Protein–RNA interactions for Protein: P10600

TGFB3, Transforming growth factor beta-3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3P10600 Y_RNA.448-201ENST00000384185 108 ntBASIC1.3□□□□□ -2.2
TGFB3P10600 MIR1185-1-201ENST00000408598 86 ntBASIC1.3□□□□□ -2.2
TGFB3P10600 Y_RNA.601-201ENST00000410500 113 ntBASIC1.3□□□□□ -2.2
TGFB3P10600 RNU6-1086P-201ENST00000410930 100 ntBASIC1.3□□□□□ -2.2
TGFB3P10600 snoU13.21-201ENST00000459368 105 ntBASIC1.3□□□□□ -2.2
TGFB3P10600 RNU7-79P-201ENST00000516082 62 ntBASIC1.3□□□□□ -2.2
TGFB3P10600 RNU7-2P-201ENST00000516096 62 ntBASIC1.3□□□□□ -2.2
TGFB3P10600 RNU6-158P-201ENST00000517104 100 ntBASIC1.3□□□□□ -2.2
TGFB3P10600 RNU6-165P-201ENST00000517170 99 ntBASIC1.3□□□□□ -2.2
TGFB3P10600 AP003716.2-201ENST00000528260 108 ntBASIC1.3□□□□□ -2.2
TGFB3P10600 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.3□□□□□ -2.2
TGFB3P10600 RNU6-1313P-201ENST00000362622 102 ntBASIC1.29□□□□□ -2.2
TGFB3P10600 RNA5SP173-201ENST00000364857 136 ntBASIC1.29□□□□□ -2.2
TGFB3P10600 SNORA25-201ENST00000384384 134 ntBASIC1.29□□□□□ -2.2
TGFB3P10600 Y_RNA.507-201ENST00000384500 99 ntBASIC1.29□□□□□ -2.2
TGFB3P10600 MIR222-201ENST00000384992 110 ntBASIC1.29□□□□□ -2.2
TGFB3P10600 RNU6-205P-201ENST00000390858 107 ntBASIC1.29□□□□□ -2.2
TGFB3P10600 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.29□□□□□ -2.2
TGFB3P10600 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.29□□□□□ -2.2
TGFB3P10600 AC026421.1-201ENST00000519101 163 ntBASIC1.29□□□□□ -2.2
TGFB3P10600 MIR3152-201ENST00000579801 74 ntBASIC1.29□□□□□ -2.2
TGFB3P10600 MIR4295-201ENST00000585286 85 ntBASIC1.29□□□□□ -2.2
TGFB3P10600 FAM71BP1-201ENST00000604431 523 ntBASIC1.29□□□□□ -2.2
TGFB3P10600 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
TGFB3P10600 RNU1-124P-201ENST00000363861 145 ntBASIC1.28□□□□□ -2.2
TGFB3P10600 Y_RNA.191-201ENST00000363972 113 ntBASIC1.28□□□□□ -2.2
TGFB3P10600 RNU6-1113P-201ENST00000384348 107 ntBASIC1.28□□□□□ -2.2
TGFB3P10600 AC015818.7-201ENST00000428754 109 ntBASIC1.28□□□□□ -2.2
TGFB3P10600 AC087499.7-201ENST00000441958 109 ntBASIC1.28□□□□□ -2.2
TGFB3P10600 AC087343.1-201ENST00000477341 475 ntBASIC1.28□□□□□ -2.2
TGFB3P10600 RNU6-947P-201ENST00000516264 106 ntBASIC1.28□□□□□ -2.2
TGFB3P10600 SNORA72.7-201ENST00000516349 94 ntBASIC1.28□□□□□ -2.2
TGFB3P10600 AC141846.1-201ENST00000568348 142 ntBASIC1.28□□□□□ -2.2
TGFB3P10600 MIR4452-201ENST00000583004 71 ntBASIC1.28□□□□□ -2.2
TGFB3P10600 MIR6516-201ENST00000630554 81 ntBASIC1.28□□□□□ -2.2
TGFB3P10600 Y_RNA.17-201ENST00000362433 111 ntBASIC1.27□□□□□ -2.21
TGFB3P10600 Y_RNA.95-201ENST00000363079 95 ntBASIC1.27□□□□□ -2.21
TGFB3P10600 RNU4-36P-201ENST00000364294 144 ntBASIC1.27□□□□□ -2.21
TGFB3P10600 Y_RNA.377-201ENST00000365644 108 ntBASIC1.27□□□□□ -2.21
TGFB3P10600 SNORA26.2-201ENST00000390922 122 ntBASIC1.27□□□□□ -2.21
TGFB3P10600 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.27□□□□□ -2.21
TGFB3P10600 Y_RNA.659-201ENST00000515994 113 ntBASIC1.27□□□□□ -2.21
TGFB3P10600 RNA5SP404-201ENST00000517118 132 ntBASIC1.27□□□□□ -2.21
TGFB3P10600 RNU6-86P-201ENST00000606534 107 ntBASIC1.27□□□□□ -2.21
TGFB3P10600 MIR96-201ENST00000362288 78 ntBASIC1.26□□□□□ -2.21
TGFB3P10600 RNU1-93P-201ENST00000364704 169 ntBASIC1.26□□□□□ -2.21
TGFB3P10600 Y_RNA.299-201ENST00000364973 94 ntBASIC1.26□□□□□ -2.21
TGFB3P10600 AL451046.2-201ENST00000403074 277 ntBASIC1.26□□□□□ -2.21
TGFB3P10600 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.26□□□□□ -2.21
TGFB3P10600 MIR4661-201ENST00000582720 75 ntBASIC1.26□□□□□ -2.21
TGFB3P10600 AC103810.7-201ENST00000607821 91 ntBASIC1.26□□□□□ -2.21
TGFB3P10600 AL662814.1-201ENST00000617364 121 ntBASIC1.26□□□□□ -2.21
TGFB3P10600 MIR1245B-201ENST00000636115 69 ntBASIC1.26□□□□□ -2.21
TGFB3P10600 AL512310.12-203ENST00000640543 90 ntBASIC1.26□□□□□ -2.21
TGFB3P10600 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
TGFB3P10600 MIR30D-201ENST00000362283 70 ntBASIC1.25□□□□□ -2.21
TGFB3P10600 Y_RNA.363-201ENST00000365529 113 ntBASIC1.25□□□□□ -2.21
TGFB3P10600 MIR518E-201ENST00000385252 88 ntBASIC1.25□□□□□ -2.21
TGFB3P10600 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
TGFB3P10600 SNORD77B-201ENST00000391112 67 ntBASIC1.25□□□□□ -2.21
TGFB3P10600 RNU6-613P-201ENST00000410412 108 ntBASIC1.25□□□□□ -2.21
TGFB3P10600 RNU4-83P-201ENST00000410863 133 ntBASIC1.25□□□□□ -2.21
TGFB3P10600 AL591704.2-201ENST00000421658 181 ntBASIC1.25□□□□□ -2.21
TGFB3P10600 RN7SKP12-201ENST00000516275 143 ntBASIC1.25□□□□□ -2.21
TGFB3P10600 Y_RNA.220-201ENST00000364244 109 ntBASIC1.24□□□□□ -2.21
TGFB3P10600 RNU6-219P-201ENST00000364728 107 ntBASIC1.24□□□□□ -2.21
TGFB3P10600 SNORD114-22-201ENST00000365423 72 ntBASIC1.24□□□□□ -2.21
TGFB3P10600 Y_RNA.558-201ENST00000384685 113 ntBASIC1.24□□□□□ -2.21
TGFB3P10600 MIR588-201ENST00000384900 83 ntBASIC1.24□□□□□ -2.21
TGFB3P10600 MIR563-201ENST00000385080 79 ntBASIC1.24□□□□□ -2.21
TGFB3P10600 U8.15-201ENST00000390947 134 ntBASIC1.24□□□□□ -2.21
TGFB3P10600 RNU6-402P-201ENST00000410678 103 ntBASIC1.24□□□□□ -2.21
TGFB3P10600 RNU6-1018P-201ENST00000516577 106 ntBASIC1.24□□□□□ -2.21
TGFB3P10600 AC027335.2-201ENST00000624030 375 ntBASIC1.24□□□□□ -2.21
TGFB3P10600 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
TGFB3P10600 SNORD115-27-201ENST00000364430 82 ntBASIC1.23□□□□□ -2.21
TGFB3P10600 RNU6-1134P-201ENST00000365156 101 ntBASIC1.23□□□□□ -2.21
TGFB3P10600 RNU6-787P-201ENST00000384032 107 ntBASIC1.23□□□□□ -2.21
TGFB3P10600 snoU13.2-201ENST00000459201 104 ntBASIC1.23□□□□□ -2.21
TGFB3P10600 SNORA70.22-201ENST00000517160 124 ntBASIC1.23□□□□□ -2.21
TGFB3P10600 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.23□□□□□ -2.21
TGFB3P10600 AC138749.4-201ENST00000563970 127 ntBASIC1.23□□□□□ -2.21
TGFB3P10600 RNU6-1244P-201ENST00000363614 108 ntBASIC1.22□□□□□ -2.21
TGFB3P10600 Y_RNA.224-201ENST00000364308 111 ntBASIC1.22□□□□□ -2.21
TGFB3P10600 SNORD38B-201ENST00000384690 67 ntBASIC1.22□□□□□ -2.21
TGFB3P10600 SNORD12-201ENST00000391002 90 ntBASIC1.22□□□□□ -2.21
TGFB3P10600 RNU6-972P-201ENST00000391208 107 ntBASIC1.22□□□□□ -2.21
TGFB3P10600 MIR1302-4-201ENST00000408701 150 ntBASIC1.22□□□□□ -2.21
TGFB3P10600 RNA5SP261-201ENST00000410536 106 ntBASIC1.22□□□□□ -2.21
TGFB3P10600 AL133373.1-201ENST00000497098 94 ntBASIC1.22□□□□□ -2.21
TGFB3P10600 AC090897.1-201ENST00000580909 226 ntBASIC1.22□□□□□ -2.21
TGFB3P10600 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.22□□□□□ -2.21
TGFB3P10600 AC025521.1-201ENST00000621624 286 ntBASIC1.22□□□□□ -2.21
TGFB3P10600 SNORD38B-202ENST00000625943 69 ntBASIC1.22□□□□□ -2.21
TGFB3P10600 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TGFB3P10600 RNU6-1152P-201ENST00000384576 107 ntBASIC1.21□□□□□ -2.22
TGFB3P10600 SNORA2B-201ENST00000384583 137 ntBASIC1.21□□□□□ -2.22
TGFB3P10600 RNU7-48P-201ENST00000458875 63 ntBASIC1.21□□□□□ -2.22
TGFB3P10600 OR2A41P-201ENST00000473586 105 ntBASIC1.21□□□□□ -2.22
TGFB3P10600 AC048334.1-201ENST00000477975 159 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 249.7 ms