ -2.1
LIG1P18858 MIR3664-201ENST00000579074 99 ntBASIC1.93□□□□□ -2.1
LIG1P18858 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.93□□□□□ -2.1
LIG1P18858 Y_RNA.57-201ENST00000362806 113 ntBASIC1.92□□□□□ -2.1
LIG1P18858 RNU6-1065P-201ENST00000384513 106 ntBASIC1.92□□□□□ -2.1
LIG1P18858 AC087499.7-201ENST00000441958 109 ntBASIC1.92□□□□□ -2.1
LIG1P18858 AL353997.5-201ENST00000618886 171 ntBASIC1.92□□□□□ -2.1
LIG1P18858 RNU1-17P-201ENST00000363022 152 ntBASIC1.91□□□□□ -2.1
LIG1P18858 RNU6-654P-201ENST00000364373 107 ntBASIC1.91□□□□□ -2.1
LIG1P18858 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.91□□□□□ -2.1
LIG1P18858 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.91□□□□□ -2.1
LIG1P18858 RNU6-519P-201ENST00000410590 108 ntBASIC1.91□□□□□ -2.1
LIG1P18858 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.91□□□□□ -2.1
LIG1P18858 AL512598.1-201ENST00000610158 273 ntBASIC1.91□□□□□ -2.1
LIG1P18858 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.1
LIG1P18858 RNU6-524P-201ENST00000384270 107 ntBASIC1.9□□□□□ -2.11
LIG1P18858 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
LIG1P18858 RNU1-78P-201ENST00000391248 165 ntBASIC1.9□□□□□ -2.11
LIG1P18858 SNORD4B-201ENST00000459083 72 ntBASIC1.9□□□□□ -2.11
LIG1P18858 SNORD13-201ENST00000459299 104 ntBASIC1.9□□□□□ -2.11
LIG1P18858 RNU6-165P-201ENST00000517170 99 ntBASIC1.9□□□□□ -2.11
LIG1P18858 AC019176.1-201ENST00000518519 225 ntBASIC1.9□□□□□ -2.11
LIG1P18858 MIR4491-201ENST00000581087 68 ntBASIC1.9□□□□□ -2.11
LIG1P18858 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LIG1P18858 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
LIG1P18858 RNA5SP190-201ENST00000365222 118 ntBASIC1.89□□□□□ -2.11
LIG1P18858 BX276092.1-201ENST00000427368 251 ntBASIC1.89□□□□□ -2.11
LIG1P18858 AC093729.1-201ENST00000513074 128 ntBASIC1.89□□□□□ -2.11
LIG1P18858 RNU6-857P-201ENST00000515893 110 ntBASIC1.89□□□□□ -2.11
LIG1P18858 MIR3937-201ENST00000580135 106 ntBASIC1.89□□□□□ -2.11
LIG1P18858 AL161722.3-201ENST00000605789 2983 ntBASIC1.89□□□□□ -2.11
LIG1P18858 Y_RNA.244-201ENST00000364484 109 ntBASIC1.88□□□□□ -2.11
LIG1P18858 Y_RNA.588-201ENST00000391254 102 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms